EY711589

Overview
NameEY711589
Unique NameEY711589
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length916
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY711589 vs. ExPASy Swiss-Prot
Match: GATA_ARCFU (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Archaeoglobus fulgidus GN=gatA PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.346e-23
Identity = 62/180 (34.44%), Postives = 96/180 (53.33%), Query Frame = 3
Query:   24 QATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVXMVGILAATVEDALVVYAAING 563
            +A +   +Y +GE    L G+ +AVKD I      TT  +K L   RP   DA  V +L+  GAI++GK NM E   GT+    ++GV RNP+D +++                  ++LG D GGS+R PA+ CGV G KPT+G +   G++P   ++  +G +A ++ED  ++   I G
Sbjct:   41 EALKMAEKYDRGELKGRLAGIPVAVKDNISTKGILTTCASKMLSNYRPVF-DAHVVEKLKQEGAIIIGKANMDEFAMGTTTETSYFGVVRNPHDEARVAGGSSGGSGAVIAADEAVLSLGSDTGGSIRCPASFCGVYGLKPTYGLVSRYGLIPYANSLEQIGPMADSIEDLALLLEVIAG 219          
BLAST of EY711589 vs. ExPASy Swiss-Prot
Match: Y1954_ARCFU (Putative amidase AF_1954 OS=Archaeoglobus fulgidus GN=AF_1954 PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.758e-23
Identity = 63/171 (36.84%), Postives = 90/171 (52.63%), Query Frame = 3
Query:   51 KKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVXMVGILAATVEDALVVYAAING 563
            KK +  + L G+ IA+KD ++     TT  +K+     P   DA  V RL+  GA+++GKTNM E G      NP +G  RNP+D S+                + PVA G DGGGS+R+PA+ CG+ G KP+FGR+P    LP+   +   G L   VED  ++   + G
Sbjct:   51 KKADVSTPLAGLPIAIKDNVETRGIRTTYCSKFYENYVP-EEDAVLVERLKKAGAVIIGKTNMPEFGLIAYTDNPMFGPTRNPWDLSRTVGGSSGGSAAAVAAGILPVASGNDGGGSIRIPASFCGLYGLKPSFGRVPCYPSLPIFIGLHSEGFLTRYVEDTALMLDLVKG 220          
BLAST of EY711589 vs. ExPASy Swiss-Prot
Match: GATA_PROVI (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Prosthecochloris vibrioformis (strain DSM 265) (strain DSM 265) GN=gatA PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.758e-23
Identity = 67/189 (35.45%), Postives = 96/189 (50.79%), Query Frame = 3
Query:    6 RPDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVXMVGILAATVEDALVVYAAINGPLP 572
            R + +++A     + ++G     L G+ +A+KD I     P T  +K L   R    DA  + RL    AI +GKTNM E   G+S  N  +G  +NP+DPS++               LC VALG D GGSVR PA  C VVG KPT+GRI   G++    +   +G+L+ +  DA +V   + G  P
Sbjct:   45 RDEAIERAAALDRKLREGGEPGRLFGLPMAIKDNISMDGAPLTCASKMLEGYRSVY-DATVIRRLFDEDAIFLGKTNMDEFAMGSSNENSAFGPVQNPFDPSRVPGGSSGGSAAAVAAGLCMVALGSDTGGSVRQPAGFCDVVGLKPTYGRISRYGLVAFASSFDQIGVLSHSSMDAALVLGVMAGSDP 232          
BLAST of EY711589 vs. ExPASy Swiss-Prot
Match: GATA_SALAI (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Salinispora arenicola (strain CNS-205) GN=gatA PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 2.296e-23
Identity = 66/177 (37.29%), Postives = 93/177 (52.54%), Query Frame = 3
Query:   45 RYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVXMVGILAATVEDALVVYAAINGPLPS 575
            R   GEP+  L GV +AVKD +     PTT G++ L   RP   D+  V RLR  G +++GKTNM E   G+S     +G   NP+D S+I                 P+++G D GGS+R P A+ G VG KPT+G     G++  + ++   G  A TV DA +++ AI G  PS
Sbjct:   62 RRAAGEPLGPLAGVPVAVKDVLTTKGIPTTAGSRILAGWRP-PYDSTIVRRLRAAGTVMLGKTNMDEFAMGSSTEYSAFGPTHNPWDLSRIPGGSGGGSAAALAAYETPLSIGSDTGGSIRQPGAVTGTVGVKPTYGGTSRYGLVAFSSSLDTPGPCARTVLDAALLHEAIGGHDPS 237          
BLAST of EY711589 vs. ExPASy Swiss-Prot
Match: GATA_HALSA (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Halobacterium salinarium GN=gatA PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 2.296e-23
Identity = 68/179 (37.99%), Postives = 92/179 (51.40%), Query Frame = 3
Query:   30 TESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVXMVGILAATVEDALVVYAAINGP 566
            TE+T++     P   LDG  +AVKD I     PTT G+K L    P   +A  V  L   G  +VGKTNM E G GT+    ++G  +NP D +++                  +ALG D GGSVR PAA CGVVG KPT+G +   G++    ++  +G +A TVE A  +   I GP
Sbjct:    8 TETTIQGAADGP---LDGTTVAVKDNISTKGVPTTCGSKMLADYEP-PYNATVVEDLLAAGGTIVGKTNMDEFGMGTTTETSYFGPTKNPVDETRVPGGSSGGSAAAVANGDADLALGSDTGGSVRAPAAYCGVVGLKPTYGLVSRYGLVAYANSLEQIGPIAPTVEGAAELLDVIAGP 182          
BLAST of EY711589 vs. ExPASy Swiss-Prot
Match: GATA_DESDA (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Desulfovibrio desulfuricans (strain ATCC 27774 / DSM 6949) GN=gatA PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 2.296e-23
Identity = 67/188 (35.64%), Postives = 95/188 (50.53%), Query Frame = 3
Query:   27 ATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVXMVGILAATVEDALVVYAAINGPLPSQQPTC 590
            A  +TL  +  +    L GV + +KD       PTT G++ L    P   DA  V +L   GA+++GKTN+ E   G+S  N  + V RNP++ +K+                C  +LG D GGS+R PA+ CG VG KPT+GR+   GV+    ++  VG L  +VED   V  AI G   S+  TC
Sbjct:   54 ARATTLDSEGPDAARPLWGVPVTLKDAFSTRGMPTTAGSRMLEGYTPFY-DAFAVQKLHEAGAVILGKTNLDEFAMGSSTENSAFKVTRNPWNLNKVPGGSSGGSAASVTAGQCFASLGTDTGGSIRQPASFCGCVGLKPTYGRVSRYGVIAYGSSLDQVGPLTRSVEDCARVLTAIAG-YDSRDNTC 239          
BLAST of EY711589 vs. ExPASy Swiss-Prot
Match: GATA_CARHZ (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=gatA PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.998e-23
Identity = 69/198 (34.85%), Postives = 97/198 (48.99%), Query Frame = 3
Query:    3 TRPDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVXMVGILAATVEDALVVYAAINGPLPSQQPTCFI 596
            TR   LK A E   +  +GE    L GV +A+KD +  +   TT  +K L    P   DA  V +L+  GA+  GKTN+ E   G+S  N  +   RNP+D  ++                  VALG D GGS+R PAA CG+VG KPT+G +   G++    ++  +G  A TVEDA ++   I G  P    +  I
Sbjct:   47 TRELGLKMAREVDEKIARGEDPGPLAGVPVAIKDNMSTAGIRTTCSSKILENYIP-PYDATVVEKLKEAGAVFTGKTNLDEFAMGSSTENSRFFPTRNPWDLERVPGGSSGGSAASVAAGEAVVALGSDTGGSIRQPAAFCGIVGLKPTYGAVSRYGLVAFASSLDQIGPFARTVEDAALLLNVIAGHDPKDSTSADI 243          
BLAST of EY711589 vs. ExPASy Swiss-Prot
Match: GATA_ANAVT (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=gatA PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.998e-23
Identity = 65/187 (34.76%), Postives = 94/187 (50.27%), Query Frame = 3
Query:    3 TRPDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVXMVGILAATVEDALVVYAAING 563
            T    L+QA     +   GE I +L G+ I VKD +     PTT  ++ L    P   ++    +L   GA++VGKTN+ E   G+S  N  Y V  NP+D S++                C VALG D GGS+R PA+ CGVVG KPT+G +   G++    ++  +G    +VED  ++  AI G
Sbjct:   43 TAQQALEQARAVDAKIAAGEEIGLLAGIPIGVKDNMCTKGIPTTCASRILENFVP-PYESTVTQKLLDAGAVVVGKTNLDEFAMGSSTENSAYQVTANPWDLSRVPGGSSGGSAAAVAAEECVVALGSDTGGSIRQPASFCGVVGLKPTYGLVSRYGLVAYASSLDQIGPFGKSVEDTAILLKAIAG 228          
BLAST of EY711589 vs. ExPASy Swiss-Prot
Match: GATA_ANASP (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Anabaena sp. (strain PCC 7120) GN=gatA PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.998e-23
Identity = 65/187 (34.76%), Postives = 94/187 (50.27%), Query Frame = 3
Query:    3 TRPDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVXMVGILAATVEDALVVYAAING 563
            T    L+QA     +   GE I +L G+ I VKD +     PTT  ++ L    P   ++    +L   GA++VGKTN+ E   G+S  N  Y V  NP+D S++                C VALG D GGS+R PA+ CGVVG KPT+G +   G++    ++  +G    +VED  ++  AI G
Sbjct:   43 TAQQALEQARAVDAKIAAGEEIGLLAGIPIGVKDNMCTKGIPTTCASRILENFVP-PYESTVTQKLLDAGAVVVGKTNLDEFAMGSSTENSAYQVTANPWDLSRVPGGSSGGSAAAVAAEECVVALGSDTGGSIRQPASFCGVVGLKPTYGLVSRYGLVAYASSLDQIGPFGKSVEDTAILLKAIAG 228          
BLAST of EY711589 vs. ExPASy Swiss-Prot
Match: GATA_SALTO (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440) GN=gatA PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 3.916e-23
Identity = 67/185 (36.22%), Postives = 94/185 (50.81%), Query Frame = 3
Query:   18 LKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVXMVGILAATVEDALVVYAAINGPLP 572
            L  A +   R   GEP+  L GV +AVKD +     PTT G+K L   RP   D+  V RLR  G +++GKTNM E   G+S     +G   NP+D S+I                 P+++G D GGS+R P A+ G VG KPT+G     G++  + ++   G  A TV DA +++  I G  P
Sbjct:   53 LDAARDVDSRRAAGEPLGPLAGVPVAVKDVLTTKGVPTTAGSKILADWRP-PYDSTIVRRLRAAGTVMLGKTNMDEFAMGSSTEYSAFGPTHNPWDLSRIPGGSGGGSSAALAAYETPLSIGSDTGGSIRQPGAVTGTVGVKPTYGGTSRYGLVAFSSSLDTPGPCARTVLDAALLHEVIGGHDP 236          
The following BLAST results are available for this feature:
BLAST of EY711589 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
GATA_ARCFU1.346e-2334.44Glutamyl-tRNA(Gln) amidotransferase subunit A OS=A... [more]
Y1954_ARCFU1.758e-2336.84Putative amidase AF_1954 OS=Archaeoglobus fulgidus... [more]
GATA_PROVI1.758e-2335.45Glutamyl-tRNA(Gln) amidotransferase subunit A OS=P... [more]
GATA_SALAI2.296e-2337.29Glutamyl-tRNA(Gln) amidotransferase subunit A OS=S... [more]
GATA_HALSA2.296e-2337.99Glutamyl-tRNA(Gln) amidotransferase subunit A OS=H... [more]
GATA_DESDA2.296e-2335.64Glutamyl-tRNA(Gln) amidotransferase subunit A OS=D... [more]
GATA_CARHZ2.998e-2334.85Glutamyl-tRNA(Gln) amidotransferase subunit A OS=C... [more]
GATA_ANAVT2.998e-2334.76Glutamyl-tRNA(Gln) amidotransferase subunit A OS=A... [more]
GATA_ANASP2.998e-2334.76Glutamyl-tRNA(Gln) amidotransferase subunit A OS=A... [more]
GATA_SALTO3.916e-2336.22Glutamyl-tRNA(Gln) amidotransferase subunit A OS=S... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-009-D10-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY711589 ID=EY711589; Name=EY711589; organism=Citrus sinensis; type=EST; length=916bp
CCACGCGTCCGGATATTCTAAAGCAAGCTACAGAGTCGACTCTTCGGTAT
AAAAAAGGAGAGCCAATATCGGTTCTAGATGGAGTCCTAATTGCAGTCAA
GGATGAAATTGATTGTTCTCCTTACCCAACTACAGGAGGCACCAAGTGGT
TGCATAAAGTTAGACCTTGCACAGGTGATGCATGCTGCGTTATGCGCCTC
AGATTGTGCGGCGCCATACTTGTTGGGAAAACTAATATGCATGAGCTCGG
GGCTGGAACAAGTGGGATAAATCCTCATTATGGGGTCGCTAGAAATCCAT
ACGACCCCAGCAAAATCACTGGGGGTTCTTCTAGTGGATCAGCAGCAGTG
GTGGCTGCAGGATTGTGCCCTGTCGCCCTTGGTGTTGATGGAGGAGGATC
CGTGCGGATGCCTGCAGCTCTCTGTGGTGTTGTTGGTTTTAAGCCAACTT
TCGGGCGCATACCTCTTTCTGGTGTTCTTCCACTGAACTGGACAGTANGA
ATGGTTGGAATTTTAGCAGCCACTGTAGAAGATGCATTGGTTGTTTATGC
AGCTATTAATGGTCCACTTCCTTCCCAACAGCCCACTTGTTTCATTGCAA
AAAGTATCGTTCCCACTGCTGAAGTCTGCAACATCAATATCAGCCATCCA
ATTGGCCAAGTATGATGCGTGGTTCAACGATTGCAGTGACGATATAAGAG
TATGCTGCTCTCATGCAGTGGACAAGCTTTGCGAACGTTATTGCTGGAAG
GTTGTAAAGGGTACTATCCCGAATATAAGAAGGATGGCGCTGGCACCATA
TATTGATATTGGGTTCTGAATGTAGCACTTCGCTCTCCTTCTATCTGCAA
AAATAAATTGTTCAAATCAAGGATGGAATTGCGGGGAACCCCTTAAGTCT
ATGGGTCTTTTCACAC
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