EY692066

Overview
NameEY692066
Unique NameEY692066
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length992
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692066 vs. ExPASy Swiss-Prot
Match: HLG3_MAIZE (Homeobox protein liguleless 3 (Fragment) OS=Zea mays GN=LG3 PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.876e-15
Identity = 33/48 (68.75%), Postives = 37/48 (77.08%), Query Frame = 3
Query:  276 LLNWWELHYKWPYPSETEKVALAESTGLDLNRIYNWFITQRKRHWKPS 419
            LL WW  HY+WPYP+E +KV LA  TGLD  +I NWFI QRKRHWKPS
Sbjct:   38 LLEWWNTHYRWPYPTEEDKVRLAAMTGLDPKQINNWFINQRKRHWKPS 85          

HSP 2 Score: 21.557 bits (44), Expect = 1.876e-15
Identity = 9/12 (75.00%), Postives = 10/12 (83.33%), Query Frame = 1
Query:  163 ELKNHLLRKYSG 198
            ELK  LL+KYSG
Sbjct:    1 ELKEMLLKKYSG 12          
BLAST of EY692066 vs. ExPASy Swiss-Prot
Match: KNAT7_ARATH (Homeobox protein knotted-1-like 7 OS=Arabidopsis thaliana GN=KNAT7 PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 4.582e-12
Identity = 35/83 (42.17%), Postives = 47/83 (56.63%), Query Frame = 3
Query:  183 EEIQWLLK*PQTRTVQEKEERETTQRSQGKK-------LLNWWELHYKWPYPSETEKVALAESTGLDLNRIYNWFITQRKRHW 410
            +E++  LK      +++  E    +R  GK        L NWW+ H KWPYP+E +K  L E TGL L +I NWFI QRKR+W
Sbjct:  193 QELKLELKQGFKSRIEDVREEIMRKRRAGKLPGDTTTVLKNWWQQHCKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNW 275          
BLAST of EY692066 vs. ExPASy Swiss-Prot
Match: HD1_BRANA (Homeobox protein HD1 OS=Brassica napus GN=HD1 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 4.582e-12
Identity = 35/83 (42.17%), Postives = 47/83 (56.63%), Query Frame = 3
Query:  183 EEIQWLLK*PQTRTVQEKEERETTQRSQGKK-------LLNWWELHYKWPYPSETEKVALAESTGLDLNRIYNWFITQRKRHW 410
            +E++  LK      +++  E    +R  GK        L NWW+ H KWPYP+E +K  L E TGL L +I NWFI QRKR+W
Sbjct:  196 QELKLELKQGFKSRIEDVREEIMRKRRAGKLPGDTTTVLKNWWQQHCKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNW 278          
BLAST of EY692066 vs. ExPASy Swiss-Prot
Match: KNOX1_MAIZE (Homeobox protein knotted-1-like 1 (Fragment) OS=Zea mays GN=KNOX1 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.970e-11
Identity = 34/83 (40.96%), Postives = 46/83 (55.42%), Query Frame = 3
Query:  183 EEIQWLLK*PQTRTVQEKEERETTQRSQGKK-------LLNWWELHYKWPYPSETEKVALAESTGLDLNRIYNWFITQRKRHW 410
            +E++  LK      +++  E    +R  GK        L  WW+ H KWPYP+E +K  L E TGL L +I NWFI QRKR+W
Sbjct:    3 QELKLELKQGFKSRIEDVREEILRKRRAGKLPGDTTSILKQWWQEHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNW 85          
BLAST of EY692066 vs. ExPASy Swiss-Prot
Match: KNOS3_ORYSJ (Homeobox protein knotted-1-like 3 OS=Oryza sativa subsp. japonica GN=HOS66 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.970e-11
Identity = 34/83 (40.96%), Postives = 46/83 (55.42%), Query Frame = 3
Query:  183 EEIQWLLK*PQTRTVQEKEERETTQRSQGKK-------LLNWWELHYKWPYPSETEKVALAESTGLDLNRIYNWFITQRKRHW 410
            +E++  LK      +++  E    +R  GK        L  WW+ H KWPYP+E +K  L E TGL L +I NWFI QRKR+W
Sbjct:  217 QELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTTILKQWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNW 299          
BLAST of EY692066 vs. ExPASy Swiss-Prot
Match: KNAT4_ARATH (Homeobox protein knotted-1-like 4 OS=Arabidopsis thaliana GN=KNAT4 PE=1 SV=3)

HSP 1 Score: 68.5514 bits (166), Expect = 6.617e-11
Identity = 26/45 (57.78%), Postives = 33/45 (73.33%), Query Frame = 3
Query:  276 LLNWWELHYKWPYPSETEKVALAESTGLDLNRIYNWFITQRKRHW 410
            L +WW+ H KWPYP+E +K  L + TGL L +I NWFI QRKR+W
Sbjct:  323 LKSWWQSHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNW 367          
The following BLAST results are available for this feature:
BLAST of EY692066 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 36
Match NameE-valueIdentityDescription
HLG3_MAIZE1.876e-1568.75Homeobox protein liguleless 3 (Fragment) OS=Zea ma... [more]
KNAT7_ARATH4.582e-1242.17Homeobox protein knotted-1-like 7 OS=Arabidopsis t... [more]
HD1_BRANA4.582e-1242.17Homeobox protein HD1 OS=Brassica napus GN=HD1 PE=2... [more]
KNOX1_MAIZE2.970e-1140.96Homeobox protein knotted-1-like 1 (Fragment) OS=Ze... [more]
KNOS3_ORYSJ2.970e-1140.96Homeobox protein knotted-1-like 3 OS=Oryza sativa ... [more]
KNAT4_ARATH6.617e-1157.78Homeobox protein knotted-1-like 4 OS=Arabidopsis t... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-106-D01-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692066 ID=EY692066; Name=EY692066; organism=Citrus sinensis; type=EST; length=992bp
CGGATCGAAACTCAGCTTACTCTGTTTAGCACTGGCCCCGTTCGGATCTT
CAACTCCACTGATGATCAGAAATGTGAAGGCGTTGGCTCCTCCGAAGAAG
ATCAAGATAATAGTGGTGGGGAGACAGAGTTACCTGAAATTGATCCCCGG
GCTGAAGATCGAGAACTGAAGAACCACCTATTGAGGAAATACAGTGGCTA
CTTAAGTAGCCTCAAACAAGAACTGTCCAAGAAAAAGAAGAAAGGGAAAC
TACCCAAAGAAGCCAGGGCAAAAAGCTACTTAACTGGTGGGAATTACACT
ATAAATGGCCTTATCCTTCGGAGACAGAGAAGGTGGCATTGGCTGAATCA
ACTGGCTTGGATCTGAATCGGATATACAACTGGTTTATCACCCAAAGGAA
GCGGCATTGGAAACCTTCTGAAGATATGCCGTTCATGGTTGATGGATGGC
CTTCATCCTCAAAATGCTGCTTCTCTTTATATGGATGGACACTACATGGC
TGAATGGTCCCTACCGTTTGGGACCATGATCTAGGCCAGCTTCAATGCCA
AATTTTATGGGAGAGAAAAAGGAGGGGAAATGGGTGGTGGTTTGGTAAGG
GATAAGGTAATCAAAGTGTTTAGGCTTAATGCAGCGATATGAATATTTTT
TAAGTGGCGTGAAAAATTTGGGGAATTATCCCTGCCAGTAAAACTTTATT
AATTTAAGAATTACAATGGCCTTTTTCGTTATGGGTTTTGATTGAAATAA
ATAGATAGAACCTACGGAAAGATGTAGATTTGCTGCACCAGTCTGCAATT
GAAAAATAATGAGGGGGGGGGGCCTGTCCTTATGCAATAACACTCAACAC
TTTATACTACAAGCCGGGGAACCGTGCCATCACACATGACCATAGGCCCT
CTTTTTGAAACGGGGAGCCACATACTTAGAAGATTAAACATGCTTATTCC
CGCGGGGGGGGACCGCGTCCCTACGAATGAAAAATAGGAGAA
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