EY692468
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY692468 vs. ExPASy Swiss-Prot
Match: RL2_HAHCH (50S ribosomal protein L2 OS=Hahella chejuensis (strain KCTC 2396) GN=rplB PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 5.333e-12 Identity = 36/70 (51.43%), Postives = 50/70 (71.43%), Query Frame = 3 Query: 258 LRQFTLGKGKSAGRNSSGRITIFHRGGGSKRLQRRIDLKRTTSSI-GIVERVEYDPNRSSWIAPVRWIEG 464 L T K K+ GRN++GRIT+ H+GGG K+L R ID KRT I +VER+EYDPNR++ IA +++ +G Sbjct: 30 LASLTEKKRKNGGRNNAGRITVRHQGGGHKQLYRVIDFKRTKDGIPAVVERLEYDPNRTAHIALLKYADG 99
BLAST of EY692468 vs. ExPASy Swiss-Prot
Match: RL2_RHOPB (50S ribosomal protein L2 OS=Rhodopseudomonas palustris (strain BisB18) GN=rplB PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 6.965e-12 Identity = 38/87 (43.68%), Postives = 58/87 (66.67%), Query Frame = 3 Query: 213 MGTKQAMTKFKEVRALRQFTLGKGKSAGRNSSGRITIFHRGGGSKRLQRRIDLKRTTSSI-GIVERVEYDPNRSSWIAPVRWIEGVQ 470 M + A+ K K V++L T GK + GRN++GRI + RGGG K+ R +D KRT + +VER+EYDPNR+++IA +++ +G Q Sbjct: 18 MVDRSALYKGKPVKSL---TEGKHSAGGRNNTGRIVVRFRGGGHKQTYRIVDFKRTKVDMPAVVERLEYDPNRTAFIALIKYTDGTQ 101
BLAST of EY692468 vs. ExPASy Swiss-Prot
Match: RL2_ROSDO (50S ribosomal protein L2 OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=rplB PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 9.097e-12 Identity = 35/74 (47.30%), Postives = 51/74 (68.92%), Query Frame = 3 Query: 252 RALRQFTLGKGKSAGRNSSGRITIFHRGGGSKRLQRRIDLKRTTSSI-GIVERVEYDPNRSSWIAPVRWIEGVQ 470 R ++ T G K GRN++GRIT+ +GGG+KRL R +D KR + VER+EYDPNR+++IA V++ +G Q Sbjct: 28 RPVKALTEGLSKHGGRNNTGRITMRRKGGGAKRLYRIVDFKRNKMDVAATVERIEYDPNRTAFIALVKYEDGEQ 101
BLAST of EY692468 vs. ExPASy Swiss-Prot
Match: RL2_RHOP5 (50S ribosomal protein L2 OS=Rhodopseudomonas palustris (strain BisA53) GN=rplB PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 9.097e-12 Identity = 39/87 (44.83%), Postives = 57/87 (65.52%), Query Frame = 3 Query: 213 MGTKQAMTKFKEVRALRQFTLGKGKSAGRNSSGRITIFHRGGGSKRLQRRIDLKRTTSSI-GIVERVEYDPNRSSWIAPVRWIEGVQ 470 M + A+ K K V+ L T GK + GRN++GRIT+ RGGG K+ R +D KRT + VER+EYDPNR+++IA +++ +G Q Sbjct: 18 MVDRSALYKGKPVKVL---TEGKHSNGGRNNTGRITVRFRGGGHKKTYRIVDFKRTKVDVPAKVERLEYDPNRTAFIALIKYADGEQ 101
BLAST of EY692468 vs. ExPASy Swiss-Prot
Match: RL2_ORITI (50S ribosomal protein L2 OS=Orientia tsutsugamushi (strain Ikeda) GN=rplB PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 9.097e-12 Identity = 36/72 (50.00%), Postives = 50/72 (69.44%), Query Frame = 3 Query: 252 RALRQFTLGKGKSAGRNSSGRITIFHRGGGSKRLQRRIDLKRTTSSI-GIVERVEYDPNRSSWIAPVRWIEG 464 R L++ G K+ GRN+ GRITI+HRG G K+L R ID KR I VER+EYDPNR+++IA +++ +G Sbjct: 28 RPLKKLAKGITKTGGRNNLGRITIWHRGKGHKQLYRMIDFKRRVFDIYATVERIEYDPNRTAFIALIKYDDG 99
BLAST of EY692468 vs. ExPASy Swiss-Prot
Match: RL2_METNO (50S ribosomal protein L2 OS=Methylobacterium nodulans (strain ORS2060 / LMG 21967) GN=rplB PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 9.097e-12 Identity = 40/85 (47.06%), Postives = 53/85 (62.35%), Query Frame = 3 Query: 222 KQAMTKFKEVRALRQFTLGKGKSAGRNSSGRITIFHRGGGSKRLQRRIDLKRT--TSSIGIVERVEYDPNRSSWIAPVRWIEGVQ 470 + + K K V+AL T GK S GRN+ GR+T+ RGGG KR R +D KR +G VER+EYDPNR+++IA V + G Q Sbjct: 21 RSELYKGKPVKAL---TEGKISSGGRNNLGRVTVRFRGGGHKRTLRNVDFKRREHAGKVGTVERIEYDPNRTAFIALVTYEGGAQ 102
BLAST of EY692468 vs. ExPASy Swiss-Prot
Match: RL2_BRAJA (50S ribosomal protein L2 OS=Bradyrhizobium japonicum GN=rplB PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 9.097e-12 Identity = 41/87 (47.13%), Postives = 57/87 (65.52%), Query Frame = 3 Query: 213 MGTKQAMTKFKEVRALRQFTLGKGKSAGRNSSGRITIFHRGGGSKRLQRRIDLKR-TTSSIGIVERVEYDPNRSSWIAPVRWIEGVQ 470 M + A+ K K V+AL T GK S GRN++GRIT+ RGGG K+ R +D KR + VER+EYDPNR+++IA V++ +G Q Sbjct: 18 MVDRSALYKGKPVKAL---TEGKHSSGGRNNTGRITVRFRGGGHKQTLRIVDFKRDKVDAPATVERLEYDPNRTAFIALVKYEDGTQ 101
BLAST of EY692468 vs. ExPASy Swiss-Prot
Match: RL2_RHOPT (50S ribosomal protein L2 OS=Rhodopseudomonas palustris (strain TIE-1) GN=rplB PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.188e-11 Identity = 39/87 (44.83%), Postives = 57/87 (65.52%), Query Frame = 3 Query: 213 MGTKQAMTKFKEVRALRQFTLGKGKSAGRNSSGRITIFHRGGGSKRLQRRIDLKRTTSSI-GIVERVEYDPNRSSWIAPVRWIEGVQ 470 M + A+ K K V+ L T GK + GRN++GRIT+ RGGG K+ R +D KRT + VER+EYDPNR+++IA +++ +G Q Sbjct: 18 MVDRSALYKGKPVKRL---TEGKNSNGGRNNTGRITVRFRGGGHKQAYRLVDFKRTKVDVPAKVERLEYDPNRTAFIALIKYEDGEQ 101
BLAST of EY692468 vs. ExPASy Swiss-Prot
Match: RL2_RHOPA (50S ribosomal protein L2 OS=Rhodopseudomonas palustris GN=rplB PE=1 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.188e-11 Identity = 39/87 (44.83%), Postives = 57/87 (65.52%), Query Frame = 3 Query: 213 MGTKQAMTKFKEVRALRQFTLGKGKSAGRNSSGRITIFHRGGGSKRLQRRIDLKRTTSSI-GIVERVEYDPNRSSWIAPVRWIEGVQ 470 M + A+ K K V+ L T GK + GRN++GRIT+ RGGG K+ R +D KRT + VER+EYDPNR+++IA +++ +G Q Sbjct: 18 MVDRSALYKGKPVKRL---TEGKNSNGGRNNTGRITVRFRGGGHKQAYRLVDFKRTKVDVPAKVERLEYDPNRTAFIALIKYEDGEQ 101
BLAST of EY692468 vs. ExPASy Swiss-Prot
Match: RL2_RHOP2 (50S ribosomal protein L2 OS=Rhodopseudomonas palustris (strain HaA2) GN=rplB PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.188e-11 Identity = 39/87 (44.83%), Postives = 57/87 (65.52%), Query Frame = 3 Query: 213 MGTKQAMTKFKEVRALRQFTLGKGKSAGRNSSGRITIFHRGGGSKRLQRRIDLKRTTSSI-GIVERVEYDPNRSSWIAPVRWIEGVQ 470 M + A+ K K V+ L T GK + GRN++GRIT+ RGGG K+ R +D KRT + VER+EYDPNR+++IA +++ +G Q Sbjct: 18 MVDRSALYKGKPVKTL---TEGKHSNGGRNNTGRITVRFRGGGHKKTYRLVDFKRTKVDVPAKVERLEYDPNRTAFIALIKYEDGEQ 101 The following BLAST results are available for this feature:
BLAST of EY692468 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 83
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY692468 ID=EY692468; Name=EY692468; organism=Citrus sinensis; type=EST; length=918bpback to top |