EY692466

Overview
NameEY692466
Unique NameEY692466
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length971
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692466 vs. ExPASy Swiss-Prot
Match: NEK8_HUMAN (Serine/threonine-protein kinase Nek8 OS=Homo sapiens GN=NEK8 PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.989e-12
Identity = 54/182 (29.67%), Postives = 87/182 (47.80%), Query Frame = 2
Query:    2 WGR--YGNLGLGDRNDRLIPEKVATVDLQREKMVMVACGWRHTISVSSSGRLYSYGWSKYGQLG--HGDFKDHLVPCQL--EALRESFISQ----------ISGGWRHTMALTSDGKLYGWGWNKFGQVGVGDNVDHCSPVQVKFPLDQKVVQISCGWRHTLAVTERQNVFSWGKGTNGQLG 499
            WGR   G LGLG R     P++V     Q  + V+  CG   ++ ++  G+  + G +++ +LG  H    +  VP Q   EAL  + +            I  G  H+ A+T+ G  Y +G N+ GQ+G        +P +V+     K+  ++CG   T+A+     V+SWGKG  G+LG
Sbjct:  467 WGRGDSGRLGLGTRESHSCPQQVPMPPGQEAQRVV--CGIDSSMILTVPGQALACGSNRFNKLGLDHLSLGEEPVPHQQVEEALSFTLLGSAPLDQEPLLSIDLGTAHSAAVTASGDCYTFGSNQHGQLGTNTRRGSRAPCKVQGLEGIKMAMVACGDAFTVAIGAESEVYSWGKGARGRLG 646          

HSP 2 Score: 72.4034 bits (176), Expect = 4.432e-12
Identity = 40/133 (30.08%), Postives = 66/133 (49.62%), Query Frame = 2
Query:  101 VACGWRHTISVSSSGRLYSYGWSKYGQLGHGDFKDHLVPCQLEALRESFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGDNVDHCSPVQVKFPLDQKVVQISCGWRHTLAVTERQNVFSWGKGTNGQLG 499
            VACG   T  ++  G + ++G    G LGHG   D   P  +EAL    + Q++ G  H +AL+++ +L+ WG    G++G+G    H  P QV  P  Q+  ++ CG   ++ +T      + G     +LG
Sbjct:  396 VACGDFFTACLTDRGIIMTFGSGSNGCLGHGSLTDISQPTIVEALLGYEMVQVACGASHVLALSTERELFAWGRGDSGRLGLGTRESHSCPQQVPMPPGQEAQRVVCGIDSSMILTVPGQALACGSNRFNKLG 528          
BLAST of EY692466 vs. ExPASy Swiss-Prot
Match: NEK8_DANRE (Serine/threonine-protein kinase Nek8 OS=Danio rerio GN=nek8 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.598e-12
Identity = 38/133 (28.57%), Postives = 69/133 (51.88%), Query Frame = 2
Query:  101 VACGWRHTISVSSSGRLYSYGWSKYGQLGHGDFKDHLVPCQLEALRESFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGDNVDHCSPVQVKFPLDQKVVQISCGWRHTLAVTERQNVFSWGKGTNGQLG 499
            V+CG   T  ++  G + ++G    G LGHG+F D   P  +EAL    + Q+S G  H +A+T++ +++ WG    G++G+     H  P QV  P D +  ++ CG   ++ ++ +  + + G     +LG
Sbjct:  403 VSCGDLFTTCLTDRGIIMTFGSGSNGCLGHGNFNDVTQPKIVEALLGYELVQVSCGASHVLAVTNEREVFSWGRGDNGRLGLATQDSHNCPQQVSLPADFEAQRVLCGVDCSMIMSTQHQILACGNNRFNKLG 535          

HSP 2 Score: 68.9366 bits (167), Expect = 4.900e-11
Identity = 48/149 (32.21%), Postives = 76/149 (51.01%), Query Frame = 2
Query:   89 KMVMVACGWRHTISVSSSGRLYSYGWSKYGQLGHGDFKDHLVPCQLEALRESFISQ------------ISGGWRHTMALTSDGKLYGWGWNKFGQVGVGDNVDHCSPVQVKFPLDQKVVQISCGWRHTLAVTERQNVFSWGKGTNGQLG 499
            +++ V+ G    + V+ SGRL ++   +   +G G+     +P  +E ++  FIS+            +S G   T  LT  G +  +G    G +G G+  D   P  V+  L  ++VQ+SCG  H LAVT  + VFSWG+G NG+LG
Sbjct:  341 EVIQVSLGRTQKMGVTKSGRLITW---EAPSVGSGE---PTLPGAVEQMQPQFISRFLEGQSGVTIKSVSCGDLFTTCLTDRGIIMTFGSGSNGCLGHGNFNDVTQPKIVEALLGYELVQVSCGASHVLAVTNEREVFSWGRGDNGRLG 483          
BLAST of EY692466 vs. ExPASy Swiss-Prot
Match: IBTK_XENLA (Inhibitor of Bruton tyrosine kinase OS=Xenopus laevis GN=ibtk PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 4.432e-12
Identity = 57/173 (32.95%), Postives = 89/173 (51.45%), Query Frame = 2
Query:    2 WGRYGN--LGLGDRNDRLIPEKVATVDLQREKMV-MVACGWRHTISVSSSGRLYSYGWSKYGQLGHGDFKDHLVPCQLEALRESFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGV---GDNVDHCSPVQVKFPLDQKVVQISCGWRHTLAVTERQNVFSWGKGTNGQLGH 502
            WG   N  LG G +  +  PE V         +  MV C + H++ +S  G++Y+ G  + G+LGHGD    LVP  +E LR    +Q++G   HT+ LT DG +Y +G N F Q+G+     N +    +Q K    + V+ ++ G  HT+  T +  V++ G    GQLG+
Sbjct:  148 WGDNVNFTLGHGTQQSKHHPELVEMFPRSGVYIKQMVLCKF-HSVFLSQKGQVYTCGHGQGGRLGHGDELTCLVPRLVEGLRGHPCTQVAGAKDHTVVLTEDGYVYTFGLNTFHQLGIQPPPPNSNVPRQIQAKTMKGKTVLGVAAGRFHTVLWT-KDAVYTVGL-NGGQLGY 317          
BLAST of EY692466 vs. ExPASy Swiss-Prot
Match: RCCDC_DICDI (RCC1 repeat-containing protein DDB_G0284033 OS=Dictyostelium discoideum GN=DDB_G0284033 PE=4 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 5.788e-12
Identity = 48/151 (31.79%), Postives = 83/151 (54.97%), Query Frame = 2
Query:  101 VACGWRHTISVSSSGRLYSYGWSKYGQLGHGDFKDHLVPCQL--EALRESFISQISGGWRHTMALTSDGKLYGWGWNKFGQ-VGVGDNVDHCSPVQVKFPLD-------QKVVQISCGWRHTLAVTERQNVFSWGKGTNGQLGHGESSDRK 523
            ++ G   TI++S+ G+LYS+G S + +LG+GD  +   P  +  + L+++ I  +  G+ HT+ALTSD K+  WG N+  Q   V +     S   V++ LD        K++QI     ++  +TE  N++S G   +GQ G  +S+ +K
Sbjct:  247 ISMGATFTIALSNDGKLYSFGSSTFNELGNGDMFNEREPKLIDNQLLQDNEIIDLECGFFHTVALTSDNKILTWGRNQESQCFPVPEGTGKGSFTNVQY-LDTSSLGDHDKIIQIGASNLNSYILTENGNIYSIGSNDHGQCGIEKSNFKK 396          
BLAST of EY692466 vs. ExPASy Swiss-Prot
Match: SPKUL_DICDI (Bifunctional serine/threonine-protein kinase/NEDD4-like E3 ubiquitin-protein ligase OS=Dictyostelium discoideum GN=DDB_G0276527 PE=3 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 1.289e-11
Identity = 46/180 (25.56%), Postives = 93/180 (51.67%), Query Frame = 2
Query:    5 GRYGNLGLGDRNDRLIPEKVATVDLQREKMVMVACGWRHTISVSSSGRLYSYGWSKYGQLGHGDFKD-HLVPCQLEALRES--------FISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGDNV--DHCSPVQVKFPL----DQKVVQISCGWRHTLAVTERQNVFSWGKGTNGQLG 499
            G +G LGLG+++  +         LQ   ++ ++ G  H++ +++ G ++S+G +  GQLG G F +   +P Q++  + S         I ++S G  H++A++ +   Y WG + +G +G   +V  D   PV +        + K + +S G++H +A++   +++SWG     +LG
Sbjct:  365 GDHGRLGLGEQSLLMQSTPKLVQSLQGHFIIDMSSGGGHSLVLTNKGLVFSFGRNDQGQLGIGCFSNQQTIPKQIQWFQTSQQQQQQPINIIKVSAGGYHSIAISDNNDTYAWGRSDYGVLGTSIDVQGDRNLPVLINSNSVVVDNVKFIDVSSGFQHNVAMSIDGSLYSWGCNAGQRLG 544          
The following BLAST results are available for this feature:
BLAST of EY692466 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 45
Match NameE-valueIdentityDescription
NEK8_HUMAN1.989e-1229.67Serine/threonine-protein kinase Nek8 OS=Homo sapie... [more]
NEK8_DANRE2.598e-1228.57Serine/threonine-protein kinase Nek8 OS=Danio reri... [more]
IBTK_XENLA4.432e-1232.95Inhibitor of Bruton tyrosine kinase OS=Xenopus lae... [more]
RCCDC_DICDI5.788e-1231.79RCC1 repeat-containing protein DDB_G0284033 OS=Dic... [more]
SPKUL_DICDI1.289e-1125.56Bifunctional serine/threonine-protein kinase/NEDD4... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C2-003-071-H11-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692466 ID=EY692466; Name=EY692466; organism=Citrus sinensis; type=EST; length=971bp
CTGGGGCCGTTATGGAAATTTGGGTTTAGGTGATAGAAATGATCGCTTAA
TCCCTGAGAAAGTTGCTACAGTCGATTTGCAGAGAGAAAAGATGGTTATG
GTTGCTTGTGGATGGAGACACACCATATCTGTTTCCTCTTCTGGTAGGTT
GTACAGTTATGGATGGAGCAAATATGGTCAACTAGGCCATGGGGATTTTA
AGGATCATCTTGTTCCTTGTCAGCTGGAAGCTTTGCGTGAAAGTTTTATT
TCTCAGATCTCGGGTGGTTGGAGACACACTATGGCACTCACATCTGATGG
AAAACTTTATGGCTGGGGATGGAATAAGTTTGGACAGGTTGGAGTTGGTG
ACAATGTTGATCATTGCTCTCCGGTGCAAGTCAAATTTCCTCTTGACCAG
AAAGTAGTCCAGATTTCATGTGGTTGGAGACATACTCTTGCTGTCACCGA
AAGGCAAAATGTATTTTCTTGGGGAAAAGGTACGAATGGGCAGCTTGGGC
ACGGGGAATCTTCTGACCGAAAATTCTTCCAAAGATCATAGAGCCGTTGA
GTCTGGATGGATCGAAAGGGCAAAAATATTAGCATCCTCAAATTATGGAT
TCCTTCATCAGGAAAAAACATGGGTCTTCACCATCAGAAAAAATATGCAG
TTGGTTTCCTGAATGAATACTGGTCCAGGGGGCAAAACAGTGTTACGGGA
AAGGGGTAACGGGGAAGTGAGGTTAGTGTTCCCCGAAGGGGGATGTTTAA
ACGGGAAACGGGTTCTTAATGTTTCTCAAACTTTCTGGGGTATCAGGAAA
AGAACTTGGTCCAGGGCCCTTTTAATCTTTAGAAATGGCCGATATAAAAC
ACCGGGGAATTGGCCATATTTTTAACTTTTATTTTTAAAGACCCCCCACT
CTAATTTAGAAAAAAGGGCCTTTTTCACTCTGAGGGAAAGTTTTTTTTCT
CCTTTTATTGTGGGTATTTTT
back to top