EY711571

Overview
NameEY711571
Unique NameEY711571
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length931
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY711571 vs. ExPASy Swiss-Prot
Match: GAL1_LACBA (Galactokinase OS=Lactobacillus brevis (strain ATCC 367 / JCM 1170) GN=galK PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.567e-11
Identity = 59/205 (28.78%), Postives = 92/205 (44.88%), Query Frame = 3
Query:  102 FDNLNSKFIQVFAQPPDVYARCPGRVNLIGEHIDYEGYSVLPMAIRQDTIVAIRKHDSKEAEKVLKIANVSDKYNMCTYPAEPDQEIDIKHHQWGHYFICGYKAFYEYVKAKGLDVGPPVGLDILVDGTVPTGSGLSSSTAFVCSSTVALMAAFGVEVPKKEIAQLTCECE-QFIGTQSGGMXXXISIMAKSGXAELIDSTLFEH 713
            F +L +++ + F   P      PGR+NLIGE+ D+ G  V P AI   T  A    D K+    +  ANV D   + T+    D     K   W +Y        +E  K    D+    G D+ V G +P  SGLSSS +        L AA+G+++ + E+ ++  + E  + G  +G M      M K   A L+D+   ++
Sbjct:    3 FASLATEYQEKFDVAPQRVFFSPGRINLIGEYTDFNGGHVFPAAISMGTYAAYSARDDKQFR--VYSANVPDA-GVLTFSL--DNLAFDKADNWANYL---KGMLFELAKQ---DLTIDHGFDLFVHGNLPDASGLSSSASMEMLMGEILHAAYGMKLDEVEMVKVGQQVENDYFGLNTGIMDQFAIGMGKKDQAILLDTNTMDY 196          
BLAST of EY711571 vs. ExPASy Swiss-Prot
Match: GAL1_BACHD (Galactokinase OS=Bacillus halodurans GN=galK PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.567e-11
Identity = 56/183 (30.60%), Postives = 83/183 (45.36%), Query Frame = 3
Query:  168 PGRVNLIGEHIDYEGYSVLPMAIRQDTIVAIRKHDSKEAEKVLKIANVSDKYNMCTYPAEPDQEIDIKHHQWGHYFICGYKAFYEYVKAKGLDVGPPVGLDILVDGTVPTGSGLSSSTAFVCSSTVALMAAFGVEVPKKEIAQLTCECE-QFIGTQSGGMXXXISIMAKSGXAELIDSTLFEH 713
            PGRVNLIGEH DY G  V P A+   T + I+  D  + E  L+ AN    ++        D   D K   WG+Y     K     +   G+D+    G  I   G +P G+GLSSS +    +   L    G+++ +  +A+L    E  FIG  +G M      M K   A  ++++  E+
Sbjct:   31 PGRVNLIGEHTDYNGGYVFPGALTNGTYMVIKLRD--DGEYHLRSAN----FDTSVVFRNSDLRFDPK-DDWGNY----PKGIIAELAKLGVDL---PGATIYFYGNIPNGAGLSSSASIGMVTAYGLTQCSGIDIDRVTLAKLCQRMENDFIGVSTGLMDQFAVGMGKKDHALFLNTSSLEY 199          
The following BLAST results are available for this feature:
BLAST of EY711571 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 122
Match NameE-valueIdentityDescription
GAL1_LACBA4.567e-1128.78Galactokinase OS=Lactobacillus brevis (strain ATCC... [more]
GAL1_BACHD4.567e-1130.60Galactokinase OS=Bacillus halodurans GN=galK PE=3 ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-702-009-C04-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY711571 ID=EY711571; Name=EY711571; organism=Citrus sinensis; type=EST; length=931bp
CCACGCGTCCGGGCGAGGCACGAAGATTACCAGTGCCGACTTTTTGGTCA
CTGAAGGCAGTGTACGGAGAAGGATTGCAGCTGGAAGAGGCTGAACGTCG
TTTCGATAACTTGAATTCAAAGTTCATTCAAGTCTTTGCTCAGCCTCCCG
ATGTCTACGCGCGATGTCCAGGGAGAGTGAACTTGATTGGGGAGCATATT
GATTATGAAGGATATTCTGTACTGCCAATGGCGATTCGGCAAGACACAAT
CGTGGCAATAAGGAAGCACGATTCAAAAGAGGCTGAAAAGGTTCTTAAAA
TAGCTAATGTTAGTGACAAGTACAATATGTGTACTTATCCTGCTGAACCT
GATCAGGAAATTGACATAAAGCATCATCAATGGGGCCACTATTTCATTTG
TGGATATAAAGCTTTTTATGAATATGTTAAAGCTAAAGGATTGGATGTTG
GTCCACCGGTTGGACTTGATATTCTTGTTGATGGCACGGTTCCAACAGGT
TCTGGGCTATCCAGCTCCACAGCATTTGTTTGCTCTTCAACGGTTGCTCT
TATGGCTGCTTTCGGCGTGGAAGTTCCAAAGAAAGAGATTGCGCAACTTA
CATGTGAATGTGAACAATTTATTGGAACACAGTCTGGTGGAATGGNACAN
NGCATCTCTATCATGGCCAAATCTGGGNTTGCTGAGCTGATTGATTCAAC
CCTATTCGAACACTGATGTGCAACTTCCTGCTGGNAGTACTTTGGTGGTA
GCCCATTCTTGGCAGATCTCTNGAGGCTGNTACTGCTGCTTCAAATTAAC
ATACAAAGTGNTGAATGCCNNATTGCTGCTATGTACTTGCATAAAGCTTG
GATGAACCCCAGGAGCATATCAAAGTCAAACTCTTCTGATGTGAAGGNTG
GGTGGTGCATTTTGCTGAAAATGGGTCTCTG
back to top