EY692075

Overview
NameEY692075
Unique NameEY692075
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length540
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692075 vs. ExPASy Swiss-Prot
Match: GLN12_ORYSJ (Glutamine synthetase cytosolic isozyme 1-2 OS=Oryza sativa subsp. japonica GN=GLN1-2 PE=1 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 2.502e-39
Identity = 76/83 (91.57%), Postives = 77/83 (92.77%), Query Frame = 3
Query:   33 LGKRHGEHTAAYGEGNERRLTGRHETADINTFSWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAETTILWK 281
            L  RH EH AAYGEGNERRLTGRHETADINTF WGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVT MIAETT+LWK
Sbjct:  273 LALRHKEHIAAYGEGNERRLTGRHETADINTFKWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTGMIAETTLLWK 355          
BLAST of EY692075 vs. ExPASy Swiss-Prot
Match: GLNA1_PEA (Glutamine synthetase nodule isozyme OS=Pisum sativum GN=GS1 PE=2 SV=2)

HSP 1 Score: 160.999 bits (406), Expect = 3.268e-39
Identity = 77/84 (91.67%), Postives = 80/84 (95.24%), Query Frame = 3
Query:   33 LGKRHGEHTAAYGEGNERRLTGRHETADINTFSWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAETTILWKP 284
            LGKR  EH +AYGEGNERRLTG+HETADINTFSWGVANRGAS+RVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAETTIL KP
Sbjct:  272 LGKRLPEHISAYGEGNERRLTGKHETADINTFSWGVANRGASVRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAETTILLKP 355          
BLAST of EY692075 vs. ExPASy Swiss-Prot
Match: GLNA_LUPLU (Glutamine synthetase nodule isozyme OS=Lupinus luteus PE=3 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 7.281e-39
Identity = 76/81 (93.83%), Postives = 78/81 (96.30%), Query Frame = 3
Query:   33 LGKRHGEHTAAYGEGNERRLTGRHETADINTFSWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAETTIL 275
            LGKRH EH AAYGEGNERRLTGRHETADI+TF WGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAETT+L
Sbjct:  273 LGKRHNEHIAAYGEGNERRLTGRHETADISTFFWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAETTLL 353          
BLAST of EY692075 vs. ExPASy Swiss-Prot
Match: GLN14_ARATH (Glutamine synthetase cytosolic isozyme 1-4 OS=Arabidopsis thaliana GN=GLN1-4 PE=1 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 7.281e-39
Identity = 75/84 (89.29%), Postives = 78/84 (92.86%), Query Frame = 3
Query:   33 LGKRHGEHTAAYGEGNERRLTGRHETADINTFSWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAETTILWKP 284
            LG RH EH AAYGEGNERRLTG+HETADINTF WGVANRGASIRVGRDTE+ GKGYFEDRRPASNMDPY VTSMIAE+TILWKP
Sbjct:  273 LGLRHKEHIAAYGEGNERRLTGKHETADINTFLWGVANRGASIRVGRDTEQAGKGYFEDRRPASNMDPYTVTSMIAESTILWKP 356          
BLAST of EY692075 vs. ExPASy Swiss-Prot
Match: GLN13_ORYSJ (Glutamine synthetase cytosolic isozyme 1-3 OS=Oryza sativa subsp. japonica GN=GLN1-3 PE=2 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 7.281e-39
Identity = 73/84 (86.90%), Postives = 79/84 (94.05%), Query Frame = 3
Query:   33 LGKRHGEHTAAYGEGNERRLTGRHETADINTFSWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAETTILWKP 284
            LG RH EH AAYG+GNERRLTGRHETADIN F WGVANRGAS+RVGRDTEK+GKGYFEDRRPASNMDPY+VT+MIAETTILW+P
Sbjct:  275 LGMRHREHIAAYGDGNERRLTGRHETADINNFVWGVANRGASVRVGRDTEKDGKGYFEDRRPASNMDPYLVTAMIAETTILWEP 358          
BLAST of EY692075 vs. ExPASy Swiss-Prot
Match: GLN11_ORYSJ (Glutamine synthetase cytosolic isozyme 1-1 OS=Oryza sativa subsp. japonica GN=GLN1-1 PE=1 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 9.509e-39
Identity = 72/81 (88.89%), Postives = 78/81 (96.30%), Query Frame = 3
Query:   42 RHGEHTAAYGEGNERRLTGRHETADINTFSWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAETTILWKP 284
            RH EH +AYGEGNERRLTGRHETADINTFSWGVANRGAS+RVGR+TE+ GKGYFEDRRPASNMDPY+VTSMIAETTI+WKP
Sbjct:  276 RHKEHISAYGEGNERRLTGRHETADINTFSWGVANRGASVRVGRETEQNGKGYFEDRRPASNMDPYIVTSMIAETTIIWKP 356          
BLAST of EY692075 vs. ExPASy Swiss-Prot
Match: GLNA3_MAIZE (Glutamine synthetase root isozyme 3 OS=Zea mays GN=GLN4 PE=1 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 4.719e-38
Identity = 72/81 (88.89%), Postives = 77/81 (95.06%), Query Frame = 3
Query:   42 RHGEHTAAYGEGNERRLTGRHETADINTFSWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAETTILWKP 284
            RH EH AAYGEGN+ RLTGRHETADINTFSWGVANRGAS+RVGR+TE+ GKGYFEDRRPASNMDPYVVTSMIAETTI+WKP
Sbjct:  276 RHREHIAAYGEGNDGRLTGRHETADINTFSWGVANRGASVRVGRETEQNGKGYFEDRRPASNMDPYVVTSMIAETTIIWKP 356          
BLAST of EY692075 vs. ExPASy Swiss-Prot
Match: GLNA2_MAIZE (Glutamine synthetase root isozyme 2 OS=Zea mays GN=GLN2 PE=2 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 6.163e-38
Identity = 73/88 (82.95%), Postives = 79/88 (89.77%), Query Frame = 3
Query:   33 LGKRHGEHTAAYGEGNERRLTGRHETADINTFSWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAETTILWKP*KTN 296
            LG RH EH AAYG+GNER LTGRHETADINTF WGV NRGAS+RVGRDTEKEGKGYFEDRRPASNMDPYVVT +IAETT+LW+P  +N
Sbjct:  272 LGLRHREHIAAYGDGNERPLTGRHETADINTFVWGVPNRGASVRVGRDTEKEGKGYFEDRRPASNMDPYVVTCLIAETTMLWEPSHSN 359          
BLAST of EY692075 vs. ExPASy Swiss-Prot
Match: GLN13_ARATH (Glutamine synthetase cytosolic isozyme 1-3 OS=Arabidopsis thaliana GN=GLN1-3 PE=1 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 1.051e-37
Identity = 75/86 (87.21%), Postives = 80/86 (93.02%), Query Frame = 3
Query:   27 RVLGK---RHGEHTAAYGEGNERRLTGRHETADINTFSWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAETTIL 275
            + +GK   +H EH AAYGEGNERRLTG+HETADINTFSWGVANRGAS+RVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAETTIL
Sbjct:  268 KAIGKLQLKHKEHIAAYGEGNERRLTGKHETADINTFSWGVANRGASVRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAETTIL 353          
BLAST of EY692075 vs. ExPASy Swiss-Prot
Match: GLNA3_HORVU (Glutamine synthetase OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 1.793e-37
Identity = 71/81 (87.65%), Postives = 77/81 (95.06%), Query Frame = 3
Query:   42 RHGEHTAAYGEGNERRLTGRHETADINTFSWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAETTILWKP 284
            +H EH AAYGEGNERRLTG+HETADINT SWGVANRGAS+RVGR+TE+ GKGYFEDRRPASNMDPYVVTSMIA+TTILWKP
Sbjct:  276 KHKEHIAAYGEGNERRLTGKHETADINTSSWGVANRGASVRVGRETEQNGKGYFEDRRPASNMDPYVVTSMIAQTTILWKP 356          
The following BLAST results are available for this feature:
BLAST of EY692075 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
GLN12_ORYSJ2.502e-3991.57Glutamine synthetase cytosolic isozyme 1-2 OS=Oryz... [more]
GLNA1_PEA3.268e-3991.67Glutamine synthetase nodule isozyme OS=Pisum sativ... [more]
GLNA_LUPLU7.281e-3993.83Glutamine synthetase nodule isozyme OS=Lupinus lut... [more]
GLN14_ARATH7.281e-3989.29Glutamine synthetase cytosolic isozyme 1-4 OS=Arab... [more]
GLN13_ORYSJ7.281e-3986.90Glutamine synthetase cytosolic isozyme 1-3 OS=Oryz... [more]
GLN11_ORYSJ9.509e-3988.89Glutamine synthetase cytosolic isozyme 1-1 OS=Oryz... [more]
GLNA3_MAIZE4.719e-3888.89Glutamine synthetase root isozyme 3 OS=Zea mays GN... [more]
GLNA2_MAIZE6.163e-3882.95Glutamine synthetase root isozyme 2 OS=Zea mays GN... [more]
GLN13_ARATH1.051e-3787.21Glutamine synthetase cytosolic isozyme 1-3 OS=Arab... [more]
GLNA3_HORVU1.793e-3787.65Glutamine synthetase OS=Hordeum vulgare PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-106-D11-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692075 ID=EY692075; Name=EY692075; organism=Citrus sinensis; type=EST; length=540bp
CCGGGGAATTCCCGAGGGTCGACCCACGCGTCCTGGGGAAACGCCATGGG
GAACACACTGCTGCTTATGGAGAGGGCAACGAAAGAAGACTGACAGGTCG
ACATGAAACTGCAGATATCAACACTTTTTCTTGGGGTGTCGCTAACAGAG
GTGCCTCCATTCGCGTTGGTCGTGACACTGAGAAAGAAGGAAAGGGATAC
TTTGAAGACAGAAGGCCAGCTTCAAACATGGACCCATATGTTGTGACTTC
AATGATCGCTGAAACCACCATTCTCTGGAAGCCTTAGAAAACAAACTTGA
GCATGGATGACGAAGAAGAAATCGAGGGAAAATGAAAGCTTAAATTGAAC
CCACCACAAAAATAATTCTTATGTTTTTATAATTTGTCAATGCGTTTAAG
TCTGTTGTTTGAATTTGTTCCTTGCCATTCAAAACTGTACTCTGTTTCTC
TTGTTCCTCATTCTTTGGGATGCTCAGTTGTGATTACTATATTATAGTTT
AAAACTATTTCCCTTCTGTTTAAAAAAAAAAAAAAAAGGG
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