EY711581

Overview
NameEY711581
Unique NameEY711581
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length914
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY711581 vs. ExPASy Swiss-Prot
Match: CSEB_STRCO (Transcriptional regulatory protein cseB OS=Streptomyces coelicolor GN=cseB PE=1 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 4.787e-21
Identity = 68/163 (41.72%), Postives = 84/163 (51.53%), Query Frame = 1
Query:    7 LPDGDGKQLISELRGWLAVPILVLSARDREEEKVAALDAGADDYLTKPFGVPELLARIRAQLRRHGQTG--------TVAATSKV-AFGEIEVDLATHEVWRQGLPVHLTPIEYRLLCAMIRGQSRVLTHRQLLLEVWGLDYVDRAHYLRVHMAHLRQKLEAD 468
            LP  DG  L   +R    VP+++LSAR    + V  L+AGADDY+TKPF    L+ARIRA LRR G  G          A T  V  FG++EVD    EV R G PV LTP E RLL         VL+  +LL  VW   +      + VH+  LR K+  D
Sbjct:   58 LPGLDGVSLCRRIRDESTVPVIMLSARADSIDVVLGLEAGADDYVTKPFDGAVLVARIRAVLRRFGHAGGGDRTEGAGAAETGGVLTFGDLEVDTDGMEVRRAGRPVGLTPTEMRLLLEFSSAPGTVLSRDKLLERVWDYGWGGDTRVVDVHVQRLRTKIGQD 220          
BLAST of EY711581 vs. ExPASy Swiss-Prot
Match: YCLJ_BACSU (Uncharacterized transcriptional regulatory protein yclJ OS=Bacillus subtilis GN=yclJ PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 8.165e-21
Identity = 61/172 (35.47%), Postives = 95/172 (55.23%), Query Frame = 1
Query:    7 LPDGDGKQLISELRGWLAVPILVLSARDREEEKVAALDAGADDYLTKPFGVPELLARIRAQLRRHGQTGTVAATSKVAFGE-IEVDLATHEVWRQGLPV-HLTPIEYRLLCAMIRGQSRVLTHRQLLLEVWGLDYVDRAHYLRVHMAHLRQKLEADPAQPQYFITELQVGYR 516
            LP  DG  +  ++R    VPI++L+A+D E ++V   + GADDY+TKPF    L+ARI+A +RR+  TG       +   E   ++  T EV   G PV +LTP E+ LL  +++   +V +  QLL +VWG  +      + VH+  LR+KL ++     +  T   VGY+
Sbjct:   54 LPSMDGVTICRKIRETSTVPIIMLTAKDTESDQVIGFEMGADDYVTKPFSPLTLVARIKAVIRRYKATGKAVIDEDMIETECFTINKKTREVLLNGEPVENLTPKEFDLLYYLVQNPRQVFSREQLLEQVWGYQFYGDERTVDVHIKRLRKKLASE--DKPFLYTVWGVGYK 223          
BLAST of EY711581 vs. ExPASy Swiss-Prot
Match: RESD_BACSU (Transcriptional regulatory protein resD OS=Bacillus subtilis GN=resD PE=3 SV=2)

HSP 1 Score: 101.293 bits (251), Expect = 8.165e-21
Identity = 58/177 (32.77%), Postives = 91/177 (51.41%), Query Frame = 1
Query:    1 LGLPDGDGKQLISELRGWLAVPILVLSARDREEEKVAALDAGADDYLTKPFGVPELLARIRAQLRRHGQTGTVAATSK----VAFGEIEVDLATHEVWRQGLPVHLTPIEYRLLCAMIRGQSRVLTHRQLLLEVWGLDYVDRAHYLRVHMAHLRQKL-EADPAQPQYFITELQVGYR 516
            L +P  DG ++  ++R   A PI++L+A+  E  +V   +AG DDY+ KPF   E++ R++A LRR  QT    A +     + F  + +D   H V   G  V LTP EY LL  + +   +V    +LL EVW  ++      +  H+  LR+KL +  P   +  +T   VGY+
Sbjct:   58 LMMPGTDGIEVCRQIREKKATPIIMLTAKGEEANRVQGFEAGTDDYIVKPFSPREVVLRVKALLRRASQTSYFNANTPTKNVLVFSHLSIDHDAHRVTADGTEVSLTPKEYELLYFLAKTPDKVYDREKLLKEVWQYEFFGDLRTVDTHVKRLREKLNKVSPEAAKKIVTVWGVGYK 234          
BLAST of EY711581 vs. ExPASy Swiss-Prot
Match: TCRA2_MYCTU (Transcriptional regulatory protein tcrA OS=Mycobacterium tuberculosis GN=tcrA PE=3 SV=2)

HSP 1 Score: 100.908 bits (250), Expect = 1.066e-20
Identity = 64/176 (36.36%), Postives = 96/176 (54.55%), Query Frame = 1
Query:    7 LPDGDGKQLISELRGWLA-VPILVLSARDREEEKVAALDAGADDYLTKPFGVPELLARIRAQLRRHGQTGTVAATSKVAFGEIEVDLATHEVWRQGLPVHLTPIEYRLLCAMIRGQSRVLTHRQLLLEVWGLDYVDRAHYLRVHMAHLRQKLEADPAQPQYFITELQ----VGYRL 519
            LP  DG ++ + LR      P+L+L+AR    +++A LD GADDYLTKPF + EL AR+RA  RR    G +     +  G++ +D + H VWR    + L+  E+ LL A+IR    V T  QLL   W   Y  R++ + V++ +LR K++       + +T L+     GYRL
Sbjct:   76 LPGIDGFEVCARLRRQRVWTPVLMLTARGAVTDRIAGLDGGADDYLTKPFNLDELFARLRALSRR----GPIPRPPTLEAGDLRLDPSEHRVWRADTEIRLSHKEFTLLEALIRRPGIVHTRAQLLERCWDAAYEARSNIVDVYIRYLRDKIDR-----PFGVTSLETIRGAGYRL 242          
BLAST of EY711581 vs. ExPASy Swiss-Prot
Match: TCRA1_MYCTU (Transcriptional regulatory protein tcrA OS=Mycobacterium tuberculosis GN=tcrA PE=1 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 1.066e-20
Identity = 64/176 (36.36%), Postives = 96/176 (54.55%), Query Frame = 1
Query:    7 LPDGDGKQLISELRGWLA-VPILVLSARDREEEKVAALDAGADDYLTKPFGVPELLARIRAQLRRHGQTGTVAATSKVAFGEIEVDLATHEVWRQGLPVHLTPIEYRLLCAMIRGQSRVLTHRQLLLEVWGLDYVDRAHYLRVHMAHLRQKLEADPAQPQYFITELQ----VGYRL 519
            LP  DG ++ + LR      P+L+L+AR    +++A LD GADDYLTKPF + EL AR+RA  RR    G +     +  G++ +D + H VWR    + L+  E+ LL A+IR    V T  QLL   W   Y  R++ + V++ +LR K++       + +T L+     GYRL
Sbjct:   76 LPGIDGFEVCARLRRQRVWTPVLMLTARGAVTDRIAGLDGGADDYLTKPFNLDELFARLRALSRR----GPIPRPPTLEAGDLRLDPSEHRVWRADTEIRLSHKEFTLLEALIRRPGIVHTRAQLLERCWDAAYEARSNIVDVYIRYLRDKIDR-----PFGVTSLETIRGAGYRL 242          
BLAST of EY711581 vs. ExPASy Swiss-Prot
Match: SRRA_STAAW (Transcriptional regulatory protein srrA OS=Staphylococcus aureus (strain MW2) GN=srrA PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 1.066e-20
Identity = 62/178 (34.83%), Postives = 96/178 (53.93%), Query Frame = 1
Query:    1 LGLPDGDGKQLISELRGWLAVPILVLSARDREEEKVAALDAGADDYLTKPFGVPELLARIRAQLRRHGQTGTVA-----ATSKVAFGEIEVDLATHEVWRQGLPVHLTPIEYRLLCAMIRGQSRVLTHRQLLLEVWGLDYVDRAHYLRVHMAHLRQKLEADPAQPQYFI-TELQVGYR 516
            L LP+ DG Q+ ++LR     PI++L+A+  E  +V   ++GADDY+ KPF   E++ R++A LRR  Q+ TV      A   + F  +E+D   H V      V+LTP EY LL  + +  ++V    QLL EVW  ++      +  H+  LR+KL    ++  + I T   VGY+
Sbjct:   54 LMLPEMDGIQVATKLREHKQTPIIMLTAKGEETNRVEGFESGADDYIVKPFSPREVVLRVKALLRR-TQSTTVEQSEPHARDVIEFKHLEIDNDAHRVLADNQEVNLTPKEYELLIYLAKTPNKVFDREQLLKEVWHYEFYGDLRTVDTHVKRLREKLNRVSSEAAHMIQTVWGVGYK 230          
BLAST of EY711581 vs. ExPASy Swiss-Prot
Match: SRRA_STAAU (Transcriptional regulatory protein srrA OS=Staphylococcus aureus GN=srrA PE=2 SV=2)

HSP 1 Score: 100.908 bits (250), Expect = 1.066e-20
Identity = 62/178 (34.83%), Postives = 96/178 (53.93%), Query Frame = 1
Query:    1 LGLPDGDGKQLISELRGWLAVPILVLSARDREEEKVAALDAGADDYLTKPFGVPELLARIRAQLRRHGQTGTVA-----ATSKVAFGEIEVDLATHEVWRQGLPVHLTPIEYRLLCAMIRGQSRVLTHRQLLLEVWGLDYVDRAHYLRVHMAHLRQKLEADPAQPQYFI-TELQVGYR 516
            L LP+ DG Q+ ++LR     PI++L+A+  E  +V   ++GADDY+ KPF   E++ R++A LRR  Q+ TV      A   + F  +E+D   H V      V+LTP EY LL  + +  ++V    QLL EVW  ++      +  H+  LR+KL    ++  + I T   VGY+
Sbjct:   54 LMLPEMDGIQVATKLREHKQTPIIMLTAKGEETNRVEGFESGADDYIVKPFSPREVVLRVKALLRR-TQSTTVEQSEPHARDVIEFKHLEIDNDAHRVLADNQEVNLTPKEYELLIYLAKTPNKVFDREQLLKEVWHYEFYGDLRTVDTHVKRLREKLNRVSSEAAHMIQTVWGVGYK 230          
BLAST of EY711581 vs. ExPASy Swiss-Prot
Match: SRRA_STAAS (Transcriptional regulatory protein srrA OS=Staphylococcus aureus (strain MSSA476) GN=srrA PE=3 SV=2)

HSP 1 Score: 100.908 bits (250), Expect = 1.066e-20
Identity = 62/178 (34.83%), Postives = 96/178 (53.93%), Query Frame = 1
Query:    1 LGLPDGDGKQLISELRGWLAVPILVLSARDREEEKVAALDAGADDYLTKPFGVPELLARIRAQLRRHGQTGTVA-----ATSKVAFGEIEVDLATHEVWRQGLPVHLTPIEYRLLCAMIRGQSRVLTHRQLLLEVWGLDYVDRAHYLRVHMAHLRQKLEADPAQPQYFI-TELQVGYR 516
            L LP+ DG Q+ ++LR     PI++L+A+  E  +V   ++GADDY+ KPF   E++ R++A LRR  Q+ TV      A   + F  +E+D   H V      V+LTP EY LL  + +  ++V    QLL EVW  ++      +  H+  LR+KL    ++  + I T   VGY+
Sbjct:   54 LMLPEMDGIQVATKLREHKQTPIIMLTAKGEETNRVEGFESGADDYIVKPFSPREVVLRVKALLRR-TQSTTVEQSEPHARDVIEFKHLEIDNDAHRVLADNQEVNLTPKEYELLIYLAKTPNKVFDREQLLKEVWHYEFYGDLRTVDTHVKRLREKLNRVSSEAAHMIQTVWGVGYK 230          
BLAST of EY711581 vs. ExPASy Swiss-Prot
Match: SRRA_STAAR (Transcriptional regulatory protein srrA OS=Staphylococcus aureus (strain MRSA252) GN=srrA PE=3 SV=2)

HSP 1 Score: 100.908 bits (250), Expect = 1.066e-20
Identity = 62/178 (34.83%), Postives = 96/178 (53.93%), Query Frame = 1
Query:    1 LGLPDGDGKQLISELRGWLAVPILVLSARDREEEKVAALDAGADDYLTKPFGVPELLARIRAQLRRHGQTGTVA-----ATSKVAFGEIEVDLATHEVWRQGLPVHLTPIEYRLLCAMIRGQSRVLTHRQLLLEVWGLDYVDRAHYLRVHMAHLRQKLEADPAQPQYFI-TELQVGYR 516
            L LP+ DG Q+ ++LR     PI++L+A+  E  +V   ++GADDY+ KPF   E++ R++A LRR  Q+ TV      A   + F  +E+D   H V      V+LTP EY LL  + +  ++V    QLL EVW  ++      +  H+  LR+KL    ++  + I T   VGY+
Sbjct:   54 LMLPEMDGIQVATKLREHKQTPIIMLTAKGEETNRVEGFESGADDYIVKPFSPREVVLRVKALLRR-TQSTTVEQSEPHARDVIEFKHLEIDNDAHRVLADNQEVNLTPKEYELLIYLAKTPNKVFDREQLLKEVWHYEFYGDLRTVDTHVKRLREKLNRVSSEAAHMIQTVWGVGYK 230          
BLAST of EY711581 vs. ExPASy Swiss-Prot
Match: SRRA_STAAN (Transcriptional regulatory protein srrA OS=Staphylococcus aureus (strain N315) GN=srrA PE=1 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 1.066e-20
Identity = 62/178 (34.83%), Postives = 96/178 (53.93%), Query Frame = 1
Query:    1 LGLPDGDGKQLISELRGWLAVPILVLSARDREEEKVAALDAGADDYLTKPFGVPELLARIRAQLRRHGQTGTVA-----ATSKVAFGEIEVDLATHEVWRQGLPVHLTPIEYRLLCAMIRGQSRVLTHRQLLLEVWGLDYVDRAHYLRVHMAHLRQKLEADPAQPQYFI-TELQVGYR 516
            L LP+ DG Q+ ++LR     PI++L+A+  E  +V   ++GADDY+ KPF   E++ R++A LRR  Q+ TV      A   + F  +E+D   H V      V+LTP EY LL  + +  ++V    QLL EVW  ++      +  H+  LR+KL    ++  + I T   VGY+
Sbjct:   54 LMLPEMDGIQVATKLREHKQTPIIMLTAKGEETNRVEGFESGADDYIVKPFSPREVVLRVKALLRR-TQSTTVEQSEPHARDVIEFKHLEIDNDAHRVLADNQEVNLTPKEYELLIYLAKTPNKVFDREQLLKEVWHYEFYGDLRTVDTHVKRLREKLNRVSSEAAHMIQTVWGVGYK 230          
The following BLAST results are available for this feature:
BLAST of EY711581 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 208
Match NameE-valueIdentityDescription
CSEB_STRCO4.787e-2141.72Transcriptional regulatory protein cseB OS=Strepto... [more]
YCLJ_BACSU8.165e-2135.47Uncharacterized transcriptional regulatory protein... [more]
RESD_BACSU8.165e-2132.77Transcriptional regulatory protein resD OS=Bacillu... [more]
TCRA2_MYCTU1.066e-2036.36Transcriptional regulatory protein tcrA OS=Mycobac... [more]
TCRA1_MYCTU1.066e-2036.36Transcriptional regulatory protein tcrA OS=Mycobac... [more]
SRRA_STAAW1.066e-2034.83Transcriptional regulatory protein srrA OS=Staphyl... [more]
SRRA_STAAU1.066e-2034.83Transcriptional regulatory protein srrA OS=Staphyl... [more]
SRRA_STAAS1.066e-2034.83Transcriptional regulatory protein srrA OS=Staphyl... [more]
SRRA_STAAR1.066e-2034.83Transcriptional regulatory protein srrA OS=Staphyl... [more]
SRRA_STAAN1.066e-2034.83Transcriptional regulatory protein srrA OS=Staphyl... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-009-D02-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY711581 ID=EY711581; Name=EY711581; organism=Citrus sinensis; type=EST; length=914bp
CTCGGCCTGCCGGACGGCGACGGCAAACAGTTGATCAGCGAACTGCGGGG
ATGGCTGGCGGTGCCGATCCTGGTGTTGTCGGCGCGGGATCGCGAAGAGG
AAAAAGTCGCCGCCCTGGACGCCGGCGCCGATGACTACCTGACCAAACCT
TTCGGCGTGCCCGAGTTACTGGCGCGCATCCGTGCGCAACTGCGTCGGCA
CGGGCAAACCGGCACCGTGGCGGCCACCAGCAAGGTGGCATTTGGCGAGA
TTGAGGTGGACCTGGCGACCCATGAAGTGTGGCGCCAAGGCCTGCCGGTG
CACCTGACGCCCATCGAATACCGCTTGCTGTGCGCGATGATTCGCGGGCA
GAGCCGGGTGCTCACCCATCGGCAGTTATTGCTTGAAGTGTGGGGACTGG
ACTACGTGGACCGCGCCCACTATCTGCGGGTGCATATGGCGCATCTGCGG
CAGAAGCTGGAGGCCGACCCGGCCCAGCCGCAGTACTTCATCACCGAGTT
GCAGGTGGGCTACCGACTGGTGGGCTTGTGAACAGATGCGCGGCGGCGAA
ATCGACAAACACGCGAATTTTCGGCGAGAGGTGCCGGCTGGATGGCCACA
GGGCCCAGAACTGACCCTGGTCATCGGAATGGCCGTCGAGCACGGGTTCC
AGCTGGGCCTCGGCGAGTGCTTCGCGGGCCAGGAAAGTCCGCACGTAGGC
AATGCCATGGGNCGTCATCGCAGCCCGGAGCATGGCTTCCATATTTGTTC
AAGTCAGGGCGGTGGGGCAGCGCATTNNGGTGATGGNCCGGGTGGCGGAT
AAGGTCCAGTCATGATTTTTCCNGTGGTGGCGAAGCGGTACGCAAACCGG
NTGATGCTCCAGTCCCTCAAGGAATTTGCCCGNCGNTGGCCCCCAGGACT
CGGGGATGGCCCAG
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