EY692075

Overview
NameEY692075
Unique NameEY692075
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length540
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692075 vs. ExPASy Swiss-Prot
Match: GLNA_XENLA (Glutamine synthetase OS=Xenopus laevis GN=glul PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 3.630e-22
Identity = 52/85 (61.18%), Postives = 60/85 (70.59%), Query Frame = 3
Query:   33 LGKRHGEHTAAY----GEGNERRLTGRHETADINTFSWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAETTIL 275
            LGKRH  H   Y    G+ N RRLTG+HET+ I+ FS GVANRGASIR+ R   +EG GYFEDRRPA+N DPY VT  +  TTIL
Sbjct:  277 LGKRHDYHICVYDPRGGKDNSRRLTGQHETSSIHEFSAGVANRGASIRIPRQVGQEGYGYFEDRRPAANCDPYAVTEALVRTTIL 361          
BLAST of EY692075 vs. ExPASy Swiss-Prot
Match: GLNA_SCHPO (Glutamine synthetase OS=Schizosaccharomyces pombe GN=gln1 PE=1 SV=2)

HSP 1 Score: 104.375 bits (259), Expect = 3.630e-22
Identity = 47/76 (61.84%), Postives = 59/76 (77.63%), Query Frame = 3
Query:   39 KRHGEHTAAYGEGNERRLTGRHETADINTFSWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAET 266
            KRH EH A YG+ N+ RLTGRHET  I+ F++GVA+RGAS+R+ R     G GYFEDRRPAS++DPY+VT +I ET
Sbjct:  280 KRHKEHIAVYGDDNDLRLTGRHETGSIDKFTYGVADRGASVRIPRSVAMNGCGYFEDRRPASSIDPYLVTGIITET 355          
BLAST of EY692075 vs. ExPASy Swiss-Prot
Match: GLNA_GIBFU (Glutamine synthetase OS=Gibberella fujikuroi GN=GLN1 PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 6.192e-22
Identity = 50/77 (64.94%), Postives = 57/77 (74.03%), Query Frame = 3
Query:   33 LGKRHGEHTAAYGEGNERRLTGRHETADINTFSWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAE 263
            L   H E  A YGE NE RLTGRHET  I++FSWGVANRG SIRV R+T  +G GYFEDRRPASN DPY VT ++ +
Sbjct:  273 LEPHHVECIAEYGEDNELRLTGRHETGSIDSFSWGVANRGTSIRVPRETAAKGYGYFEDRRPASNADPYRVTKVLLQ 349          
BLAST of EY692075 vs. ExPASy Swiss-Prot
Match: GLNA_FUSSH (Glutamine synthetase OS=Fusarium solani subsp. phaseoli GN=GLN1 PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.056e-21
Identity = 49/80 (61.25%), Postives = 57/80 (71.25%), Query Frame = 3
Query:   33 LGKRHGEHTAAYGEGNERRLTGRHETADINTFSWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAETTI 272
            L   H E  A YGE NE RLTGRHET  I++FSWGVANRG SIR  R+T  +G GYFEDRRPASN DPY VT  + + ++
Sbjct:  276 LEPHHAECIAEYGEDNELRLTGRHETGSIDSFSWGVANRGTSIRAPRETAAKGYGYFEDRRPASNADPYRVTKALLQFSL 355          
BLAST of EY692075 vs. ExPASy Swiss-Prot
Match: GLNA_MOUSE (Glutamine synthetase OS=Mus musculus GN=Glul PE=1 SV=6)

HSP 1 Score: 97.4413 bits (241), Expect = 4.438e-20
Identity = 51/85 (60.00%), Postives = 58/85 (68.24%), Query Frame = 3
Query:   33 LGKRHGEHTAAY----GEGNERRLTGRHETADINTFSWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAETTIL 275
            L KRH  H  AY    G  N RRLTG HET++IN FS GVANRGASIR+ R   +E KGYFEDRRP++N DPY VT  I  T +L
Sbjct:  277 LSKRHQYHIRAYDPKGGLDNARRLTGFHETSNINDFSAGVANRGASIRIPRTVGQEKKGYFEDRRPSANCDPYAVTEAIVRTCLL 361          
BLAST of EY692075 vs. ExPASy Swiss-Prot
Match: GLNA_SQUAC (Glutamine synthetase, mitochondrial OS=Squalus acanthias PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 5.796e-20
Identity = 49/85 (57.65%), Postives = 58/85 (68.24%), Query Frame = 3
Query:   33 LGKRHGEHTAAY----GEGNERRLTGRHETADINTFSWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAETTIL 275
            LGKRH  H  AY    G  N R LTG HET++IN FS GVANRGASIR+ R   ++ KGYFEDRRP++N DPY VT  +  T +L
Sbjct:  306 LGKRHQYHIRAYDPKGGLDNARALTGHHETSNINEFSAGVANRGASIRIPRSVGQDKKGYFEDRRPSANCDPYAVTEALVRTCLL 390          
BLAST of EY692075 vs. ExPASy Swiss-Prot
Match: GLNA2_CHLRE (Glutamine synthetase, chloroplastic OS=Chlamydomonas reinhardtii GN=GLN2 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 5.796e-20
Identity = 45/80 (56.25%), Postives = 56/80 (70.00%), Query Frame = 3
Query:   33 LGKRHGEHTAAYGEGNERRLTGRHETADINTFSWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAETTI 272
            L K H EH   YG GNE RLTG+HET DINTF  GVA+RG+SIR+      +G GY EDRRPA+N+DPY V  ++ +T +
Sbjct:  299 LSKTHIEHITQYGIGNEARLTGKHETCDINTFKHGVADRGSSIRIPLPVMLKGYGYLEDRRPAANVDPYTVARLLIKTVL 378          
BLAST of EY692075 vs. ExPASy Swiss-Prot
Match: GLNA_ACOCA (Glutamine synthetase OS=Acomys cahirinus GN=GLUL PE=2 SV=3)

HSP 1 Score: 96.2857 bits (238), Expect = 9.886e-20
Identity = 50/85 (58.82%), Postives = 58/85 (68.24%), Query Frame = 3
Query:   33 LGKRHGEHTAAY----GEGNERRLTGRHETADINTFSWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAETTIL 275
            L KRH  H  AY    G  N RRLTG HET++IN FS GVANRGASIR+ R   +E +GYFEDRRP++N DPY VT  I  T +L
Sbjct:  277 LSKRHQYHIRAYDPKGGLDNARRLTGFHETSNINDFSAGVANRGASIRIPRTVGQEKRGYFEDRRPSANCDPYAVTEAIVRTCLL 361          
BLAST of EY692075 vs. ExPASy Swiss-Prot
Match: GLNA2_DROME (Glutamine synthetase 2 cytoplasmic OS=Drosophila melanogaster GN=Gs2 PE=2 SV=3)

HSP 1 Score: 95.9005 bits (237), Expect = 1.291e-19
Identity = 49/85 (57.65%), Postives = 55/85 (64.71%), Query Frame = 3
Query:   33 LGKRHGEHTAAY----GEGNERRLTGRHETADINTFSWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAETTIL 275
            L K H  H  AY    G+ N RRLTG+HET+ IN FS GVANRG SIR+ R    +GKGYFEDRRP+SN DPY V   I  T  L
Sbjct:  283 LSKCHERHIRAYDPKQGQDNARRLTGKHETSSINDFSAGVANRGCSIRIPRGVNDDGKGYFEDRRPSSNCDPYSVVEAILRTICL 367          
BLAST of EY692075 vs. ExPASy Swiss-Prot
Match: GLNA1_DROME (Glutamine synthetase 1, mitochondrial OS=Drosophila melanogaster GN=Gs1 PE=2 SV=3)

HSP 1 Score: 95.5153 bits (236), Expect = 1.686e-19
Identity = 48/85 (56.47%), Postives = 55/85 (64.71%), Query Frame = 3
Query:   33 LGKRHGEHTAAY----GEGNERRLTGRHETADINTFSWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAETTIL 275
            L KRH  H  AY    G+ NERRL GR ET+ I+ FSWGVANR  S+RV R     GKGY EDRRP+SN DPY V + I  T +L
Sbjct:  313 LSKRHERHIKAYDPKEGKDNERRLVGRLETSSIDKFSWGVANRAVSVRVPRGVATAGKGYLEDRRPSSNCDPYAVCNAIVRTCLL 397          
The following BLAST results are available for this feature:
BLAST of EY692075 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
GLNA_XENLA3.630e-2261.18Glutamine synthetase OS=Xenopus laevis GN=glul PE=... [more]
GLNA_SCHPO3.630e-2261.84Glutamine synthetase OS=Schizosaccharomyces pombe ... [more]
GLNA_GIBFU6.192e-2264.94Glutamine synthetase OS=Gibberella fujikuroi GN=GL... [more]
GLNA_FUSSH1.056e-2161.25Glutamine synthetase OS=Fusarium solani subsp. pha... [more]
GLNA_MOUSE4.438e-2060.00Glutamine synthetase OS=Mus musculus GN=Glul PE=1 ... [more]
GLNA_SQUAC5.796e-2057.65Glutamine synthetase, mitochondrial OS=Squalus aca... [more]
GLNA2_CHLRE5.796e-2056.25Glutamine synthetase, chloroplastic OS=Chlamydomon... [more]
GLNA_ACOCA9.886e-2058.82Glutamine synthetase OS=Acomys cahirinus GN=GLUL P... [more]
GLNA2_DROME1.291e-1957.65Glutamine synthetase 2 cytoplasmic OS=Drosophila m... [more]
GLNA1_DROME1.686e-1956.47Glutamine synthetase 1, mitochondrial OS=Drosophil... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-106-D11-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692075 ID=EY692075; Name=EY692075; organism=Citrus sinensis; type=EST; length=540bp
CCGGGGAATTCCCGAGGGTCGACCCACGCGTCCTGGGGAAACGCCATGGG
GAACACACTGCTGCTTATGGAGAGGGCAACGAAAGAAGACTGACAGGTCG
ACATGAAACTGCAGATATCAACACTTTTTCTTGGGGTGTCGCTAACAGAG
GTGCCTCCATTCGCGTTGGTCGTGACACTGAGAAAGAAGGAAAGGGATAC
TTTGAAGACAGAAGGCCAGCTTCAAACATGGACCCATATGTTGTGACTTC
AATGATCGCTGAAACCACCATTCTCTGGAAGCCTTAGAAAACAAACTTGA
GCATGGATGACGAAGAAGAAATCGAGGGAAAATGAAAGCTTAAATTGAAC
CCACCACAAAAATAATTCTTATGTTTTTATAATTTGTCAATGCGTTTAAG
TCTGTTGTTTGAATTTGTTCCTTGCCATTCAAAACTGTACTCTGTTTCTC
TTGTTCCTCATTCTTTGGGATGCTCAGTTGTGATTACTATATTATAGTTT
AAAACTATTTCCCTTCTGTTTAAAAAAAAAAAAAAAAGGG
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