EY692066

Overview
NameEY692066
Unique NameEY692066
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length992
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692066 vs. ExPASy Swiss-Prot
Match: KN1_SOLLC (Homeotic protein knotted-1 OS=Solanum lycopersicum GN=KN1 PE=2 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 1.370e-32
Identity = 84/183 (45.90%), Postives = 100/183 (54.64%), Query Frame = 1
Query:    1 RIETQLTLFSTGPVRIFNSTDDQKCEGVGSSEEDQDNSGGETELPEIDPRAEDRELKNHLLRKYSGYXXXXXXXXXXXXXXXXXXXEARAKSYLTGGNYTINGLILRRQRRWHWLNQLAWI*IGYTTGLSPKGSGIGNLLKICRSW---------LMDGLHPQNAASLYMDGHYMAEWSLPFG 522
            +IE QL +    PVRIFNS D  KCEGVGSSEEDQDNSGGETELPEIDPRAEDRELKNHLLRKYSGY                   +AR K                   +W + ++   + +  +TGL  K      + +  R W         +MDGLHPQ+AA+LYM+GHYM E     G
Sbjct:  184 KIEAQLNMLGNAPVRIFNSED--KCEGVGSSEEDQDNSGGETELPEIDPRAEDRELKNHLLRKYSGYLSSLKQELSKKKKKGKLPKDARQKLITW----------WELHYKWPYPSESEKVALAESTGLDQKQINNWFINQRKRHWKPSEDMQFMVMDGLHPQSAAALYMEGHYMGEGPFRLG 354          
BLAST of EY692066 vs. ExPASy Swiss-Prot
Match: KNOS4_ORYSJ (Homeobox protein knotted-1-like 4 OS=Oryza sativa subsp. japonica GN=OSH10 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 9.003e-30
Identity = 41/67 (61.19%), Postives = 52/67 (77.61%), Query Frame = 3
Query:  219 RTVQEKEERETTQRSQGKKLLNWWELHYKWPYPSETEKVALAESTGLDLNRIYNWFITQRKRHWKPS 419
            R + +K+++    R   +KLL+WW+LHY+WPYPSE EK ALAESTGLD  +I NWFI QRKRHWKP+
Sbjct:  218 RELSKKKKKGKLPRDARQKLLHWWQLHYRWPYPSELEKAALAESTGLDAKQINNWFINQRKRHWKPT 284          

HSP 2 Score: 53.1434 bits (126), Expect = 9.003e-30
Identity = 29/51 (56.86%), Postives = 35/51 (68.63%), Query Frame = 1
Query:   61 DDQKCEGVGSSEEDQDNSGGETE---LPEI-DPRAEDRELKNHLLRKYSGY 201
            DD   EG  SSE++Q+  GG+     LPEI  P AED+ELK+HLL KYSGY
Sbjct:  162 DDNGSEGGNSSEDEQEAGGGDMASAGLPEITSPCAEDKELKSHLLNKYSGY 212          
BLAST of EY692066 vs. ExPASy Swiss-Prot
Match: STM_ARATH (Homeobox protein SHOOT MERISTEMLESS OS=Arabidopsis thaliana GN=STM PE=1 SV=2)

HSP 1 Score: 102.064 bits (253), Expect = 1.637e-28
Identity = 43/70 (61.43%), Postives = 54/70 (77.14%), Query Frame = 3
Query:  231 EKEERETTQRSQGKKLLNWWELHYKWPYPSETEKVALAESTGLDLNRIYNWFITQRKRHWKPSEDMPFMV 440
            +K ++    +   ++LL+WW  HYKWPYPSE +K+ALAESTGLD  +I NWFI QRKRHWKPSEDM F+V
Sbjct:  284 KKRKKGKLPKEARQQLLDWWSRHYKWPYPSEQQKLALAESTGLDQKQINNWFINQRKRHWKPSEDMQFVV 353          

HSP 2 Score: 45.8246 bits (107), Expect = 1.637e-28
Identity = 23/46 (50.00%), Postives = 30/46 (65.22%), Query Frame = 1
Query:   79 GVGSSEEDQDNSGGETELPE-----IDPRAEDRELKNHLLRKYSGY 201
            G G +  D++N+G   E  +     +DP+AEDRELK  LLRKYSGY
Sbjct:  229 GYGETAIDRNNNGSSEEEVDMNNEFVDPQAEDRELKGQLLRKYSGY 274          
BLAST of EY692066 vs. ExPASy Swiss-Prot
Match: STM_BRAOL (Homeobox protein SHOOT MERISTEMLESS OS=Brassica oleracea GN=STM PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 4.703e-28
Identity = 43/70 (61.43%), Postives = 54/70 (77.14%), Query Frame = 3
Query:  231 EKEERETTQRSQGKKLLNWWELHYKWPYPSETEKVALAESTGLDLNRIYNWFITQRKRHWKPSEDMPFMV 440
            +K ++    +   ++LL+WW  HYKWPYPSE +K+ALAESTGLD  +I NWFI QRKRHWKPSEDM F+V
Sbjct:  285 KKRKKGKLPKEARQQLLDWWSRHYKWPYPSEQQKLALAESTGLDQKQINNWFINQRKRHWKPSEDMQFVV 354          

HSP 2 Score: 44.2838 bits (103), Expect = 4.703e-28
Identity = 22/46 (47.83%), Postives = 30/46 (65.22%), Query Frame = 1
Query:   79 GVGSSEEDQDNSGGETELPE-----IDPRAEDRELKNHLLRKYSGY 201
            G G +  +++N+G   E  +     +DP+AEDRELK  LLRKYSGY
Sbjct:  230 GYGEAAIERNNNGSSEEEVDMNNEFVDPQAEDRELKGQLLRKYSGY 275          
BLAST of EY692066 vs. ExPASy Swiss-Prot
Match: HSBH1_SOYBN (Homeobox protein SBH1 OS=Glycine max GN=H1 PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 4.704e-28
Identity = 43/70 (61.43%), Postives = 54/70 (77.14%), Query Frame = 3
Query:  231 EKEERETTQRSQGKKLLNWWELHYKWPYPSETEKVALAESTGLDLNRIYNWFITQRKRHWKPSEDMPFMV 440
            +K ++    +   ++LL WW  HYKWPYPSE++K+ALAESTGLD  +I NWFI QRKRHWKPSEDM F+V
Sbjct:  283 KKRKKGKLPKEARQQLLEWWNRHYKWPYPSESQKLALAESTGLDQKQINNWFINQRKRHWKPSEDMQFVV 352          

HSP 2 Score: 43.8986 bits (102), Expect = 4.704e-28
Identity = 24/39 (61.54%), Postives = 26/39 (66.67%), Query Frame = 1
Query:   85 GSSEEDQDNSGGETELPEIDPRAEDRELKNHLLRKYSGY 201
            GSSEED D          IDP+AEDR+LK  LLRKYSGY
Sbjct:  241 GSSEEDVDLHN------MIDPQAEDRDLKGQLLRKYSGY 273          
BLAST of EY692066 vs. ExPASy Swiss-Prot
Match: KNAP2_MALDO (Homeobox protein knotted-1-like 2 OS=Malus domestica PE=2 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 5.957e-28
Identity = 78/181 (43.09%), Postives = 100/181 (55.25%), Query Frame = 1
Query:    1 RIETQLTLFSTG----PVRIFNSTDDQKCEGVGSSEEDQDNSGGETELPEIDPRAEDRELKNHLLRKYSGYXXXXXXXXXXXXXXXXXXXEARAKSYLTGGNYTINGLILRRQRRWHWLNQLAWI*IGYTTGLSPKGSGIGNLLKICRSW---------LMDGLHPQNAASLYMDGHYMAE 504
            RIETQL +        P+RIF+ ++D KCEG+GSSEE+Q+NSGGETE+PEIDPRAEDRELKNHLLRKYSGY                   +AR K                   +W + ++   + +  +TGL  K      + +  R W         +MDGLHPQNAA LYMDGHY+ +
Sbjct:  222 RIETQLNMLGNNNNAPPLRIFSPSED-KCEGIGSSEEEQENSGGETEVPEIDPRAEDRELKNHLLRKYSGYLSSLKQELSKKKKKGKLPKDARQKLLSW----------WELHYKWPYPSESEKVALAESTGLDQKQINNWFINQRKRHWKPSEDMQFMVMDGLHPQNAA-LYMDGHYIGD 390          
BLAST of EY692066 vs. ExPASy Swiss-Prot
Match: KNAP1_MALDO (Homeobox protein knotted-1-like 1 OS=Malus domestica PE=2 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 1.016e-27
Identity = 78/181 (43.09%), Postives = 99/181 (54.70%), Query Frame = 1
Query:    1 RIETQLTLFSTG----PVRIFNSTDDQKCEGVGSSEEDQDNSGGETELPEIDPRAEDRELKNHLLRKYSGYXXXXXXXXXXXXXXXXXXXEARAKSYLTGGNYTINGLILRRQRRWHWLNQLAWI*IGYTTGLSPKGSGIGNLLKICRSW---------LMDGLHPQNAASLYMDGHYMAE 504
            RIETQL +        P+RIF+ ++D KCEG+GSSE++Q+NSGGETE+PEIDPRAEDRELKNHLLRKYSGY                   EAR K                   +W + ++   + +  +TGL  K      + +  R W         +MDGLHPQNAA LYMDGHY  +
Sbjct:  223 RIETQLNMLGNNNNAPPLRIFSPSED-KCEGIGSSEDEQENSGGETEVPEIDPRAEDRELKNHLLRKYSGYLSSLKQELSKKKKKGKLPKEARQKLLSW----------WELHYKWPYPSESEKVALAESTGLDQKQINNWFINQRKRHWKPSEDMQFMVMDGLHPQNAA-LYMDGHYTGD 391          
BLAST of EY692066 vs. ExPASy Swiss-Prot
Match: LET6_SOLLC (Homeobox protein knotted-1-like LET6 OS=Solanum lycopersicum GN=LET6 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.039e-27
Identity = 41/70 (58.57%), Postives = 54/70 (77.14%), Query Frame = 3
Query:  231 EKEERETTQRSQGKKLLNWWELHYKWPYPSETEKVALAESTGLDLNRIYNWFITQRKRHWKPSEDMPFMV 440
            +K ++    +   ++L++WW  H KWPYPSE++K+ALAESTGLD  +I NWFI QRKRHWKPSEDM F+V
Sbjct:  259 KKRKKGKLPKEARQQLVDWWLRHIKWPYPSESQKLALAESTGLDQKQINNWFINQRKRHWKPSEDMQFVV 328          

HSP 2 Score: 47.7506 bits (112), Expect = 1.039e-27
Identity = 29/67 (43.28%), Postives = 36/67 (53.73%), Query Frame = 1
Query:    1 RIETQLTLFSTGPVRIFNSTDDQKCEGVGSSEEDQDNSGGETELPEIDPRAEDRELKNHLLRKYSGY 201
            RIE Q    +  P     S   +  +  GSS+E+ D +        IDP+AEDRELK  LLRKYSGY
Sbjct:  188 RIECQFKALTLAPNSSHESALGEAMDRNGSSDEEVDVNNSF-----IDPQAEDRELKGQLLRKYSGY 249          
BLAST of EY692066 vs. ExPASy Swiss-Prot
Match: KNOS9_ORYSJ (Homeobox protein knotted-1-like 9 OS=Oryza sativa subsp. japonica GN=Os03g0772100 PE=2 SV=2)

HSP 1 Score: 88.1965 bits (217), Expect = 2.638e-25
Identity = 37/50 (74.00%), Postives = 43/50 (86.00%), Query Frame = 3
Query:  273 KLLNWWELHY-KWPYPSETEKVALAESTGLDLNRIYNWFITQRKRHWKPS 419
            KLL+WWELHY KWPYPSE EK+ LA++TGLD  +I NWFI QRKRHWKP+
Sbjct:  244 KLLHWWELHYDKWPYPSEVEKMTLAQTTGLDQKQISNWFINQRKRHWKPT 293          

HSP 2 Score: 48.9062 bits (115), Expect = 2.638e-25
Identity = 27/49 (55.10%), Postives = 32/49 (65.31%), Query Frame = 1
Query:   52 NSTDDQKCEGVGSSEEDQDNSGGETELPEIDPRAEDRELKNHLLRKYSG 198
            +S  D  CEG GSSEE+QD S  E E  EIDP   D++LK+ LL KY G
Sbjct:  175 DSIADSNCEGTGSSEEEQDTSCPEAE--EIDP--SDKQLKHQLLMKYGG 219          
BLAST of EY692066 vs. ExPASy Swiss-Prot
Match: KNAT6_ARATH (Homeobox protein knotted-1-like 6 OS=Arabidopsis thaliana GN=KNAT6 PE=1 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 4.474e-25
Identity = 41/68 (60.29%), Postives = 54/68 (79.41%), Query Frame = 3
Query:  231 EKEERETTQRSQGKKLLNWWELHYKWPYPSETEKVALAESTGLDLNRIYNWFITQRKRHWKPSEDMPF 434
            +K+++    R   + LL+WW LHYKWPYP+E +K+ALA++TGLD  +I NWFI QRKRHWKPSE+MPF
Sbjct:  246 KKKKKGKLPREARQALLDWWNLHYKWPYPTEGDKIALADATGLDQKQINNWFINQRKRHWKPSENMPF 313          

HSP 2 Score: 35.039 bits (79), Expect = 4.474e-25
Identity = 27/65 (41.54%), Postives = 37/65 (56.92%), Query Frame = 1
Query:    1 RIETQLTLFSTGPVRIFNSTDDQKCEGVGSSEEDQDNSGGETELPEID-PRAEDRELKNHLLRKY 192
            +IE QL    TG       ++D    GV SS+E+   SGG+ E+ E    R EDR+LK+ LLRK+
Sbjct:  175 KIEMQLRNLCTGVESARGVSED----GVISSDEEL--SGGDHEVAEDGRQRCEDRDLKDRLLRKF 233          
The following BLAST results are available for this feature:
BLAST of EY692066 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 36
Match NameE-valueIdentityDescription
KN1_SOLLC1.370e-3245.90Homeotic protein knotted-1 OS=Solanum lycopersicum... [more]
KNOS4_ORYSJ9.003e-3061.19Homeobox protein knotted-1-like 4 OS=Oryza sativa ... [more]
STM_ARATH1.637e-2861.43Homeobox protein SHOOT MERISTEMLESS OS=Arabidopsis... [more]
STM_BRAOL4.703e-2861.43Homeobox protein SHOOT MERISTEMLESS OS=Brassica ol... [more]
HSBH1_SOYBN4.704e-2861.43Homeobox protein SBH1 OS=Glycine max GN=H1 PE=2 SV... [more]
KNAP2_MALDO5.957e-2843.09Homeobox protein knotted-1-like 2 OS=Malus domesti... [more]
KNAP1_MALDO1.016e-2743.09Homeobox protein knotted-1-like 1 OS=Malus domesti... [more]
LET6_SOLLC1.039e-2758.57Homeobox protein knotted-1-like LET6 OS=Solanum ly... [more]
KNOS9_ORYSJ2.638e-2574.00Homeobox protein knotted-1-like 9 OS=Oryza sativa ... [more]
KNAT6_ARATH4.474e-2560.29Homeobox protein knotted-1-like 6 OS=Arabidopsis t... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-106-D01-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692066 ID=EY692066; Name=EY692066; organism=Citrus sinensis; type=EST; length=992bp
CGGATCGAAACTCAGCTTACTCTGTTTAGCACTGGCCCCGTTCGGATCTT
CAACTCCACTGATGATCAGAAATGTGAAGGCGTTGGCTCCTCCGAAGAAG
ATCAAGATAATAGTGGTGGGGAGACAGAGTTACCTGAAATTGATCCCCGG
GCTGAAGATCGAGAACTGAAGAACCACCTATTGAGGAAATACAGTGGCTA
CTTAAGTAGCCTCAAACAAGAACTGTCCAAGAAAAAGAAGAAAGGGAAAC
TACCCAAAGAAGCCAGGGCAAAAAGCTACTTAACTGGTGGGAATTACACT
ATAAATGGCCTTATCCTTCGGAGACAGAGAAGGTGGCATTGGCTGAATCA
ACTGGCTTGGATCTGAATCGGATATACAACTGGTTTATCACCCAAAGGAA
GCGGCATTGGAAACCTTCTGAAGATATGCCGTTCATGGTTGATGGATGGC
CTTCATCCTCAAAATGCTGCTTCTCTTTATATGGATGGACACTACATGGC
TGAATGGTCCCTACCGTTTGGGACCATGATCTAGGCCAGCTTCAATGCCA
AATTTTATGGGAGAGAAAAAGGAGGGGAAATGGGTGGTGGTTTGGTAAGG
GATAAGGTAATCAAAGTGTTTAGGCTTAATGCAGCGATATGAATATTTTT
TAAGTGGCGTGAAAAATTTGGGGAATTATCCCTGCCAGTAAAACTTTATT
AATTTAAGAATTACAATGGCCTTTTTCGTTATGGGTTTTGATTGAAATAA
ATAGATAGAACCTACGGAAAGATGTAGATTTGCTGCACCAGTCTGCAATT
GAAAAATAATGAGGGGGGGGGGCCTGTCCTTATGCAATAACACTCAACAC
TTTATACTACAAGCCGGGGAACCGTGCCATCACACATGACCATAGGCCCT
CTTTTTGAAACGGGGAGCCACATACTTAGAAGATTAAACATGCTTATTCC
CGCGGGGGGGGACCGCGTCCCTACGAATGAAAAATAGGAGAA
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