EY692485

Overview
NameEY692485
Unique NameEY692485
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length889
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692485 vs. ExPASy Swiss-Prot
Match: ARP6_CAEEL (Actin-like protein C08B11.6 OS=Caenorhabditis elegans GN=C08B11.6 PE=2 SV=3)

HSP 1 Score: 78.5666 bits (192), Expect = 5.397e-14
Identity = 54/200 (27.00%), Postives = 95/200 (47.50%), Query Frame = -3
Query:  189 IVRDMKEKLAYIALDYXQELETSKTS--------------------SAVEKSYELXDGQV--ITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKV---VAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF*TVHQ*D 713
            ++ + KE L +++ ++ + ++ ++                        V+   E  D Q+  I +G ERF  PE+LF PS I ++  G+ E    SI +C   +R  L  NI++ GGS+ FPG  +R+ +E+ ++ P+   + V   V  P+     W  G  L  L+  +  WI + ++DE G S+     F T+ Q D
Sbjct:  201 VINECKEDLCFVSQNFDESMKEARNRFQENTTMKRYIMPDFHSTFRGVVKDVKEPHDPQIPSIHLGVERFAIPEILFNPSDIDIDQCGVAEAVIESICQCPEALRPALAENIIVIGGSSCFPGFRERLEREVRSMLPAEYGLNVSNDVINPQT--HSWHCGQEL--LTASKVPWINRKDWDERGDSLEFSNFFQTLVQSD 396          
BLAST of EY692485 vs. ExPASy Swiss-Prot
Match: ARP5_AEDAE (Actin-related protein 5 OS=Aedes aegypti GN=Arp5 PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.202e-13
Identity = 41/117 (35.04%), Postives = 61/117 (52.14%), Query Frame = -3
Query:  237 IGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESG 587
            IG ER R PE+LFQPSMIG++ AG+  T    +     + +  L GN++L+GG     G  +R+S+E+ A+ P      ++         W G S  A+   F+Q  I +  YDE G
Sbjct:  510 IGVERIRVPEILFQPSMIGVQEAGLTGTIDYVLKLFPKEDQVKLVGNVMLTGGCANIRGFKERLSRELQAILPFQSVYNLMVAGSPSLDAWRGASQFANSQEFKQSLITRQLYDECG 626          
BLAST of EY692485 vs. ExPASy Swiss-Prot
Match: ARP4_DEBHA (Actin-related protein 4 OS=Debaryomyces hansenii GN=ARP4 PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.202e-13
Identity = 39/107 (36.45%), Postives = 65/107 (60.75%), Query Frame = -3
Query:  237 QPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVA---PPERKYSVWIGGSILASLSTFQQMWIAKAEYDESG 548
            +PS    +  G+     +++   D+D+R  +  NI+++GG ++ P + +R+  E+S   P  +KI++ A     ER    WIGGS+LASL TF QMW++K EY+E+G
Sbjct:  377 KPSSKTSQIRGLTHLITHTLSTIDIDLRSSVAHNIIVTGGVSLIPQLTERLYSELSNSNPG-LKIRLHAVGNSSERFNQAWIGGSVLASLGTFHQMWVSKQEYEEAG 482          
BLAST of EY692485 vs. ExPASy Swiss-Prot
Match: ARP3_ARATH (Actin-related protein 3 OS=Arabidopsis thaliana GN=ARP3 PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.678e-13
Identity = 54/185 (29.19%), Postives = 81/185 (43.78%), Query Frame = -3
Query:  228 IVRDMKEKLAYIALDYXQELETSKTSSAVE----KSYELXDGQVIT--IGAERFRCPEVLFQPSMIGME-AAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSM----------------KIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSI 713
            + R +KE   Y   D  +E        A      K  +   G   T  +G ERF  PEV F P +   +    +       I    +D R+ LY NIVLSGGSTMF     R+ +++  +  + +                ++ VV+ P ++++VW GGS+L+S   F      K EY+E G SI
Sbjct:  232 VARKVKEMYCYTCSDIVKEFNKHDKEPAKYIKQWKGVKPKTGAPYTCDVGYERFLGPEVFFNPEIYSNDFTTTLPAVIDKCIQSAPIDTRRALYKNIVLSGGSTMFKDFGRRLQRDLKKIVDARVLANNARTGGEITSQPVEVNVVSHPVQRFAVWFGGSVLSSTPEFFASCRTKEEYEEYGASI 416          
BLAST of EY692485 vs. ExPASy Swiss-Prot
Match: ARP4_CANAL (Actin-related protein 4 OS=Candida albicans GN=ARP4 PE=3 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 2.267e-12
Identity = 38/97 (39.18%), Postives = 59/97 (60.82%), Query Frame = -3
Query:  237 GIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVA---PPERKYSVWIGGSILASLSTFQQMWIAKAEYDESG 518
            GI +   +++   D+D+R  L  NI+++GG ++   + +R+  E+S   P  +KI++ A     ER    WIGGS+LASL TF QMW+ K EY+E G
Sbjct:  364 GISQLISHTLSNIDIDLRASLANNIIVTGGVSLISQLTERLYLELSNNNPG-LKIRLHAVGNSTERINQAWIGGSVLASLGTFHQMWVTKEEYNEVG 459          
BLAST of EY692485 vs. ExPASy Swiss-Prot
Match: ARP5_DROPS (Actin-related protein 5 OS=Drosophila pseudoobscura pseudoobscura GN=Arp5 PE=3 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 8.616e-12
Identity = 41/136 (30.15%), Postives = 65/136 (47.79%), Query Frame = -3
Query:  237 KTSSAVEKSYELXDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESG 644
            +T SA E +Y+L        G E  R PE+LFQPSMIG   AG+ E     +       ++ +  ++ L+GG   F G+ +R+++E   + P   K  +    +   S W+G  + AS   F Q    + +Y E G
Sbjct:  504 QTQSAAE-NYQLH------FGVEDIRVPEILFQPSMIGSPEAGLAELIAFVLKLFTAQEQQRMVEHVYLTGGCAQFRGLKERLAREFLEMRPFQSKFSIYESDDHTLSAWLGACVQASQPNFGQTLTTRKDYQEHG 632          
BLAST of EY692485 vs. ExPASy Swiss-Prot
Match: ARP5_SCHPO (Actin-like protein arp5 OS=Schizosaccharomyces pombe GN=arp5 PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.125e-11
Identity = 33/121 (27.27%), Postives = 63/121 (52.07%), Query Frame = -3
Query:  225 IGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIV 587
            +  E+ R PEV+F PS++G++ AGI E   + + +  ++ ++ L  N++++GG    PG+  R+ +E++++ P    I V          W G S  +    F+   + + EY E GP  +
Sbjct:  591 LNVEQIRVPEVIFSPSIVGIDQAGILEIMRSILQRHSLEEQQKLVSNVLITGGLGSLPGMETRIKRELTSIMPVGSSINVFRASNPLLDAWKGASEWSVTEKFKAAKVTREEYLEKGPEYI 711          
BLAST of EY692485 vs. ExPASy Swiss-Prot
Match: ARP5_DROME (Actin-related protein 5 OS=Drosophila melanogaster GN=Arp5 PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.125e-11
Identity = 38/116 (32.76%), Postives = 56/116 (48.28%), Query Frame = -3
Query:  237 GAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESG 584
            G E  R PEVLFQPSMIG   AG+ E     +       ++ L  ++ L+GG   F G+ +R+ KE+  + P   K  +    E   S W+G  + A   TF Q    + ++ E G
Sbjct:  514 GVENIRVPEVLFQPSMIGCSEAGLAELIAFVLKLFPAAEQQRLVEHVYLTGGCAQFKGLKERLIKELMEMRPFQSKFAIYESDEPTLSAWLGACVHAGEPTFGQTLTTRQDHQEHG 629          
BLAST of EY692485 vs. ExPASy Swiss-Prot
Match: ARP5_YEAST (Actin-related protein 5 OS=Saccharomyces cerevisiae GN=ARP5 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.585e-11
Identity = 40/131 (30.53%), Postives = 67/131 (51.15%), Query Frame = -3
Query:  225 IGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMK---------CDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILA-SLSTFQQMWIAKAEYDESGPSIV 587
            +  ER R PEV+FQP+M G + AGI E +   ++K             I  D+  N++++GG+   PG+ +R+ KE +   P+   I V    +     W G + LA +   +++  I+K EY+E GP  +
Sbjct:  614 LNVERIRVPEVIFQPTMGGQDQAGICELSETILLKKFGSQPGKLSQTSI--DMVNNVLITGGNAKVPGLKERIVKEFTGFLPTGTNITVNMSSDPSLDAWKGMAALARNEEQYRKTVISKKEYEEYGPEYI 742          
The following BLAST results are available for this feature:
BLAST of EY692485 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 479
Match NameE-valueIdentityDescription
ARP6_CAEEL5.397e-1427.00Actin-like protein C08B11.6 OS=Caenorhabditis eleg... [more]
ARP5_AEDAE1.202e-1335.04Actin-related protein 5 OS=Aedes aegypti GN=Arp5 P... [more]
ARP4_DEBHA1.202e-1336.45Actin-related protein 4 OS=Debaryomyces hansenii G... [more]
ARP3_ARATH2.678e-1329.19Actin-related protein 3 OS=Arabidopsis thaliana GN... [more]
ARP4_CANAL2.267e-1239.18Actin-related protein 4 OS=Candida albicans GN=ARP... [more]
ARP5_DROPS8.616e-1230.15Actin-related protein 5 OS=Drosophila pseudoobscur... [more]
ARP5_SCHPO1.125e-1127.27Actin-like protein arp5 OS=Schizosaccharomyces pom... [more]
ARP5_DROME1.125e-1132.76Actin-related protein 5 OS=Drosophila melanogaster... [more]
ARP5_YEAST5.585e-1130.53Actin-related protein 5 OS=Saccharomyces cerevisia... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-001-B08-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692485 ID=EY692485; Name=EY692485; organism=Citrus sinensis; type=EST; length=889bp
CCACGCGTCCGTTTTTTTTTTTCAAAAAACTTCTCATAATAGATGAGAAT
GAAAGAACTTGACCATTTTGAAAATCAACTCAGCCTTCTCAAAGTCATCG
CTCCAACACGAAAATAAACACATGGATAACAAAGCTAAAATGAAAAAAGG
TTGCAAACTGCAATTGGAAAACAGTAATTCTTTCAAAAATCCTATTGGTG
AACAGTTTAGAAGCACTTTCTATGCACAATTGATGGCCCGGACTCGTCAT
ACTCAGCCTTTGCAATCCACATCTGCTGGAATGTGCTAAGAGAAGCCAAG
ATGGAGCCTCCTATCCAGACACTATACTTCCTCTCAGGTGGTGCCACTAC
CTTAATCTTCATGCTGCTTGGGGCTAGGGCAGAAATTTCCTTGCTCATTC
TATCGGCAATGCCAGGGAACATAGTGGAACCACCACTGAGGACAATGTTG
CCGTACAGGTCTTTTCTGATATCAACATCGCACTTCATGATGGAGTTGTA
AGTGGTCTCGTGGATGCCTGCTGCTTCCATACCAATCATGGATGGTTGGA
AAAGGACCTCAGGACACCTGAAACGCTCAGCGCCAATAGTGATAACCTGC
CCATCANGCAACTCATAGCTCTTCTCAACTGCAGAGCTGGTCTTGGAAGT
CTCAAGCTCCTGNTCATAGTCAAGAGCGATGTAAGCCAGCTTTTCCTTCA
TGTCCCTGACAATTCACGCTCCGCCGTGGTGGTGAAAGAGTACCCACGCT
CAGTGAGGATTTTTCATCAGTATCAGTGAGGTCACGACAGCAAGGTCAAG
ACGAGTATTGCATGTGGGAGGCATACCCTCATATATAAGACTGTATGCTG
ACACATCACAGAGTCAACCCATTACAGGGTACGACCTCC
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