EY692470

Overview
NameEY692470
Unique NameEY692470
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length915
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692470 vs. ExPASy Swiss-Prot
Match: CHI1_ORYSJ (Chitinase 1 OS=Oryza sativa subsp. japonica GN=Cht1 PE=2 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 1.333e-54
Identity = 103/214 (48.13%), Postives = 136/214 (63.55%), Query Frame = 3
Query:   90 GGSAQNCGSGAV------CGERDTGHGTDGGELG--KIISREMFEDLLPYRNDERCHARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCYIRQVSH--GSDXXXXXXXXXLPG--QYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPS 695
            G ++  CGSG        CG       + GG  G   I+SR +F+ +L +RND  C A+ FYTYDAF+ AA AFP+F  +G+   RKRE+AAF AQT HETTGGW  AP G Y+WGYC+  + +   GSD              +YYGRGPIQ+++N NY   G+A+G +LL+NPDL+A+D  +SFK+A WFWMT Q PKPSCH V+  +W P+
Sbjct:   45 GSTSAYCGSGCQSQCSGSCGGGGPTPPSGGGGSGVASIVSRSLFDQMLLHRNDAACPAKNFYTYDAFVAAANAFPSFATTGDAATRKREVAAFLAQTSHETTGGWATAPDGPYSWGYCFKEENNGNVGSDYCVQSSQWPCAAGKKYYGRGPIQISYNYNYGPAGQAIGSNLLSNPDLVASDATVSFKTAFWFWMTPQSPKPSCHAVMTGQWTPN 258          

HSP 2 Score: 23.8682 bits (50), Expect = 1.333e-54
Identity = 9/15 (60.00%), Postives = 11/15 (73.33%), Query Frame = 2
Query:  698 NDVNASRLPGYGLTT 742
            ND  A R+PGYG+ T
Sbjct:  260 NDQAAGRVPGYGVVT 274          
BLAST of EY692470 vs. ExPASy Swiss-Prot
Match: CHIA_SOLLC (Acidic 26 kDa endochitinase OS=Solanum lycopersicum GN=CHI3 PE=1 SV=1)

HSP 1 Score: 207.994 bits (528), Expect = 2.961e-54
Identity = 98/184 (53.26%), Postives = 126/184 (68.48%), Query Frame = 3
Query:  150 GTDGGELGKIISREMFEDLLPYRNDERCHARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCYIRQVSHGSDXXXXXXXXXLPGQYYGRGPIQLTWNCNYLRCGEALGV--DLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPS 695
            GT     G I++RE+FE +L +RN++ C A+GFYTYDAFI AA +FP FG +G++T RK+EIAAFF QT HET GG      G +  GYC+++Q+                 +YYGRGPIQLT   NY R G+ +GV  +L+NNPDL+ATDP++SFK+AIWFWMT Q  KPSCH VII +W PS
Sbjct:   21 GTLAQNAGSIVTRELFEQMLSFRNNDACPAKGFYTYDAFIAAANSFPGFGTAGDDTARKKEIAAFFGQTSHETNGG----SAGTFTGGYCFVKQIEQSD-------------RYYGRGPIQLTHQSNYERAGQGIGVGQELVNNPDLVATDPIISFKTAIWFWMTEQDNKPSCHNVIIGQWTPS 187          

HSP 2 Score: 24.6386 bits (52), Expect = 2.961e-54
Identity = 10/23 (43.48%), Postives = 15/23 (65.22%), Query Frame = 2
Query:  701 DVNASRLPGYGLTTIXXHVEF*C 769
            D  A+R+PGYG+ T   + +F C
Sbjct:  190 DTAANRVPGYGVITNIINGQFEC 212          
BLAST of EY692470 vs. ExPASy Swiss-Prot
Match: CHIA_SOLCI (Acidic endochitinase pcht28 OS=Solanum chilense PE=2 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 7.317e-54
Identity = 100/184 (54.35%), Postives = 127/184 (69.02%), Query Frame = 3
Query:  150 GTDGGELGKIISREMFEDLLPYRNDERCHARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCYIRQVSHGSDXXXXXXXXXLPGQYYGRGPIQLTWNCNYLRCGEALGV--DLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPS 695
            GT     G I++RE+FE +L +RN++ C A+GFYTYDAFI AA +FP FG +G++T RK+EIAAFF QT HET GG      G +  GYC++RQ+                 +YYGRGPIQLT   NY R G+ +GV  DL+NNPDL+ATDP++SF++AIWFWMTAQ  KPSCH VII +W PS
Sbjct:   21 GTLAQNAGSIVTRELFEQMLSFRNNDACPAKGFYTYDAFIAAANSFPGFGTTGDDTARKKEIAAFFGQTSHETKGG----SAGTFTGGYCFVRQIDQSD-------------RYYGRGPIQLTHQSNYERAGQGIGVGQDLVNNPDLVATDPIISFRTAIWFWMTAQDNKPSCHNVIIGQWTPS 187          
BLAST of EY692470 vs. ExPASy Swiss-Prot
Match: CHI12_ORYSJ (Chitinase 12 OS=Oryza sativa subsp. japonica GN=Cht12 PE=2 SV=2)

HSP 1 Score: 204.142 bits (518), Expect = 2.676e-52
Identity = 100/206 (48.54%), Postives = 125/206 (60.68%), Query Frame = 3
Query:   96 SAQNCGSGAVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDERCHARGFYTYDAFIEAAKAFPAFGNSGNET-MRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCYIRQVSHGSDXXXXXXXXXLP----GQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSA 698
            SA  CG G       +G    G  +  I+SR +F+ +L +RND  C A  FYTYDAF+ AA AFP F  +G +    KRE+AAF AQT HETTGGW  AP G YAWGYC+  +    +           P     +YYGRGPIQL++N NY   G+A+G DLL +PDL+A+D  +SF +A WFWMT Q PKPSCH V   +W PSA
Sbjct:   61 SAAGCGGGGPTPPSGSG----GSGVASIVSRSLFDQMLLHRNDAACPASNFYTYDAFVAAASAFPGFAAAGGDADTNKREVAAFLAQTSHETTGGWATAPDGPYAWGYCFKEENGGAAGPDYCQQSAQWPCAAGKKYYGRGPIQLSYNFNYGPAGQAIGADLLGDPDLVASDATVSFDTAFWFWMTPQSPKPSCHAVATGQWTPSA 262          

HSP 2 Score: 21.9422 bits (45), Expect = 2.676e-52
Identity = 8/16 (50.00%), Postives = 12/16 (75.00%), Query Frame = 2
Query:  695 SNDVNASRLPGYGLTT 742
            ++D  A R+PGYG+ T
Sbjct:  262 ADDQAAGRVPGYGVIT 277          
BLAST of EY692470 vs. ExPASy Swiss-Prot
Match: CHIB_SOLLC (Acidic 27 kDa endochitinase OS=Solanum lycopersicum GN=CHI17 PE=1 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 4.015e-52
Identity = 98/183 (53.55%), Postives = 129/183 (70.49%), Query Frame = 3
Query:  150 GTDGGELGKIISREMFEDLLPYRNDERCHARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCYIRQVSHGSDXXXXXXXXXLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSA 698
            G+   ++G I++ ++F ++L  RND+RC A+GFYTYDAFI AA +FP FG +G++T RK+EIAAFF QT HETTGG   A G  +A GYC++R+ +             +   +YGRGPIQLT   NY   G+A+G DL+NNPDL+ATD  +SFK+AIWFWMTAQ  KPSCH+VI  +W PSA
Sbjct:   13 GSFAQDVGTIVTSDLFNEMLKNRNDDRCPAKGFYTYDAFIAAANSFPGFGTTGDDTARKKEIAAFFGQTSHETTGGSLSADG-PFAGGYCFVREGNQ------------MGSGFYGRGPIQLTGQSNYDLAGQAIGQDLVNNPDLVATDATVSFKTAIWFWMTAQGNKPSCHDVITGQWTPSA 182          
BLAST of EY692470 vs. ExPASy Swiss-Prot
Match: CHIT_PETHY (Acidic endochitinase OS=Petunia hybrida PE=2 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 3.802e-51
Identity = 98/183 (53.55%), Postives = 123/183 (67.21%), Query Frame = 3
Query:  150 GTDGGELGKIISREMFEDLLPYRNDERCHARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCYIRQVSHGSDXXXXXXXXXLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSA 698
            GT    +G I++ ++F+ +L  RND RC A  FYTYDAFI AA +FP FG +G++T RK+EIAAFF QT HETTGG   +P G YA GYC++R+ +             +   YYGRGPIQLT   NY   G+A+  DL+NNPDL+ATD  +SFK+AIWFWMT Q  KPSCH+VI   W PSA
Sbjct:   20 GTLAQNVGSIVTSDLFDQMLKNRNDARCFAVRFYTYDAFIAAANSFPGFGTTGDDTARKKEIAAFFGQTSHETTGGTL-SPDGPYAGGYCFLREGNQ------------MGNGYYGRGPIQLTGQSNYDLAGKAIEQDLVNNPDLVATDATVSFKTAIWFWMTPQGNKPSCHDVITGRWTPSA 189          

HSP 2 Score: 23.483 bits (49), Expect = 3.802e-51
Identity = 8/14 (57.14%), Postives = 12/14 (85.71%), Query Frame = 2
Query:  701 DVNASRLPGYGLTT 742
            D +A+R+PGYG+ T
Sbjct:  191 DTSANRVPGYGVIT 204          
BLAST of EY692470 vs. ExPASy Swiss-Prot
Match: CHI8_ORYSJ (Chitinase 8 OS=Oryza sativa subsp. japonica GN=Cht8 PE=2 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 5.382e-50
Identity = 96/198 (48.48%), Postives = 129/198 (65.15%), Query Frame = 3
Query:  108 CGSGAVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDERCHARGFYTYDAFIEAAKAFPAFGNSGNET-MRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCYIRQVSHGSDXXXXXXXXXLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSA 698
            C + ++     +G    G  +G +I++ +F  +LP R++ +C ARGFYTYDAFI AA +FPAFG SG    + +RE+AAFF QT HETTGG   +   ++ WGYC+  +++  +              YYGRGPIQLT   NY   G ALG+DL+ NPDL++TD V+SFK+AIWFWMTAQ  KPSCH+VI+  W PSA
Sbjct:   14 CAAASLLAVAASGAAAQG--VGSVITQAVFNSMLPNRDNSQCPARGFYTYDAFIAAANSFPAFGTSGGSAELIRRELAAFFGQTSHETTGGTRGS-SDQFQWGYCFKEEINKATSPP-----------YYGRGPIQLTGQSNYQAAGNALGLDLVGNPDLVSTDAVVSFKTAIWFWMTAQGNKPSCHDVILGRWTPSA 197          

HSP 2 Score: 21.9422 bits (45), Expect = 5.382e-50
Identity = 8/14 (57.14%), Postives = 10/14 (71.43%), Query Frame = 2
Query:  701 DVNASRLPGYGLTT 742
            D  A R+PGYG+ T
Sbjct:  199 DTAAGRVPGYGVIT 212          
BLAST of EY692470 vs. ExPASy Swiss-Prot
Match: CHIQ_TOBAC (Acidic endochitinase Q OS=Nicotiana tabacum PE=1 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 4.485e-49
Identity = 94/177 (53.11%), Postives = 119/177 (67.23%), Query Frame = 3
Query:  168 LGKIISREMFEDLLPYRNDERCHARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCYIRQVSHGSDXXXXXXXXXLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSA 698
            +G I++ ++F ++L  RND RC A GFYTYDAFI AA +FP FG +G++T R++EIAAFF QT HETTGG   A    +  GYC++RQ                  +YYGRGPIQLT   NY + G A+G +L+NNPDL+ATD  +SFK+AIWFWMT Q  KPS H+VII  W PSA
Sbjct:   27 IGSIVTSDLFNEMLKNRNDGRCPANGFYTYDAFIAAANSFPGFGTTGDDTARRKEIAAFFGQTSHETTGGSLSAE--PFTGGYCFVRQNDQSD-------------RYYGRGPIQLTNRNNYEKAGTAIGQELVNNPDLVATDATISFKTAIWFWMTPQDNKPSSHDVIIGRWTPSA 188          

HSP 2 Score: 21.557 bits (44), Expect = 4.485e-49
Identity = 8/14 (57.14%), Postives = 11/14 (78.57%), Query Frame = 2
Query:  701 DVNASRLPGYGLTT 742
            D  A+R+PGYG+ T
Sbjct:  190 DQAANRVPGYGVIT 203          
BLAST of EY692470 vs. ExPASy Swiss-Prot
Match: CHIP_TOBAC (Acidic endochitinase P OS=Nicotiana tabacum PE=1 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 9.256e-49
Identity = 95/177 (53.67%), Postives = 118/177 (66.67%), Query Frame = 3
Query:  168 LGKIISREMFEDLLPYRNDERCHARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCYIRQVSHGSDXXXXXXXXXLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSA 698
            +G I++ ++F ++L  RND RC A GFYTYDAFI AA +FP FG SG++T R++EIAAFF QT HETTGG   A    +  GYC++RQ                  +YYGRGPIQLT   NY + G A+  DL+NNPDL+ATD  +SFK+AIWFWMT Q  KPS H+VII  W PSA
Sbjct:   27 IGSIVTNDLFNEMLKNRNDGRCPANGFYTYDAFIAAANSFPGFGTSGDDTARRKEIAAFFGQTSHETTGGSLSAE--PFTGGYCFVRQNDQSD-------------RYYGRGPIQLTNQNNYEKAGNAIRQDLVNNPDLVATDATISFKTAIWFWMTPQDNKPSSHDVIIGSWTPSA 188          
BLAST of EY692470 vs. ExPASy Swiss-Prot
Match: CHIB_POPTR (Acidic endochitinase WIN6.2B OS=Populus trichocarpa PE=2 SV=2)

HSP 1 Score: 189.119 bits (479), Expect = 8.253e-48
Identity = 94/196 (47.96%), Postives = 113/196 (57.65%), Query Frame = 3
Query:  111 GSGAVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDERCHARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCYIRQVSHGSDXXXXXXXXXLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSA 698
            G G   G    G G   G L  II   MF+D+L YRND +C A GFYTY+AFI AAK FP FGN+G++ MRKREIAAF  QT HET G WP A G +Y WGYC++                                N NY  CG+ L + LL  P+L+ TDP ++FK+A+WFWMT Q PKPSCH VI + W PSA
Sbjct:   66 GGGGGGGGGGGGGGGGDGYLSDIIPESMFDDMLKYRNDPQCPAVGFYTYNAFISAAKEFPDFGNTGDDLMRKREIAAFLGQTSHETNGWWPAAQGDQYDWGYCHM--------------------------------NYNYGLCGDDLNLPLLQEPELVETDPFIAFKTALWFWMTPQSPKPSCHAVITESWTPSA 229          

HSP 2 Score: 21.9422 bits (45), Expect = 8.253e-48
Identity = 8/14 (57.14%), Postives = 10/14 (71.43%), Query Frame = 2
Query:  701 DVNASRLPGYGLTT 742
            D  A R+PGYG+ T
Sbjct:  231 DSEAGRVPGYGVIT 244          
The following BLAST results are available for this feature:
BLAST of EY692470 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
CHI1_ORYSJ1.333e-5448.13Chitinase 1 OS=Oryza sativa subsp. japonica GN=Cht... [more]
CHIA_SOLLC2.961e-5453.26Acidic 26 kDa endochitinase OS=Solanum lycopersicu... [more]
CHIA_SOLCI7.317e-5454.35Acidic endochitinase pcht28 OS=Solanum chilense PE... [more]
CHI12_ORYSJ2.676e-5248.54Chitinase 12 OS=Oryza sativa subsp. japonica GN=Ch... [more]
CHIB_SOLLC4.015e-5253.55Acidic 27 kDa endochitinase OS=Solanum lycopersicu... [more]
CHIT_PETHY3.802e-5153.55Acidic endochitinase OS=Petunia hybrida PE=2 SV=1[more]
CHI8_ORYSJ5.382e-5048.48Chitinase 8 OS=Oryza sativa subsp. japonica GN=Cht... [more]
CHIQ_TOBAC4.485e-4953.11Acidic endochitinase Q OS=Nicotiana tabacum PE=1 S... [more]
CHIP_TOBAC9.256e-4953.67Acidic endochitinase P OS=Nicotiana tabacum PE=1 S... [more]
CHIB_POPTR8.253e-4847.96Acidic endochitinase WIN6.2B OS=Populus trichocarp... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-001-A04-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692470 ID=EY692470; Name=EY692470; organism=Citrus sinensis; type=EST; length=915bp
CCACGCGTCCGTGATATCATAACTCTTGCTTTCAAATGAGGCTCATTGGG
TCCTTACTAATTTTCTCTCTAGTTTTATCTTTTGTACAAGGAGGTTCAGC
ACAGAATTGTGGAAGCGGCGCTGTGTGCGGTGAACGTGATACTGGCCACG
GGACGGATGGCGGTGAACTGGGCAAGATCATCTCAAGGGAGATGTTTGAA
GACTTGCTTCCGTATAGAAATGATGAACGATGCCATGCCAGAGGCTTCTA
CACTTATGATGCTTTTATAGAGGCAGCCAAAGCTTTTCCAGCCTTTGGTA
ACTCTGGAAATGAAACCATGCGTAAAAGAGAAATTGCTGCCTTTTTTGCC
CAAACTGGCCATGAAACTACTGGGGGATGGCCCGATGCACCTGGTGGAGA
ATATGCTTGGGGATATTGCTATATTAGGCAAGTTAGCCATGGGTCCGACT
ACTGTTATCCTTACTGTCCATGTCCCTTGCCAGGGCAATACTATGGCCGA
GGTCCAATTCAACTCACTTGGAATTGCAATTACTTAAGGTGCGGAGAAGC
CTTGGGGGTGGACTTGTTGAACAATCCAGACCTTCTTGCCACTGATCCAG
TACTATCATTCAAGTCAGCAATCTGGTTCTGGATGACTGCACAGCCACCA
AAGCCATCGTGCCACGAAGTCATTATCGACGAATGGAAACCATCAGCAAT
GACGTAAACGCCAGCCGGCTTCCGGGATACGGTCTAACCACAATATNANN
TCACGTGGAATTTTGATGTGCAANGTTGGAATAGCTTTGTAGCTAACCGT
ATGGGGTCTTTACACTTTCTGTGGCAAGTTGGGATTCAGCTGGCGACATC
TTGATGCTACACCANGGNCCTTATGGCCTATTTGATGGCCATCTATTGAT
CTCATGATCACGTTT
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