EY692475
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY692475 vs. ExPASy Swiss-Prot
Match: RAE1_MOUSE (Rab proteins geranylgeranyltransferase component A 1 OS=Mus musculus GN=Chm PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 7.783e-16 Identity = 49/182 (26.92%), Postives = 93/182 (51.10%), Query Frame = 3 Query: 270 RDYNVDMIPKFIIANGALVRVLIHTDVTKYLYFKAVDGSFVYNKGKVHKVPATDMEALKSPLMGIFEKRRARKFFIYVQDYDENDPKTHEGMDLTRVTTRELIAKYGLDDNTIDFIGHALALHRDDRYLNEPALDTVKRMKLYAESMARFSGGSPYIYPSVWLXELPXAFAXLNAVYGGRIC 815 R +N+D++ K + + G L+ +LI ++V++Y FK + + +G V +VP + + S + + EKR KF + +Y E+ P ++ + T T E + L N F+ H++A+ + +D +K K + + + R+ G +P+++P ELP F + AV+GG C Sbjct: 237 RRFNIDLVSKLLYSRGLLIDLLIKSNVSRYAEFKNITRILAFREGTVEQVPCSRADVFNSKQLTMVEKRMLMKFLTFCVEY-EDHPDEYKAYEET--TFSEYLKTQKLTPNLQYFVLHSIAMTSE---TTSSTVDGLKATKKFLQCLGRY-GNTPFLFPLYGQGELPQCFCRMCAVFGGIYC 411
BLAST of EY692475 vs. ExPASy Swiss-Prot
Match: RAE1_HUMAN (Rab proteins geranylgeranyltransferase component A 1 OS=Homo sapiens GN=CHM PE=1 SV=3) HSP 1 Score: 84.7297 bits (208), Expect = 7.783e-16 Identity = 48/182 (26.37%), Postives = 92/182 (50.55%), Query Frame = 3 Query: 270 RDYNVDMIPKFIIANGALVRVLIHTDVTKYLYFKAVDGSFVYNKGKVHKVPATDMEALKSPLMGIFEKRRARKFFIYVQDYDENDPKTHEGMDLTRVTTRELIAKYGLDDNTIDFIGHALALHRDDRYLNEPALDTVKRMKLYAESMARFSGGSPYIYPSVWLXELPXAFAXLNAVYGGRIC 815 R +N+D++ K + + G L+ +LI ++V++Y FK + + +G+V +VP + + S + + EKR KF + +Y E P ++G + +T E + L N + H++A+ + +D +K K + + R+ G +P+++P ELP F + AV+GG C Sbjct: 225 RRFNIDLVSKLLYSRGLLIDLLIKSNVSRYAEFKNITRILAFREGRVEQVPCSRADVFNSKQLTMVEKRMLMKFLTFCMEY-EKYPDEYKGYE--EITFYEYLKTQKLTPNLQYIVMHSIAMTSETA---SSTIDGLKATKNFLHCLGRY-GNTPFLFPLYGQGELPQCFCRMCAVFGGIYC 399
BLAST of EY692475 vs. ExPASy Swiss-Prot
Match: RAE1_RAT (Rab proteins geranylgeranyltransferase component A 1 OS=Rattus norvegicus GN=Chm PE=1 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 2.264e-15 Identity = 48/184 (26.09%), Postives = 94/184 (51.09%), Query Frame = 3 Query: 270 RDYNVDMIPKFIIANGALVRVLIHTDVTKYLYFKAVDGSFVYNKGKVHKVPATDMEALKSPLMGIFEKRRARKFFIYVQDYDE--NDPKTHEGMDLTRVTTRELIAKYGLDDNTIDFIGHALALHRDDRYLNEPALDTVKRMKLYAESMARFSGGSPYIYPSVWLXELPXAFAXLNAVYGGRIC 815 R +N+D++ + + + G L+ +LI ++V++Y FK + + +G V +VP + + S + + EKR KF + +Y+E ++ + +EG T E + L N F+ H++A+ + +D +K K + + + R+ G +P+++P ELP F + AV+GG C Sbjct: 222 RRFNIDLVSQLLYSRGLLIDLLIKSNVSRYAEFKNITRILAFREGTVEQVPCSRADVFNSKQLTMVEKRMLMKFLTFCVEYEEHPDEYRAYEG-----TTFSEYLKTQKLTPNLQYFVLHSIAMTSE---TTSCTVDGLKATKKFLQCLGRY-GNTPFLFPLYGQGELPQCFCRMCAVFGGIYC 396
BLAST of EY692475 vs. ExPASy Swiss-Prot
Match: RAEP_YEAST (Rab proteins geranylgeranyltransferase component A OS=Saccharomyces cerevisiae GN=MRS6 PE=1 SV=2) HSP 1 Score: 79.337 bits (194), Expect = 3.270e-14 Identity = 49/166 (29.52%), Postives = 83/166 (50.00%), Query Frame = 3 Query: 72 EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSSLNLIQLWKRFRGNEQPPAHLG------------------SSRDYNVDMIPKFIIANGALVRVLIHTDVTKYLYFKAVDGSFVYNKGKVHKVPATDMEALKSPLMGIFEKRRARKFFIYVQDYD 515 ++ DV++ GTG+ E +L+ L+ G VLH+D+NDYYG S++L + Q+ KR+ NE + SSRD+ +D+ PK + A L+ +LI + V +YL F+++ Y K+ T E + + KR KF +V +++ Sbjct: 45 DKVDVLIAGTGMVESVLAAALAWQGSNVLHIDKNDYYGDTSATLTVDQI-KRW-VNEVNEGSVSCYKNAKLYVSTLIGSGKYSSRDFGIDLSPKILFAKSDLLSILIKSRVHQYLEFQSLSNFHTYENDCFEKLTNTKQEIFTDQNLPLMTKRNLMKFIKFVLNWE 208
BLAST of EY692475 vs. ExPASy Swiss-Prot
Match: RAEP_CANAL (Rab proteins geranylgeranyltransferase component A OS=Candida albicans GN=MRS6 PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 3.060e-12 Identity = 51/161 (31.68%), Postives = 82/161 (50.93%), Query Frame = 3 Query: 81 DVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSSLNLIQLWK-----------RFR-------GNEQPPAHLGSSRDYNVDMIPKFIIANGALVRVLIHTDVTKYLYFKAVDGSFVY-NKGKVHKVPA-TDMEALKSPLMGIFEKRRARKFFIYV 503 DV+++GTGL+E IL+ LS G +VLH+D N YYG S+L + QL K +F+ G +Q + +S+DY +D+ PK + L+ +LI + V +YL F+++ V+ N KV A T + + + KR KF ++ Sbjct: 5 DVLIIGTGLQESILAAALSWQGTQVLHIDSNTYYGDSCSTLTIEQLKKWCGDVNSGKIHQFQDAQIYIPGGKQSNQY--TSKDYGIDLTPKIMFCQSDLLSLLIKSRVYRYLEFQSLSNFHVFENDDFQQKVNATTKQDIFTDKSLSLMTKRYLMKFLKFL 163 The following BLAST results are available for this feature:
BLAST of EY692475 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 25
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY692475 ID=EY692475; Name=EY692475; organism=Citrus sinensis; type=EST; length=906bpback to top |