EY692470

Overview
NameEY692470
Unique NameEY692470
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length915
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692470 vs. ExPASy Swiss-Prot
Match: CHIB_ARATH (Basic endochitinase B OS=Arabidopsis thaliana GN=CHI-B PE=1 SV=3)

HSP 1 Score: 238.039 bits (606), Expect = 1.953e-62
Identity = 107/180 (59.44%), Postives = 132/180 (73.33%), Query Frame = 3
Query:  162 GELGKIISREMFEDLLPYRNDERCHARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCYIRQVSHGSDXXXXXXXXXLPG--QYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPS 695
            G+L  IIS   F+D+L +RND  C ARGFYTY+AFI AAK+FP FG +G+   RK+E+AAFF QT HETTGGW  AP G Y+WGYC+ ++ +  SD              +YYGRGP+QL+WN NY  CG A+GVDLLNNPDL+A D V++FK+AIWFWMTAQPPKPSCH VI  +W+PS
Sbjct:   84 GDLSGIISSSQFDDMLKHRNDAACPARGFYTYNAFITAAKSFPGFGTTGDTATRKKEVAAFFGQTSHETTGGWATAPDGPYSWGYCFKQEQNPASDYCEPSATWPCASGKRYYGRGPMQLSWNYNYGLCGRAIGVDLLNNPDLVANDAVIAFKAAIWFWMTAQPPKPSCHAVIAGQWQPS 263          

HSP 2 Score: 21.9422 bits (45), Expect = 1.953e-62
Identity = 9/14 (64.29%), Postives = 10/14 (71.43%), Query Frame = 2
Query:  701 DVNASRLPGYGLTT 742
            D  A RLPGYG+ T
Sbjct:  266 DRAAGRLPGYGVIT 279          
BLAST of EY692470 vs. ExPASy Swiss-Prot
Match: CHI6_POPTR (Acidic endochitinase WIN6 OS=Populus trichocarpa GN=WIN6 PE=2 SV=2)

HSP 1 Score: 236.498 bits (602), Expect = 2.546e-62
Identity = 114/204 (55.88%), Postives = 135/204 (66.18%), Query Frame = 3
Query:   90 GGSAQNCGSGAVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDERCHARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCYIRQVSHGSDXXXXXXXXXLPG-QYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSA 698
            GG   + G     G  D G   D G L  II +  F+ LL +RND RC A GFYTY+AFI AAK FP FGN+G++ MRKREIAAF  QT HETTGGWPDAP G YAWGYCY+++++             + G QY GRGPIQL+WN NY  CG+ L + LL  P+L+ TDPV+SFK+AIWFWM  Q PKPSCH VI   W PSA
Sbjct:   63 GGGGGDGGDDGCDGGDDGGGDGDDGYLSDIIPKSKFDALLKFRNDARCPAAGFYTYNAFISAAKEFPDFGNTGDDLMRKREIAAFLGQTSHETTGGWPDAPCGPYAWGYCYLKEINCQPYCDPSSNYQCVAGKQYCGRGPIQLSWNYNYGLCGDDLKLPLLQEPELVETDPVISFKTAIWFWMKPQSPKPSCHAVITGNWTPSA 266          

HSP 2 Score: 23.0978 bits (48), Expect = 2.546e-62
Identity = 8/14 (57.14%), Postives = 11/14 (78.57%), Query Frame = 2
Query:  701 DVNASRLPGYGLTT 742
            D+ A R+PGYG+ T
Sbjct:  268 DLEAGRVPGYGVIT 281          
BLAST of EY692470 vs. ExPASy Swiss-Prot
Match: CHI2_BRANA (Endochitinase CH25 OS=Brassica napus PE=2 SV=1)

HSP 1 Score: 238.81 bits (608), Expect = 2.548e-62
Identity = 110/197 (55.84%), Postives = 137/197 (69.54%), Query Frame = 3
Query:  111 GSGAVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDERCHARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCYIRQVSHGSDXXXXXXXXXLPG--QYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPS 695
            G  + CG    G     G+L  IISR  F+D+L +RND  C ARGFYTYDAFI AAK+FP FG +G+   RK+EIAAFF QT HETTGGW  AP G Y+WGYC+ ++ +  S+               YYGRGP+QL+WN NY +CG A+G DLLNNPDL++ DPV++FK+AIWFWMT Q PKPSCH VI+ +W+PS
Sbjct:   55 GCQSQCGGTPPG---PTGDLSGIISRSQFDDMLKHRNDNACPARGFYTYDAFINAAKSFPGFGTTGDTATRKKEIAAFFGQTSHETTGGWATAPDGPYSWGYCFKQEQNPSSNYCSPSAEWPCASGKSYYGRGPMQLSWNYNYGQCGRAIGSDLLNNPDLVSNDPVIAFKAAIWFWMTPQSPKPSCHAVIVGQWQPS 248          

HSP 2 Score: 20.7866 bits (42), Expect = 2.548e-62
Identity = 8/14 (57.14%), Postives = 10/14 (71.43%), Query Frame = 2
Query:  701 DVNASRLPGYGLTT 742
            D  A R+PGYG+ T
Sbjct:  251 DRAAGRVPGYGVIT 264          
BLAST of EY692470 vs. ExPASy Swiss-Prot
Match: CHIT_CARPA (Endochitinase OS=Carica papaya PE=1 SV=1)

HSP 1 Score: 235.728 bits (600), Expect = 2.555e-62
Identity = 107/177 (60.45%), Postives = 135/177 (76.27%), Query Frame = 3
Query:  174 KIISREMFEDLLPYRNDERCHARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCYIRQVSHGSD-XXXXXXXXXLPGQ-YYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSA 698
            KIISR MF+ +L +RN+  C A+GFYTYDAF+ AAK+FP+FG +G+  +RKRE+AAF  QT HETTGGWP AP G YAWGYC++++ +  S+           PG+ YYGRGP+QL+WN NY  CGEAL V+LL NPDL+ATD VLSFK+A+WFWMT Q PKPSCH+V+   W+PSA
Sbjct:    4 KIISRSMFDQMLKHRNNPACPAKGFYTYDAFLAAAKSFPSFGTTGSTDVRKRELAAFLGQTSHETTGGWPSAPDGPYAWGYCFLKERNPSSNYCAPSPRYPCAPGKSYYGRGPLQLSWNYNYGPCGEALRVNLLGNPDLVATDRVLSFKTALWFWMTPQAPKPSCHDVLTGRWQPSA 180          

HSP 2 Score: 23.8682 bits (50), Expect = 2.555e-62
Identity = 10/21 (47.62%), Postives = 13/21 (61.90%), Query Frame = 2
Query:  680 RMETISNDVNASRLPGYGLTT 742
            R +  + D  A RLPGYG+ T
Sbjct:  175 RWQPSAADTAAGRLPGYGVLT 195          
BLAST of EY692470 vs. ExPASy Swiss-Prot
Match: CHIC_SOLLC (Basic 30 kDa endochitinase OS=Solanum lycopersicum GN=CHI9 PE=1 SV=1)

HSP 1 Score: 238.424 bits (607), Expect = 4.280e-62
Identity = 116/205 (56.59%), Postives = 142/205 (69.27%), Query Frame = 3
Query:   90 GGSAQNCGSGAVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDERCHARG-FYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCYIR-QVSHGSDXXXXXXXXXLPGQ-YYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPS 695
            G + + CG G  C  +  G     G+LG +IS  MF+ +L +RND  C  +  FY+Y+AF+ AA +FP FG +G+ T RKREIAAF AQT HETTGGWP AP G YAWGYC++R Q S G            PG+ Y+GRGPIQ++ N NY  CG A+GVDLLNNPDL+ATDPV+SFKSAIWFWMT Q PKPSCH+VI   W+PS
Sbjct:   47 GNTNEYCGPGN-CQSQCPGGPGPSGDLGGVISNSMFDQMLNHRNDNACQGKNNFYSYNAFVTAAGSFPGFGTTGDITARKREIAAFLAQTSHETTGGWPTAPDGPYAWGYCFLREQGSPGDYCTPSSQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDPVISFKSAIWFWMTPQSPKPSCHDVITGRWQPS 250          
BLAST of EY692470 vs. ExPASy Swiss-Prot
Match: CHI3_TOBAC (Endochitinase 3 OS=Nicotiana tabacum GN=CHN14 PE=3 SV=1)

HSP 1 Score: 234.187 bits (596), Expect = 2.128e-61
Identity = 117/216 (54.17%), Postives = 143/216 (66.20%), Query Frame = 3
Query:   90 GGSAQNCGSGAVCGERDTGHG--------TDG---GELGKIISREMFEDLLPYRNDERCHARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCYIR-QVSHGSDXXXXXXXXXLPGQ-YYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSA 698
            G +   CG G    +  +G G        T G   G++  IIS  MF+ +L +RND  C  + FYTY+AFI AA++F  FG +G+ T RKRE+AAFFAQT HETTGGW  AP G YAWGYCY+R Q +  S           PGQ YYGRGPIQ+++N NY  CG A+G +LLNNPDL+AT+ V+SFKSAIWFWMTAQ PKPSCH+VI   W PSA
Sbjct:   48 GNTQDYCGPGKCQSQCPSGPGPTPRPPTPTPGPSTGDISNIISSSMFDQMLKHRNDNTCQGKSFYTYNAFITAARSFRGFGTTGDTTRRKREVAAFFAQTSHETTGGWDTAPDGRYAWGYCYLREQGNPPSYCVQSSQWPCAPGQKYYGRGPIQISYNYNYGPCGRAIGQNLLNNPDLVATNAVVSFKSAIWFWMTAQSPKPSCHDVITGRWTPSA 263          

HSP 2 Score: 22.3274 bits (46), Expect = 2.128e-61
Identity = 9/14 (64.29%), Postives = 11/14 (78.57%), Query Frame = 2
Query:  701 DVNASRLPGYGLTT 742
            D  A+RLPGYG+ T
Sbjct:  265 DRAANRLPGYGVIT 278          
BLAST of EY692470 vs. ExPASy Swiss-Prot
Match: CHI3_SOLTU (Endochitinase 3 (Fragment) OS=Solanum tuberosum GN=CHTB3 PE=2 SV=1)

HSP 1 Score: 235.728 bits (600), Expect = 2.774e-61
Identity = 116/205 (56.59%), Postives = 140/205 (68.29%), Query Frame = 3
Query:   90 GGSAQNCGSGAVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDERCHARG-FYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCYIR-QVSHGSDXXXXXXXXXLPGQ-YYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPS 695
            G +   CG G  C  +  G     G+LG +IS  MF+ +L +RND  C  +  FY+Y+AFI AA +FP FG +G+ T RKREIAAF AQT HETTGGWP AP G YAWGYC++R Q S G            PG+ Y+GRGPIQ++ N NY  CG A+GVDLLNNPDL+ATD V+SFKSAIWFWMT Q PKPSCH+VI   W+PS
Sbjct:   43 GNTNDYCGPGN-CQSQCPGGPGPSGDLGGVISNSMFDQMLNHRNDNACQGKNNFYSYNAFISAAGSFPGFGTTGDITARKREIAAFLAQTSHETTGGWPSAPDGPYAWGYCFLREQGSPGDYCTPSSQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDSVISFKSAIWFWMTPQSPKPSCHDVITGRWQPS 246          
BLAST of EY692470 vs. ExPASy Swiss-Prot
Match: CHI1_GOSHI (Endochitinase 1 OS=Gossypium hirsutum PE=3 SV=1)

HSP 1 Score: 232.261 bits (591), Expect = 6.151e-61
Identity = 119/207 (57.49%), Postives = 140/207 (67.63%), Query Frame = 3
Query:   90 GGSAQNCGSGAVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDERCHARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGG--WPDAPGGEYAWGYCYIRQVSHGSDXXXXXXXXXL-PG-QYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSA 698
            G  +Q  GSG   G          G L  +ISRE F  +L +RND  C ARGFYTYDAFI AA++FPAF  +G++  RKREIAAF AQT HETTGG  W  AP G YAWGYCY R+++  S            PG QY+GRGP+QL+WN NY +CG A+GVDLLNNPDLL++DP +SFKSA WFWMT Q PKPSCH VII  W PS+
Sbjct:   57 GCQSQCSGSGPAPGP---------GGLTNLISRETFNQMLLHRNDGACPARGFYTYDAFIAAARSFPAFATTGDQATRKREIAAFLAQTSHETTGGAGWA-APDGPYAWGYCYNRELNPPSSYCASDPNYPCAPGKQYFGRGPMQLSWNYNYGQCGRAIGVDLLNNPDLLSSDPTISFKSAFWFWMTPQSPKPSCHNVIIGAWSPSS 253          

HSP 2 Score: 22.7126 bits (47), Expect = 6.151e-61
Identity = 9/16 (56.25%), Postives = 12/16 (75.00%), Query Frame = 2
Query:  695 SNDVNASRLPGYGLTT 742
            S+D  A R+PGYG+ T
Sbjct:  253 SSDRAAGRVPGYGVIT 268          
BLAST of EY692470 vs. ExPASy Swiss-Prot
Match: CHI2_SOLTU (Endochitinase 2 (Fragment) OS=Solanum tuberosum GN=CHTB2 PE=2 SV=1)

HSP 1 Score: 233.417 bits (594), Expect = 8.022e-61
Identity = 115/205 (56.10%), Postives = 140/205 (68.29%), Query Frame = 3
Query:   90 GGSAQNCGSGAVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDERCHARG-FYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCYIR-QVSHGSDXXXXXXXXXLPGQ-YYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPS 695
            G +   CG G    +   G     G+LG +IS  MF+ +L +RND  C  +G FY+Y+AFI AA +FP FG +G+ T RKREIAAFFAQT HETTGGW  AP G YAWGYC++R Q S G            PG+ Y+GRGPIQ++ N NY  CG A+GVDLLNNPDL+ATD ++SFKSAIWFWMT Q PKPSCH+VI   W+PS
Sbjct:   43 GNTNDYCGPGNCQSQCPGG---SPGDLGGVISNSMFDQMLNHRNDNACQGKGNFYSYNAFISAAGSFPGFGTTGDITARKREIAAFFAQTSHETTGGWASAPDGPYAWGYCFLREQGSPGDYCTPSNQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDSIISFKSAIWFWMTPQSPKPSCHDVITGRWQPS 244          

HSP 2 Score: 21.1718 bits (43), Expect = 8.022e-61
Identity = 8/21 (38.10%), Postives = 13/21 (61.90%), Query Frame = 2
Query:  680 RMETISNDVNASRLPGYGLTT 742
            R +    D  A+R+PG+G+ T
Sbjct:  240 RWQPSGTDQAANRVPGFGVIT 260          
BLAST of EY692470 vs. ExPASy Swiss-Prot
Match: CHI2_GOSHI (Endochitinase 2 (Fragment) OS=Gossypium hirsutum PE=2 SV=2)

HSP 1 Score: 232.261 bits (591), Expect = 3.067e-60
Identity = 119/207 (57.49%), Postives = 140/207 (67.63%), Query Frame = 3
Query:   90 GGSAQNCGSGAVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDERCHARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGG--WPDAPGGEYAWGYCYIRQVSHGSDXXXXXXXXXL-PG-QYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSA 698
            G  +Q  GSG   G          G L  +ISRE F  +L +RND  C ARGFYTYDAFI AA++FPAF  +G++  RKREIAAF AQT HETTGG  W  AP G YAWGYCY R+++  S            PG QY+GRGP+QL+WN NY +CG A+GVDLLNNPDLL++DP +SFKSA WFWMT Q PKPSCH VII  W PS+
Sbjct:   35 GCQSQCSGSGPAPGP---------GGLTNLISRETFNQMLLHRNDGACPARGFYTYDAFIAAARSFPAFATTGDQATRKREIAAFLAQTSHETTGGAGWA-APDGPYAWGYCYNRELNPPSSYCASDPNYPCAPGKQYFGRGPMQLSWNYNYGQCGRAIGVDLLNNPDLLSSDPTISFKSAFWFWMTPQSPKPSCHNVIIGAWSPSS 231          
The following BLAST results are available for this feature:
BLAST of EY692470 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
CHIB_ARATH1.953e-6259.44Basic endochitinase B OS=Arabidopsis thaliana GN=C... [more]
CHI6_POPTR2.546e-6255.88Acidic endochitinase WIN6 OS=Populus trichocarpa G... [more]
CHI2_BRANA2.548e-6255.84Endochitinase CH25 OS=Brassica napus PE=2 SV=1[more]
CHIT_CARPA2.555e-6260.45Endochitinase OS=Carica papaya PE=1 SV=1[more]
CHIC_SOLLC4.280e-6256.59Basic 30 kDa endochitinase OS=Solanum lycopersicum... [more]
CHI3_TOBAC2.128e-6154.17Endochitinase 3 OS=Nicotiana tabacum GN=CHN14 PE=3... [more]
CHI3_SOLTU2.774e-6156.59Endochitinase 3 (Fragment) OS=Solanum tuberosum GN... [more]
CHI1_GOSHI6.151e-6157.49Endochitinase 1 OS=Gossypium hirsutum PE=3 SV=1[more]
CHI2_SOLTU8.022e-6156.10Endochitinase 2 (Fragment) OS=Solanum tuberosum GN... [more]
CHI2_GOSHI3.067e-6057.49Endochitinase 2 (Fragment) OS=Gossypium hirsutum P... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-001-A04-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692470 ID=EY692470; Name=EY692470; organism=Citrus sinensis; type=EST; length=915bp
CCACGCGTCCGTGATATCATAACTCTTGCTTTCAAATGAGGCTCATTGGG
TCCTTACTAATTTTCTCTCTAGTTTTATCTTTTGTACAAGGAGGTTCAGC
ACAGAATTGTGGAAGCGGCGCTGTGTGCGGTGAACGTGATACTGGCCACG
GGACGGATGGCGGTGAACTGGGCAAGATCATCTCAAGGGAGATGTTTGAA
GACTTGCTTCCGTATAGAAATGATGAACGATGCCATGCCAGAGGCTTCTA
CACTTATGATGCTTTTATAGAGGCAGCCAAAGCTTTTCCAGCCTTTGGTA
ACTCTGGAAATGAAACCATGCGTAAAAGAGAAATTGCTGCCTTTTTTGCC
CAAACTGGCCATGAAACTACTGGGGGATGGCCCGATGCACCTGGTGGAGA
ATATGCTTGGGGATATTGCTATATTAGGCAAGTTAGCCATGGGTCCGACT
ACTGTTATCCTTACTGTCCATGTCCCTTGCCAGGGCAATACTATGGCCGA
GGTCCAATTCAACTCACTTGGAATTGCAATTACTTAAGGTGCGGAGAAGC
CTTGGGGGTGGACTTGTTGAACAATCCAGACCTTCTTGCCACTGATCCAG
TACTATCATTCAAGTCAGCAATCTGGTTCTGGATGACTGCACAGCCACCA
AAGCCATCGTGCCACGAAGTCATTATCGACGAATGGAAACCATCAGCAAT
GACGTAAACGCCAGCCGGCTTCCGGGATACGGTCTAACCACAATATNANN
TCACGTGGAATTTTGATGTGCAANGTTGGAATAGCTTTGTAGCTAACCGT
ATGGGGTCTTTACACTTTCTGTGGCAAGTTGGGATTCAGCTGGCGACATC
TTGATGCTACACCANGGNCCTTATGGCCTATTTGATGGCCATCTATTGAT
CTCATGATCACGTTT
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