EY688816

Overview
NameEY688816
Unique NameEY688816
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length818
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY688816 vs. ExPASy Swiss-Prot
Match: GLGA_SYNSC (Glycogen synthase OS=Synechococcus sp. (strain CC9605) GN=glgA PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.693e-17
Identity = 62/170 (36.47%), Postives = 86/170 (50.59%), Query Frame = 3
Query:   33 MEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGS-FSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAG-SEPGIDGE*IAPLAKENVATP 536
            +E  L QL   +P K      ++  L+ +I  G+D  L+PSRFEPCG+ QL+AMRYG+VP+V   GGLVDTV         G+ F  D    +PVD    +  VR   A     +  E+ K GM QD SW   A  ++  L+  +V G  EP  D   +   ++   A P
Sbjct:  315 LESGLWQLASRHPGKCAVFLTYDDDLSRLIYGGSDAFLMPSRFEPCGISQLYAMRYGSVPVVRKVGGLVDTVPPHIPAADSGTGFCFD--RFEPVDF--YTALVRAWEAFRHRDSWTELQKRGMNQDYSWDRSAVDYD--LMYKDVCGIKEPTPDAALVEQFSQGQAADP 478          
BLAST of EY688816 vs. ExPASy Swiss-Prot
Match: GLGA_RHOPT (Glycogen synthase OS=Rhodopseudomonas palustris (strain TIE-1) GN=glgA PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.693e-17
Identity = 54/135 (40.00%), Postives = 74/135 (54.81%), Query Frame = 3
Query:   66 YPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVD--PVDVAAVSTTVRRALATYG-TQALAEMMKNGMAQDLSWKGPAKKWEETLLNL 461
            YP +   V  ++  LAH I AGAD +L+PSRFEPCGL QL A+RYG VP+VA  GGL DTV +     +M + +     V   PV   A+     +  A +    A   +  NGM  D+SWK PA+ + +   +L
Sbjct:  348 YPGQVGAVIGYDEALAHQIQAGADALLVPSRFEPCGLTQLCALRYGAVPVVARVGGLADTVVD---ANEMATATGVATGVQFAPVTTDALIKAFGKTRALFADVVAWRNLQINGMTTDVSWKNPAQHYAKLYRDL 479          
BLAST of EY688816 vs. ExPASy Swiss-Prot
Match: GLGA_RHOPA (Glycogen synthase OS=Rhodopseudomonas palustris GN=glgA PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.693e-17
Identity = 54/135 (40.00%), Postives = 74/135 (54.81%), Query Frame = 3
Query:   66 YPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVD--PVDVAAVSTTVRRALATYG-TQALAEMMKNGMAQDLSWKGPAKKWEETLLNL 461
            YP +   V  ++  LAH I AGAD +L+PSRFEPCGL QL A+RYG VP+VA  GGL DTV +     +M + +     V   PV   A+     +  A +    A   +  NGM  D+SWK PA+ + +   +L
Sbjct:  348 YPGQVGAVIGYDEALAHQIQAGADALLVPSRFEPCGLTQLCALRYGAVPVVARVGGLADTVVD---ANEMATATGVATGVQFAPVTTDALIKAFGKTRALFADVVAWRNLQINGMTTDVSWKNPAQHYAKLYRDL 479          
BLAST of EY688816 vs. ExPASy Swiss-Prot
Match: GLGA_BACCR (Glycogen synthase OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=glgA PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.693e-17
Identity = 57/145 (39.31%), Postives = 79/145 (54.48%), Query Frame = 3
Query:   36 EKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVE--EGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAE-MMKNGMAQDLSWKGPAKKWEETLLNL 461
            E+  E +   YPEK +    FN  LAH + AG+D  L+PS FEPCGL QL A+ YGT+PIV  TGGL DTV   +  TG   G    +  A D +       T+ RA+  Y  + + E ++K  M +D SW+  A  ++E   +L
Sbjct:  336 EQFFEWMAYEYPEKVKVYIGFNEELAHQVYAGSDLFLMPSLFEPCGLGQLIALAYGTIPIVRETGGLNDTVHSYDEETGEGNGFSFTNFNAHDMLH------TIHRAIEFYHDKPVWEQLVKQAMTEDYSWEQSALAYKELYKSL 474          
BLAST of EY688816 vs. ExPASy Swiss-Prot
Match: GLGA_BACC4 (Glycogen synthase OS=Bacillus cereus (strain B4264) GN=glgA PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.693e-17
Identity = 57/145 (39.31%), Postives = 79/145 (54.48%), Query Frame = 3
Query:   36 EKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVE--EGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAE-MMKNGMAQDLSWKGPAKKWEETLLNL 461
            E+  E +   YPEK +    FN  LAH + AG+D  L+PS FEPCGL QL A+ YGT+PIV  TGGL DTV   +  TG   G    +  A D +       T+ RA+  Y  + + E ++K  M +D SW+  A  ++E   +L
Sbjct:  336 EQFFEWMAYEYPEKVKVYIGFNEELAHQVYAGSDLFLMPSLFEPCGLGQLIALAYGTIPIVRETGGLNDTVHSYDEETGEGNGFSFTNFNAHDMLH------TIHRAIEFYHDKPVWEQLVKQAMTEDYSWEQSALAYKELYKSL 474          
BLAST of EY688816 vs. ExPASy Swiss-Prot
Match: GLGA_ANADF (Glycogen synthase OS=Anaeromyxobacter sp. (strain Fw109-5) GN=glgA PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.693e-17
Identity = 54/126 (42.86%), Postives = 74/126 (58.73%), Query Frame = 3
Query:   69 PEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY-GTQALAEMMKNGMAQDLSWKGPAKKWE 443
            P++      F+  LAH + AGAD  L+PSRFEPCGL Q++++RYGT+P+V + GGL DTVE+ F G+  G+         P    A+   VRRAL  +   +A   MM  GMA D SW   A+ +E
Sbjct:  346 PDRMAARIGFDEGLAHRMEAGADLFLMPSRFEPCGLNQMYSLRYGTIPVVRAVGGLEDTVED-FDGWSRGT-GFKFRDYHP---QAMLLAVRRALEAHRDRRAWRAMMLRGMALDFSWDRSAQAYE 466          
BLAST of EY688816 vs. ExPASy Swiss-Prot
Match: GLGA_KOSOT (Glycogen synthase OS=Kosmotoga olearia (strain TBF 19.5.1) GN=glgA PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 3.517e-17
Identity = 51/136 (37.50%), Postives = 75/136 (55.15%), Query Frame = 3
Query:   36 EKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQAL-AEMMKNGMAQDLSWKGPAKKW 440
            E+  + L   +PEK      FN+ LA  I AG+D  L+PSR+EPCGL Q+ AMRYGT+P+V  TGGL DTV+E    F   +   +    +  +   +   V +A+  Y  + L  ++M N M  D SW   A+++
Sbjct:  327 ERLFKSLGERFPEKVSANITFNVDLAQKIYAGSDMFLMPSRYEPCGLGQMFAMRYGTIPVVRFTGGLRDTVKE----FNPETLEGNGFGFEEYNPDKLLEAVEKAIKIYENKTLWNQLMLNAMNTDCSWDKSAREY 458          
BLAST of EY688816 vs. ExPASy Swiss-Prot
Match: GLGA_BACAN (Glycogen synthase OS=Bacillus anthracis GN=glgA PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 3.517e-17
Identity = 57/145 (39.31%), Postives = 81/145 (55.86%), Query Frame = 3
Query:   36 EKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVE--EGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAE-MMKNGMAQDLSWKGPAKKWEETLLNL 461
            E+  E +   YPEK +    FN  LAH + AG+D  L+PS FEPCGL QL A+ YGT+PIV  TGGL DTV+  +  TG   G    +  A D +       TV RA+  Y  +++ E ++K  M +D SW+  A  +++   +L
Sbjct:  336 EQFFEWMAYEYPEKVKVYIGFNEELAHQVYAGSDLFLMPSLFEPCGLGQLIALAYGTIPIVRETGGLNDTVQSYDEETGEGNGFSFTNFNAHDMLH------TVLRAIEFYHDKSVWEQLVKQAMTEDYSWEKSALAYKKLYKSL 474          
BLAST of EY688816 vs. ExPASy Swiss-Prot
Match: GLGA_THIDA (Glycogen synthase OS=Thiobacillus denitrificans (strain ATCC 25259) GN=glgA PE=3 SV=2)

HSP 1 Score: 88.5817 bits (218), Expect = 4.593e-17
Identity = 53/133 (39.85%), Postives = 74/133 (55.64%), Query Frame = 3
Query:   36 EKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQAL-AEMMKNGMAQDLSWKGPA 431
            E++L +L   +P +      ++  LAH I AGAD  L+PSRFEPCGL Q++++RYGT+PIV  TGGL DT+ +      +   S +    D  DVA     VRRALA Y   +L   + + GM     W+  A
Sbjct:  345 EQRLTRLARQHPTRVFVEIGYDEALAHQIEAGADMFLMPSRFEPCGLNQMYSLRYGTLPIVFKTGGLADTIVD-TNEASLADGSANGFVFDTPDVAHFVDAVRRALALYRQPSLWRRVQQTGMRLSFDWRESA 476          
BLAST of EY688816 vs. ExPASy Swiss-Prot
Match: GLGA_LACLA (Glycogen synthase OS=Lactococcus lactis subsp. lactis GN=glgA PE=3 SV=2)

HSP 1 Score: 88.5817 bits (218), Expect = 4.593e-17
Identity = 59/136 (43.38%), Postives = 77/136 (56.62%), Query Frame = 3
Query:   66 YPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV-------EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYG--TQALAEMMKNGMAQDLSWKGPAKKWEE 446
            YP+K      F+I  A  I AG+DF L+PS FEPCGL Q+ AMRYGT+PIV   GGL DTV       +EG TGF      VD E    V+      T+ RAL  YG   + L +M+ + M++D SW   A+++ E
Sbjct:  349 YPDKLSANIAFDIQFAQEIYAGSDFFLMPSAFEPCGLSQMIAMRYGTLPIVHEIGGLKDTVIPFNPISKEG-TGFGF----VDFEGQILVE------TINRALEVYGKEPEVLNKMVLSAMSKDFSWGTKAQQYIE 473          
The following BLAST results are available for this feature:
BLAST of EY688816 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 357
Match NameE-valueIdentityDescription
GLGA_SYNSC2.693e-1736.47Glycogen synthase OS=Synechococcus sp. (strain CC9... [more]
GLGA_RHOPT2.693e-1740.00Glycogen synthase OS=Rhodopseudomonas palustris (s... [more]
GLGA_RHOPA2.693e-1740.00Glycogen synthase OS=Rhodopseudomonas palustris GN... [more]
GLGA_BACCR2.693e-1739.31Glycogen synthase OS=Bacillus cereus (strain ATCC ... [more]
GLGA_BACC42.693e-1739.31Glycogen synthase OS=Bacillus cereus (strain B4264... [more]
GLGA_ANADF2.693e-1742.86Glycogen synthase OS=Anaeromyxobacter sp. (strain ... [more]
GLGA_KOSOT3.517e-1737.50Glycogen synthase OS=Kosmotoga olearia (strain TBF... [more]
GLGA_BACAN3.517e-1739.31Glycogen synthase OS=Bacillus anthracis GN=glgA PE... [more]
GLGA_THIDA4.593e-1739.85Glycogen synthase OS=Thiobacillus denitrificans (s... [more]
GLGA_LACLA4.593e-1743.38Glycogen synthase OS=Lactococcus lactis subsp. lac... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-065-A07-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY688816 ID=EY688816; Name=EY688816; organism=Citrus sinensis; type=EST; length=818bp
CAGATAATAGTCCTTGGTACCGGTATAAACCAATGGAGAAGCAGCTTGAA
CAGTTGGAGATACTGTACCCTGAGAAAGCCAGAGGAGTAGCGAAATTCAA
TATTCCTCTGGCGCATATGATAATAGCAGGAGCTGATTTTATTTTGATTC
CAAGCAGATTTGAACCTTGTGGTCTCATTCAATTACATGCCATGCGTTAT
GGAACCGTACCTATCGTGGCTTCCACTGGTGGTTTGGTTGACACTGTGGA
AGAAGGCTTTACAGGATTCCAGATGGGAAGCTTCAGTGTTGACTGTGAGG
CTGTGGATCCAGTAGATGTGGCTGCAGTGTCCACAACCGTCAGAAGAGCT
CTTGCAACCTATGGTACTCAAGCTTTGGCTGAAATGATGAAAAATGGCAT
GGCTCAAGATCTTTCATGGAAAGGACCAGCTAAGAAATGGGAGGAGACCC
TACTTAACCTGGAAGTTGCTGGTAGTGAACCTGGAATTGACGGCGAATAA
ATTGCTCCTCTTGCCAAGGAAAATGTGGCCACTCCTTGATCGAGGCTACA
AAAATCTCCACTTTTATTTTGGACCCCCAACATGTTCCTGTAATTCTCCA
CAACCCGAGATATTACTTAGGAAATAACCTAGGGTGGCAGTATATGCAGC
CTGGGGCTAATTTTCCATAATGGTTGGGAGGTGAAACATTTATGGTTTAC
CTTGGAATATGAAATATTAAGATTCGGGTTTAAGGTTTTTGGAAAAGGGG
TCTGGGGGGTGGACCCCCTTCTCCTGGAATGGAGACGGCTCACTTGAACC
CGTTTCTGCGCGGCGGGC
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