EY692468
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY692468 vs. ExPASy Swiss-Prot
Match: RL2_METRJ (50S ribosomal protein L2 OS=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) GN=rplB PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.188e-11 Identity = 40/86 (46.51%), Postives = 57/86 (66.28%), Query Frame = 3 Query: 222 KQAMTKFKEVRALRQFTLGKGKSAGRNSSGRITIFHRGGGSKRLQRRIDLKRTTSSIGI---VERVEYDPNRSSWIAPVRWIEGVQ 470 ++ + K K V+AL T GK S GRN+ GRIT+ RGGG KR+ R +D KR +G+ VER+EYDPNR+++IA + + +G Q Sbjct: 21 RRELYKGKPVKAL---TEGKSSSGGRNNLGRITVRFRGGGHKRVLRNVDFKR-RDQLGVAATVERIEYDPNRTAFIALINFPDGKQ 102
BLAST of EY692468 vs. ExPASy Swiss-Prot
Match: RL2_THICR (50S ribosomal protein L2 OS=Thiomicrospira crunogena (strain XCL-2) GN=rplB PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.552e-11 Identity = 33/63 (52.38%), Postives = 47/63 (74.60%), Query Frame = 3 Query: 279 KGKSAGRNSSGRITIFHRGGGSKRLQRRIDLKRTTSSI-GIVERVEYDPNRSSWIAPVRWIEG 464 K KS GRNS+GRIT+ H+GGG K+ R+ID KR + +VER+EYDPNR++ IA +++ +G Sbjct: 38 KSKSGGRNSNGRITVRHQGGGHKQHYRQIDFKRNKDGVAAVVERLEYDPNRTAHIALLKYADG 100
BLAST of EY692468 vs. ExPASy Swiss-Prot
Match: RL2_METS4 (50S ribosomal protein L2 OS=Methylobacterium sp. (strain 4-46) GN=rplB PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 2.027e-11 Identity = 40/85 (47.06%), Postives = 53/85 (62.35%), Query Frame = 3 Query: 222 KQAMTKFKEVRALRQFTLGKGKSAGRNSSGRITIFHRGGGSKRLQRRIDLKRT--TSSIGIVERVEYDPNRSSWIAPVRWIEGVQ 470 + + K K V+AL T GK S GRN+ GR+T+ RGGG KR R +D KR +G VER+EYDPNR+++IA V + G Q Sbjct: 21 RSELYKGKPVKAL---TEGKISSGGRNNLGRVTVRFRGGGHKRTLRNVDFKRREFAGKVGTVERIEYDPNRTAFIALVSYEGGGQ 102
BLAST of EY692468 vs. ExPASy Swiss-Prot
Match: RL2_LACS1 (50S ribosomal protein L2 OS=Lactobacillus salivarius subsp. salivarius (strain UCC118) GN=rplB PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 2.027e-11 Identity = 37/90 (41.11%), Postives = 54/90 (60.00%), Query Frame = 3 Query: 204 GNRMGTKQAMTKFKEVRALRQFTLGKGKSAGRNSSGRITIFHRGGGSKRLQRRIDLKRTTSSI-GIVERVEYDPNRSSWIAPVRWIEGVQ 470 G R T + + + + + K K+AGRN+ GRIT+ HRGGG KR R ID KR ++ V+ +EYDPNRS+ IA + + +GV+ Sbjct: 12 GRRNMTGSDFAEITKTKPEKSLLVSKSKTAGRNAYGRITVRHRGGGHKRKYRLIDFKRVKDNVPATVKAIEYDPNRSANIALLVYADGVK 101
BLAST of EY692468 vs. ExPASy Swiss-Prot
Match: RL2_HALHL (50S ribosomal protein L2 OS=Halorhodospira halophila (strain DSM 244 / SL1) GN=rplB PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 2.027e-11 Identity = 39/88 (44.32%), Postives = 52/88 (59.09%), Query Frame = 3 Query: 204 GNRMGTKQAMTKFKEVRALRQFTLGKGKSAGRNSSGRITIFHRGGGSKRLQRRIDLKRTTSSI-GIVERVEYDPNRSSWIAPVRWIEG 464 G R K + + + K K+ GRNS+GRIT HRGGG K+ R+ID KR + + G VER+EYDPNRS+ IA V + +G Sbjct: 12 GRRFVVKTKDARLHQGGPYEPLVVQKSKTGGRNSNGRITTRHRGGGHKQRYRQIDFKRNKTGVPGKVERLEYDPNRSANIALVLYQDG 99
BLAST of EY692468 vs. ExPASy Swiss-Prot
Match: RM02_ACACA (60S ribosomal protein L2, mitochondrial OS=Acanthamoeba castellanii GN=RPL2 PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.647e-11 Identity = 37/73 (50.68%), Postives = 48/73 (65.75%), Query Frame = 3 Query: 252 RALRQFTLGKGKSAGRNSSGRITIFHRGGGSKRLQRRIDLKRTTSSI-GIVERVEYDPNRSSWIAPVRWIEGV 467 R ++ T G + +GRN+ GRIT +HRGGG KR+ R ID KR +I G V RVEYDP R+S IA + + GV Sbjct: 9 RPIKNLTFGLKRISGRNNQGRITRYHRGGGVKRMGRLIDYKRYIWNIFGFVHRVEYDPKRNSLIALIVYSNGV 81
BLAST of EY692468 vs. ExPASy Swiss-Prot
Match: RL2_ALCBS (50S ribosomal protein L2 OS=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) GN=rplB PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.647e-11 Identity = 33/63 (52.38%), Postives = 47/63 (74.60%), Query Frame = 3 Query: 279 KGKSAGRNSSGRITIFHRGGGSKRLQRRIDLKRTTSSI-GIVERVEYDPNRSSWIAPVRWIEG 464 K K+ GRN++GRIT H+GGG K+ R ID +R I G+VER+EYDPNR++ IA V++++G Sbjct: 37 KAKNGGRNNNGRITTRHKGGGHKQKYRVIDFRRNKDGIAGVVERLEYDPNRTAHIALVKYLDG 99
BLAST of EY692468 vs. ExPASy Swiss-Prot
Match: RL2_RHORT (50S ribosomal protein L2 OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=rplB PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 3.457e-11 Identity = 35/74 (47.30%), Postives = 52/74 (70.27%), Query Frame = 3 Query: 252 RALRQFTLGKGKSAGRNSSGRITIFHRGGGSKRLQRRIDLKRTTSSI-GIVERVEYDPNRSSWIAPVRWIEGVQ 470 + +++ T G K+ GRN+ GR+T + RGGG+KR R ID KRT + G VER+EYDPNR+++IA + + +G Q Sbjct: 28 KPVKKLTEGLVKTGGRNNHGRVTSWWRGGGNKRRYRLIDFKRTKVDVAGRVERLEYDPNRTAFIALITYEDGEQ 101
BLAST of EY692468 vs. ExPASy Swiss-Prot
Match: RL2_RHOPS (50S ribosomal protein L2 OS=Rhodopseudomonas palustris (strain BisB5) GN=rplB PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 3.457e-11 Identity = 38/84 (45.24%), Postives = 57/84 (67.86%), Query Frame = 3 Query: 222 KQAMTKFKEVRALRQFTLGKGKSAGRNSSGRITIFHRGGGSKRLQRRIDLKRTTSSI-GIVERVEYDPNRSSWIAPVRWIEGVQ 470 + A+ K K V++L T GK + GRN++GRIT+ RGGG K+ R +D KRT + VER+EYDPNR+++IA +++ +G Q Sbjct: 21 RSALYKGKPVKSL---TEGKISNGGRNNTGRITVRFRGGGHKQTYRIVDFKRTKVDVPAKVERLEYDPNRTAFIALIKYEDGEQ 101
BLAST of EY692468 vs. ExPASy Swiss-Prot
Match: RL2_OCHA4 (50S ribosomal protein L2 OS=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) GN=rplB PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 3.457e-11 Identity = 38/82 (46.34%), Postives = 54/82 (65.85%), Query Frame = 3 Query: 222 KQAMTKFKEVRALRQFTLGKGKSAGRNSSGRITIFHRGGGSKRLQRRIDLK-RTTSSIGIVERVEYDPNRSSWIAPVRWIEG 464 + + K K V++L T G K GRN++GRIT+ +GGG KR R ID K R +G VER+EYDPNR+++IA +R+ +G Sbjct: 21 RSGLYKGKPVKSL---TEGLSKKGGRNNTGRITVRFQGGGHKRTYRFIDFKRRKLDVVGTVERLEYDPNRTAFIALIRYEDG 99 The following BLAST results are available for this feature:
BLAST of EY692468 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 83
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Sequences
The
following sequences are available for this feature:
EST sequence >EY692468 ID=EY692468; Name=EY692468; organism=Citrus sinensis; type=EST; length=918bpback to top |