EY711586

Overview
NameEY711586
Unique NameEY711586
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length912
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY711586 vs. ExPASy Swiss-Prot
Match: PP433_ARATH (Pentatricopeptide repeat-containing protein At5g56310 OS=Arabidopsis thaliana GN=PCMP-E13 PE=2 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.801e-36
Identity = 95/278 (34.17%), Postives = 154/278 (55.40%), Query Frame = 2
Query:   17 IIINGFSQKNYILAKLLAFYVTSGYLINAQKVFEKTENPSTSIWNQMIRGHARSETPEK---SVYLYKQMIDKETEPDEYTYSFLLSVCARCGFFREGEQVHGRVLASGYCSNVFMRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMP--HRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKVGKWIHSYVEE---NFSVEREQX*YL*ICTYHMYASCGEIEEPME 826
            +II G ++ N  +AK +     +G+L  A  VF     P+T + N MIR  +  + P     ++ +Y+++     +PD +T+ F+L +  R      G Q+HG+V+  G+ S+V + T L+ +Y   G   G+G AR +FD+M  + V  WN+LL GY K G++D A  + + MP   RN VSWT +ISG A++G++ +A+ +F  M    V  D+V L+A LSACA++G L++G+ I SYV+    N +V              MYA  G I + ++
Sbjct:   38 MIITGLNRDNLNVAKFIEACSNAGHLRYAYSVFTHQPCPNTYLHNTMIRALSLLDEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQMYFSCG---GLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNN------AVIDMYAKSGNITKALD 306          

HSP 2 Score: 102.449 bits (254), Expect = 3.646e-21
Identity = 77/308 (25.00%), Postives = 138/308 (44.81%), Query Frame = 2
Query:   14 QIIINGFSQKNYILAKLLAFYVTSGYLINAQKVFEKTENPSTSIWNQM---------------------------------IRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGFFREGEQVHGRVLASGYCSNVFMRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKVGKWIHSYVEENFSVEREQX*YL*ICTYHMYASCGEIEEPMEC*KN 838
            Q+++ GF    +++  L+  Y + G L +A+K+F++      ++WN +                                 I G+A+S    +++ ++++M+ +  EPDE T   +LS CA  G    GE++         CS V  R   MN                       R+V   N+++  Y K G+I  A  +F+ +  RNVV+WTT+I+G A +G   +AL++FN M +A V  + V  +A LSAC+ +G + +GK + + +   + +      Y   C   +    G++ E  E  K+
Sbjct:  141 QVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERI---------CSYVDHRG--MN-----------------------RAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHY--GCMIDLLGRAGKLREADEVIKS 412          
BLAST of EY711586 vs. ExPASy Swiss-Prot
Match: PP169_ARATH (Pentatricopeptide repeat-containing protein At2g22410, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E28 PE=2 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 3.072e-36
Identity = 82/251 (32.67%), Postives = 143/251 (56.97%), Query Frame = 2
Query:   74 YVTSGYLINAQKVFEKTENPSTSIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGFFREGEQVHGRVLASGYCSNVFMRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKVGKWIHSYVEENFSVEREQX*YL*ICTYHMYASCGEIEEPM 823
            + + G + NA+KVF+++       WN +I G+ +    EK++Y+YK M  +  +PD+ T   L+S C+  G    G++ +  V  +G    + +   LM+++     +CG +  AR +FD++  R++VSW +++ GY + G +D + K+FD+M  ++VV W  MI G  Q  + + AL+LF EM+ +    D++ ++  LSAC+++G L VG WIH Y+E+ +S+       L      MYA CG I E +
Sbjct:  201 FASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMF----SKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEK-YSLSLNVA--LGTSLVDMYAKCGNISEAL 444          

HSP 2 Score: 114.775 bits (286), Expect = 7.099e-25
Identity = 85/285 (29.82%), Postives = 130/285 (45.61%), Query Frame = 2
Query:   11 AQIIINGFSQKNYILAKLLAFYVTSG--YLINAQKVFEKTENPSTSIWNQMIRGHARSETPEKSVYLYKQMIDK---ETEPDEYTYSFLLSVCARCGFFREGEQVHGRVLASGYCSNVFMRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKVGKWIHSYVEENFSVEREQX*YL*ICTYHMYASCGEIEEPMEC*KNAER 847
            AQ+IING     +  ++L+AF   S   YL  + K+ +  ENP+   WN  IRG + SE P++S  LYKQM+     E+ PD +TY  L  VCA       G  + G VL       + + +++ N  +     CG +  AR +FD+ P R +VSWN L+ GY K G+                               + +A+ ++  M    V  D V ++  +S+C+ +GDL  GK  + YV+EN          L      M++ CG+I E      N E+
Sbjct:   74 AQMIINGLILDPFASSRLIAFCALSESRYLDYSVKILKGIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGHMILGHVLK----LRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGE-------------------------------AEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKEN---GLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEK 320          

HSP 3 Score: 91.2781 bits (225), Expect = 8.405e-18
Identity = 57/228 (25.00%), Postives = 105/228 (46.05%), Query Frame = 2
Query:   62 LLAFYVTSGYLINAQKVFEKTENPSTSIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGFFREGEQVHGRVLASGYCSNVFMRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKVGKWIHSYVEENFSV 745
            +++ Y   G L  ++K+F+  E     +WN MI G  +++  + ++ L+++M    T+PDE T    LS C++ G    G  +H  +       NV + T+L+++Y                                   K G+I  A  +F  +  RN +++T +I G A +G +  A+S FNEM  A +  D++  +  LSAC   G ++ G+   S ++  F++
Sbjct:  329 MISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMY----------------------------------AKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNL 522          
BLAST of EY711586 vs. ExPASy Swiss-Prot
Match: PP175_ARATH (Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 8.938e-36
Identity = 83/273 (30.40%), Postives = 148/273 (54.21%), Query Frame = 2
Query:   47 YILAKLLAFYVTSGYLINAQKVFEKTENPSTSIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGFFREGEQVHGRVLASGYCSNVFMRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMR-RARVGLDQVALVAALSACAEIGDLKVGKWIHSYVEE-----NFSVEREQX*YL*ICTYHMYASCGEIEEPMEC*KNAER 847
            ++   L+  Y + G L +A KVF   +      WN MI G  +  +P+K++ L+K+M  ++ +    T   +LS CA+      G QV   +  +    N+ +   ++++Y   G    +  A+ LFD M  +  V+W ++L GY    D + A ++ + MP +++V+W  +IS   QNGK  +AL +F+E++ +  + L+Q+ LV+ LSACA++G L++G+WIHSY+++     NF V             HMY+ CG++E+  E   + E+
Sbjct:  167 FVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGS---IEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTS--------ALIHMYSKCGDLEKSREVFNSVEK 428          

HSP 2 Score: 109.383 bits (272), Expect = 2.982e-23
Identity = 76/270 (28.15%), Postives = 126/270 (46.67%), Query Frame = 2
Query:   17 IIINGFSQKNYILAKLLAFYVTSGY--LINAQKVFEKTENPSTSIWNQMIRGHARSETPEKSVYLYKQMI-DKETEPDEYTYSFLLSVCARCGFFREGEQVHGRVLASGYCSNVFMRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKVGKWIHSYVEENFSVEREQX*YL*ICTYHMYASCGEIEE 817
            +I  G     Y  +KL A    S +  L  A+KVF++   P++  WN +IR +A    P  S++ +  M+ + +  P++YT+ FL+   A       G+ +HG  + S   S+VF+  +L++ Y  S G+    C   +F  +  + VVSWNS++ G+V++G  D A ++F +M   +V +                                 V +V  LSACA+I +L+ G+ + SY+EEN          L      MY  CG IE+
Sbjct:   53 MIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCY-FSCGDLDSACK--VFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKA-------------------------------SHVTMVGVLSACAKIRNLEFGRQVCSYIEEN---RVNVNLTLANAMLDMYTKCGSIED 285          
BLAST of EY711586 vs. ExPASy Swiss-Prot
Match: PP425_ARATH (Pentatricopeptide repeat-containing protein At5g48910 OS=Arabidopsis thaliana GN=PCMP-H38 PE=2 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 3.397e-35
Identity = 93/290 (32.07%), Postives = 155/290 (53.45%), Query Frame = 2
Query:   11 AQIIINGFSQKNYILAKLLAFYVTSGY----LINAQKVFEKTENPSTSIWNQMIRGHARSETPEKSVYL---YKQMIDKETEPDEYTYSFLLSVCARCGFFREGEQVHGRVLASGYCSNVFMRTNLMNLYLMSGGECGVGCARLLF------DDMPARS--------VVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKVGKWIHSYVEENFSVEREQX*YL*ICTYHMYASCGEIEE 817
            A  I +G  +     A++L F  TS      L  A K+F +    +   WN +IRG + S+  +  + +   Y+ M D+  EP+ +T+  +L  CA+ G  +EG+Q+HG  L  G+  + F+ +NL+ +Y+M G    +  AR+LF       DM   +        +V WN ++ GY++ GD   A  +FD+M  R+VVSW TMISG + NG  + A+ +F EM++  +  + V LV+ L A + +G L++G+W+H Y E++  +  +    L      MY+ CG IE+
Sbjct:   44 AVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGF---MKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDS-GIRIDD--VLGSALIDMYSKCGIIEK 327          

HSP 2 Score: 75.485 bits (184), Expect = 4.773e-13
Identity = 60/246 (24.39%), Postives = 117/246 (47.56%), Query Frame = 2
Query:   29 GFSQKNYILAKLLAFYVTSGYLINAQKVFEKT--------------ENPSTSIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGFFREGEQVHGRV----LASGYCSNVFMRTNLMNLYLMSGGECGVGCARLLFDDMPAR-SVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKVGK 709
            GF    ++++ L+  YV  G++ +A+ +F K                +    +WN MI G+ R    + +    + + DK  +    +++ ++S  +  GFF++  +V   +    +   Y + V +   +  L  +  GE       L  +D   R   V  ++L+  Y K G I+ A  +F+ +P  NV++W+ MI+G A +G++  A+  F +MR+A V    VA +  L+AC+  G ++ G+
Sbjct:  158 GFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAA----RMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEW----LHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGR 395          
BLAST of EY711586 vs. ExPASy Swiss-Prot
Match: PP212_ARATH (Pentatricopeptide repeat-containing protein At3g04750, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E81 PE=2 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 7.567e-35
Identity = 100/304 (32.89%), Postives = 154/304 (50.66%), Query Frame = 2
Query:   17 IIING-FSQKNYILAKLLAFYVTSGYLINAQKVFEKTENPSTSIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGFFREGEQVHGRVLASG--YCSNVFMRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNG-KSRQALSLFNEMRRA-RVGLDQVALVAALSACAEIGDLKVGKWIHSYVEENFSVEREQX*YL*ICTYHMYASCGEIEEPMEC*KNA---------ERILVLXRHDNGLQA 886
            II++G  S  NY+   L+ FY+  G    A+KVF +  +P  S +N MI G+A+     +++ LY +M+    EPDEYT   LL  C      R G+ VHG +   G  Y SN+ +   L+++Y         G A+  FD M  + + SWN+++ G+V+ GD++ A  +FD+MP R++VSW +++ G ++ G   R    LF EM    +V  D+V +V+ +S  A  G+L  G+W+H  V     ++ +   +L      MY  CG IE      K A           I  L  H NG QA
Sbjct:  156 IIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKES---GLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLV---IRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITGLAFHGNGQQA 453          
BLAST of EY711586 vs. ExPASy Swiss-Prot
Match: PP367_ARATH (Pentatricopeptide repeat-containing protein At5g06540 OS=Arabidopsis thaliana GN=PCMP-H88 PE=2 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 8.366e-34
Identity = 85/280 (30.36%), Postives = 149/280 (53.21%), Query Frame = 2
Query:   20 IINGFSQKNYILA------KLLAFYVT-------SGYLINAQKVFEKTENPSTSIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGFFREGEQVHGRVLASGYCSNVFMRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKVGKWIHSYVEENFSVEREQX*YL*ICTYHMYASCGEIEE 817
            II+GF  + ++++      +LLA  V        +  L  A  +F + +NP+  ++N +IR  +    P K+   Y QM+     PD  T+ FL+   +       GEQ H +++  G+ ++V++  +L+++Y      CG +  A  +F  M  R VVSW S++ GY K G ++ A ++FDEMPHRN+ +W+ MI+G A+N    +A+ LF  M+R  V  ++  +V+ +S+CA +G L+ G+  + YV ++          L      M+  CG+IE+
Sbjct:   30 IIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMY----ANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNL---ILGTALVDMFWRCGDIEK 302          

HSP 2 Score: 77.411 bits (189), Expect = 1.256e-13
Identity = 58/252 (23.02%), Postives = 115/252 (45.63%), Query Frame = 2
Query:   62 LLAFYVTSGYLINAQKVFEKTENPSTSIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGFFREGEQVHGRVLASGYCSNVFMRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKVGKWIHSYVEENFSVEREQX*YL*ICTYHMYASCGEIEE 817
            ++A Y   G + NA+++F++  + +   W+ MI G+A++   EK++ L++ M  +    +E     ++S CA  G    GE+ +  V+ S    N+ + T L++++                          W          GDI+ A  +F+ +P  + +SW+++I G A +G + +A+  F++M         V   A LSAC+  G ++ G  I+  ++++  +E     Y   C   M    G++ E
Sbjct:  189 MVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMF--------------------------WRC--------GDIEKAIHVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENMKKDHGIEPRLEHY--GCIVDMLGRAGKLAE 404          
BLAST of EY711586 vs. ExPASy Swiss-Prot
Match: PP167_ARATH (Pentatricopeptide repeat-containing protein At2g21090 OS=Arabidopsis thaliana GN=PCMP-E48 PE=2 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 5.423e-33
Identity = 74/228 (32.46%), Postives = 126/228 (55.26%), Query Frame = 2
Query:   47 YILAKLLAFYVTSGYLINAQKVFEKTENPSTSIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGFFREGEQVHGRVLASGYCSNVFMRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKVGKWIHSYV 727
            Y    +++ YV SG L+ A+ VF+         WN M+ G+A+     ++++ YK+      + +E++++ LL+ C +    +   Q HG+VL +G+ SNV +  ++++ Y     +CG +  A+  FD+M  + +  W +L+ GY K GD++ A K+F EMP +N VSWT +I+G  + G   +AL LF +M    V  +Q    + L A A I  L+ GK IH Y+
Sbjct:  114 YSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAY----AKCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYM 337          

HSP 2 Score: 98.2117 bits (243), Expect = 6.876e-20
Identity = 58/197 (29.44%), Postives = 99/197 (50.25%), Query Frame = 2
Query:  251 YSFLLSVCARCG---FFREGEQVHGRVLASGYCS-NVFMRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKVGKWIHSYVEENFSVEREQX*YL*ICTYHMYASCGEIEEPMEC 829
            +  L S+  +CG     ++G+ +H  +  +G+   N  +  +L+ +Y+  G       A  +FD M  R++ SWN+++ GYVK G +  A  +FD MP R+VVSW TM+ G AQ+G   +AL  + E RR+ +  ++ +    L+AC +   L++ +  H  V     +       L       YA CG++E    C
Sbjct:   46 FDLLASLLQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPID---ACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNV---VLSCSIIDAYAKCGQMESAKRC 236          

HSP 3 Score: 80.1073 bits (196), Expect = 1.938e-14
Identity = 58/227 (25.55%), Postives = 108/227 (47.58%), Query Frame = 2
Query:   47 YILAKLLAFYVTSGYLINAQKVFEKTENPSTSIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGFFREGEQVHGRVLASGYCSNVFMRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRN-VVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKVG-KWIHS 721
            +I   L++ Y   G +  A+K+F +    +   W  +I G+ R  +  +++ L+++MI    +P+++T+S  L   A     R G+++HG ++          RTN+                       P   V+S  SL+  Y K G ++ + ++F     ++  V W TMIS  AQ+G   +AL + ++M + RV  ++  LV  L+AC+  G ++ G +W  S
Sbjct:  246 HIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMI----------RTNVR----------------------PNAIVIS--SLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNACSHSGLVEEGLRWFES 438          
BLAST of EY711586 vs. ExPASy Swiss-Prot
Match: PP354_ARATH (Pentatricopeptide repeat-containing protein At4g37380, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H48 PE=2 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 7.082e-33
Identity = 84/259 (32.43%), Postives = 145/259 (55.98%), Query Frame = 2
Query:   59 KLLAFYVTSGYLINAQKVFEKTENPSTSIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGFFREGEQVHGRVLASGYCSNVFMRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNE-MRRARVGLDQVALVAALSACAEIGDLKVGKWIHSYVEEN---FSVEREQX*YL*ICT--YHMYASCGEIEE 817
            KL   Y + G + ++  +F +T +P   ++   I   + +   +++  LY Q++  E  P+E+T+S LL  C+     + G+ +H  VL  G   + ++ T L+++Y   G    V  A+ +FD MP RS+VS  +++  Y K+G+++ A  +FD M  R++VSW  MI G AQ+G    AL LF + +   +   D++ +VAALSAC++IG L+ G+WIH +V+ +    +V+        +CT    MY+ CG +EE
Sbjct:   69 KLHRAYASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCST----KSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGD---VVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVK--------VCTGLIDMYSKCGSLEE 312          

HSP 2 Score: 85.8853 bits (211), Expect = 3.531e-16
Identity = 67/281 (23.84%), Postives = 126/281 (44.84%), Query Frame = 2
Query:    8 SAQIIINGFSQKNYILAK-LLAFYVTSGYLINAQKVFEKTENPSTSIWNQMIRGHARSETPEKSVYLYKQMI-DKETEPDEYTYSFLLSVCARCGFFREGEQVHGRVLASGYCSNVFMRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLD--QVALVAALSACAEIGDLKVGKWIHSYVEENFSVEREQX*YL*ICTYHMYASCGEIEEPMEC*KN 838
            SAQ + +   +++ + +  ++  Y   G +  A+ +F+         WN MI G+A+   P  ++ L+++++ + + +PDE T    LS C++ G    G  +H  V +S    NV + T L+++Y                                   K G ++ A  +F++ P +++V+W  MI+G A +G S+ AL LFNEM +   GL    +  +  L ACA  G +  G  I   + + + ++ +   Y   C   +    G+++   E  KN
Sbjct:  179 SAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYS----------------------------------KCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEM-QGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHY--GCLVSLLGRAGQLKRAYETIKN 422          
BLAST of EY711586 vs. ExPASy Swiss-Prot
Match: PP295_ARATH (Pentatricopeptide repeat-containing protein At3g62890 OS=Arabidopsis thaliana GN=PCMP-H82 PE=2 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 5.995e-32
Identity = 81/233 (34.76%), Postives = 129/233 (55.36%), Query Frame = 2
Query:  143 IWNQMIRG---HARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGFFREGEQVHGRVLASGYCSNVFMRTNLMNLYLMSGGECG-VGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMR-----RARVGLDQVALVAALSACAEIGDLKVGKWIHSYVEENFSVEREQX*YL*ICTYHMYASCGEIE 814
            +WN +IR    +  S      + +Y +M +    PD +T+ FLL           G++ H ++L  G   + F+RT+L+N+Y      CG +  A+ +FDD  ++ + +WNS++  Y K G ID A K+FDEMP RNV+SW+ +I+G    GK ++AL LF EM+      A V  ++  +   LSAC  +G L+ GKW+H+Y+++ + VE +    L      MYA CG +E
Sbjct:   26 LWNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQRTHAQILLFGLDKDPFVRTSLLNMY----SSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDK-YHVEIDI--VLGTALIDMYAKCGSLE 251          
BLAST of EY711586 vs. ExPASy Swiss-Prot
Match: PPR23_ARATH (Pentatricopeptide repeat-containing protein At1g09190 OS=Arabidopsis thaliana GN=PCMP-E70 PE=2 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 1.023e-31
Identity = 80/229 (34.93%), Postives = 129/229 (56.33%), Query Frame = 2
Query:   62 LLAFYVT-SGYLIN---AQKVFEKTENPSTSIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGFFREGEQVHGRVLASGYCSNVFMRTNLMNLYLMSGGECGVGCARLLFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEMRRARVGLDQVALVAALSACAEIGDLKVGKWIHSYVEEN 736
            LLA +++  G L N   A +VF   +NP+  ++N MI+ ++    P +S+  +  M  +    DEYTY+ LL  C+     R G+ VHG ++ +G+     +R  ++ LY  SGG   +G A+ +FD+M  R+VV WN +++G+   GD++    +F +M  R++VSW +MIS  ++ G+ R+AL LF EM       D+  +V  L   A +G L  GKWIHS  E +
Sbjct:   38 LLAHFISICGSLSNSDYANRVFSHIQNPNVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSSLSDLRFGKCVHGELIRTGFHRLGKIRIGVVELYT-SGGR--MGDAQKVFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAESS 263          

HSP 2 Score: 106.686 bits (265), Expect = 1.933e-22
Identity = 70/252 (27.78%), Postives = 128/252 (50.79%), Query Frame = 2
Query:   14 QIIINGFSQKNYILAKLLAFYVTSGYLINAQKVFEKTENPSTSIWNQMIRGHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGFFREGEQVHGRVLASGYCSNVFMRTNLM----NLYLMSGGECGVGCARL--LFDDMPARSVVSWNSLLKGYVKRGDIDGAWKIFDEMPHRNVVSWTTMISGCAQNGKSRQALSLFNEM-RRARVGLDQVALVAALSACAEIGDLKVGKWIHSYVEENFSVE 748
            ++I  GF +   I   ++  Y + G + +AQKVF++    +  +WN MIRG   S   E+ ++L+KQM ++       +++ ++S  ++CG  RE  ++   ++  G+  +      ++    +L ++  G+     A    LF D     +   N+L+  Y K GD++ A  IF +M  RNVVSW T+ISG A NGK    + LF+ M    +V  ++   +  L+ C+  G ++ G+ +   + E F +E
Sbjct:  127 ELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSI----VSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDF----ITVGNALVDFYCKSGDLEAATAIFRKMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEELFGLMMERFKLE 370          
The following BLAST results are available for this feature:
BLAST of EY711586 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 205
Match NameE-valueIdentityDescription
PP433_ARATH1.801e-3634.17Pentatricopeptide repeat-containing protein At5g56... [more]
PP169_ARATH3.072e-3632.67Pentatricopeptide repeat-containing protein At2g22... [more]
PP175_ARATH8.938e-3630.40Pentatricopeptide repeat-containing protein At2g29... [more]
PP425_ARATH3.397e-3532.07Pentatricopeptide repeat-containing protein At5g48... [more]
PP212_ARATH7.567e-3532.89Pentatricopeptide repeat-containing protein At3g04... [more]
PP367_ARATH8.366e-3430.36Pentatricopeptide repeat-containing protein At5g06... [more]
PP167_ARATH5.423e-3332.46Pentatricopeptide repeat-containing protein At2g21... [more]
PP354_ARATH7.082e-3332.43Pentatricopeptide repeat-containing protein At4g37... [more]
PP295_ARATH5.995e-3234.76Pentatricopeptide repeat-containing protein At3g62... [more]
PPR23_ARATH1.023e-3134.93Pentatricopeptide repeat-containing protein At1g09... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-702-009-D07-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY711586 ID=EY711586; Name=EY711586; organism=Citrus sinensis; type=EST; length=912bp
CCACGCGTCCGCTCAAATAATCATTAACGGCTTTTCCCAGAAGAACTACA
TCCTCGCAAAGCTCTTAGCTTTCTACGTGACATCGGGTTATCTCATAAAT
GCCCAAAAGGTTTTTGAAAAAACTGAAAACCCAAGTACTTCTATATGGAA
CCAAATGATTAGAGGCCATGCTAGGAGCGAAACGCCTGAAAAATCAGTTT
ACTTGTACAAACAAATGATAGACAAAGAGACTGAGCCTGATGAGTACACG
TATTCGTTTCTTTTGAGTGTGTGCGCAAGATGTGGGTTCTTTAGAGAGGG
GGAGCAGGTTCATGGGAGAGTTTTGGCAAGTGGGTATTGCTCAAATGTGT
TTATGAGGACAAATTTGATGAATTTGTATTTGATGAGTGGGGGGGAGTGC
GGCGTTGGTTGCGCGCGTCTGCTGTTTGACGATATGCCTGCGAGGAGTGT
TGTGAGTTGGAATTCGTTGCTTAAGGGGTATGTTAAGCGTGGAGATATTG
ATGGGGCATGGAAGATTTTTGATGAGATGCCACACAGGAATGTCGTTTCG
TGGACGACCATGATTTCGGGGTGTGCTCAGAATGGGAAGTCCAGGCAAGC
GTTGTCTTTGTTTAACGAGATGAGAAGAGCCCGTGTGGGATTGGATCAAG
TGGCGTTGGTGGCAGCTTTATCGGCTTGTGCTGAAATAGGGGATTTGAAA
GTGGGAAAGTGGATACATTCATATGTTGAGGAGAACTTTTCTGTTGAAAG
AGAACAGNTTTAGTATCTTTGAATATGCACTTATCATATGTATGCTAGTT
GTGGCGAGATTGAAGAGCCCATGGAGTGTTAAAAAAATGCAGAGAGAATA
CTGGTTCTTGNACGGCATGATAACGGATTGCAAGCAAGCCTATCACAGAA
ACTCTGTTTTCT
back to top