EY711538

Overview
NameEY711538
Unique NameEY711538
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length759
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY711538 vs. ExPASy Swiss-Prot
Match: MTNA_PELPD (Methylthioribose-1-phosphate isomerase OS=Pelobacter propionicus (strain DSM 2379) GN=mtnA PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.713e-21
Identity = 53/91 (58.24%), Postives = 69/91 (75.82%), Query Frame = 3
Query:   15 TANKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKELLCSRGGLGEQVAASGISVWNPAFDVTPANLITGIITEKGVV 287
            TANKIGTYS+A+ AK +NI FYVAAP++++DL+L  G +I IEER A+E+ C R   G  +A +G+ V NPAFDVTPA  I+ IITE G+V
Sbjct:  245 TANKIGTYSVAVLAKENNIPFYVAAPISTLDLSLCDGGKIPIEERPAEEVTCIR---GVDIAPAGVRVRNPAFDVTPARYISAIITENGIV 332          
BLAST of EY711538 vs. ExPASy Swiss-Prot
Match: MTNA_THENN (Methylthioribose-1-phosphate isomerase OS=Thermotoga neapolitana (strain ATCC 49049 / DSM 4359 / NS-E) GN=mtnA PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 3.544e-21
Identity = 55/92 (59.78%), Postives = 69/92 (75.00%), Query Frame = 3
Query:   15 TANKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKELL-CSRGGLGEQVAASGISVWNPAFDVTPANLITGIITEKGVV 287
            TANKIGTYSLA+ AK +N+ FYVAAP+++ID T+ SG EI IEER A+E+  C     G ++A  G+ V NPAFDVT  +LIT IITEKGV+
Sbjct:  242 TANKIGTYSLAVLAKRNNVPFYVAAPISTIDPTIKSGDEIPIEERRAEEVTHCG----GNRIAPEGVKVLNPAFDVTENSLITAIITEKGVI 329          
BLAST of EY711538 vs. ExPASy Swiss-Prot
Match: MTNA_SYNP2 (Methylthioribose-1-phosphate isomerase OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=mtnA PE=3 SV=2)

HSP 1 Score: 101.679 bits (252), Expect = 4.628e-21
Identity = 52/91 (57.14%), Postives = 69/91 (75.82%), Query Frame = 3
Query:   18 ANKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKELLCSRGGLGE-QVAASGISVWNPAFDVTPANLITGIITEKGVV 287
            ANKIGTYSLA+ AK HN+ F+VAAPL+++D +LS G++I IEER  KE+      +G+ ++   G+  +NPAFDVTPA+LIT IITEKG V
Sbjct:  250 ANKIGTYSLAIVAKAHNVPFFVAAPLSTVDFSLSDGKQIPIEERDPKEVY----QIGDTRICPEGVQFYNPAFDVTPAHLITAIITEKGAV 336          
BLAST of EY711538 vs. ExPASy Swiss-Prot
Match: MTNA2_BACCZ (Methylthioribose-1-phosphate isomerase 2 OS=Bacillus cereus (strain ZK / E33L) GN=mtnA2 PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 4.628e-21
Identity = 57/110 (51.82%), Postives = 75/110 (68.18%), Query Frame = 3
Query:   15 TANKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKELLCSRGGLGEQVAASGISVWNPAFDVTPANLITGIITEKGVVTKAGADDAFDIKDFIQKTA 344
            TANKIGT +LA+ AK+ +I FYVAAPL++ D+T  +G EIVIEER   E+       G+QVA  G +V+NPAFDVTP  LITGIITE+G++     D   +I    +KT+
Sbjct:  248 TANKIGTMNLAILAKYFDIPFYVAAPLSTFDITKQTGAEIVIEERDETEVTKI---FGKQVAPVGTTVYNPAFDVTPNELITGIITEQGIIR---GDYKREIASLFEKTS 351          
BLAST of EY711538 vs. ExPASy Swiss-Prot
Match: MTNA_GEOSM (Methylthioribose-1-phosphate isomerase OS=Geobacter sp. (strain M21) GN=mtnA PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 6.045e-21
Identity = 54/91 (59.34%), Postives = 70/91 (76.92%), Query Frame = 3
Query:   15 TANKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKELLCSRGGLGEQVAASGISVWNPAFDVTPANLITGIITEKGVV 287
            TANKIGTYS+A+ AK + I FYVAAP++++DL L++G  I IEER+++E+   +   G Q+A  G+ V NPAFDVTPA  ITGIITEKGVV
Sbjct:  245 TANKIGTYSVAVLAKENRIPFYVAAPISTLDLKLANGDLIPIEERASEEVTQIK---GIQIAPEGVKVRNPAFDVTPARYITGIITEKGVV 332          
BLAST of EY711538 vs. ExPASy Swiss-Prot
Match: MTNA_GEOBB (Methylthioribose-1-phosphate isomerase OS=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) GN=mtnA PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 6.045e-21
Identity = 54/91 (59.34%), Postives = 70/91 (76.92%), Query Frame = 3
Query:   15 TANKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKELLCSRGGLGEQVAASGISVWNPAFDVTPANLITGIITEKGVV 287
            TANKIGTYS+A+ AK + I FYVAAP++++DL L++G  I IEER+++E+   +   G Q+A  G+ V NPAFDVTPA  ITGIITEKGVV
Sbjct:  245 TANKIGTYSVAVLAKENRIPFYVAAPISTLDLKLANGDLIPIEERASEEVTQIK---GIQIAPEGVKVRNPAFDVTPARYITGIITEKGVV 332          
BLAST of EY711538 vs. ExPASy Swiss-Prot
Match: MTNA_DEHE1 (Methylthioribose-1-phosphate isomerase OS=Dehalococcoides ethenogenes (strain 195) GN=mtnA PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 7.894e-21
Identity = 52/93 (55.91%), Postives = 68/93 (73.12%), Query Frame = 3
Query:   15 TANKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKELLCSRGGLGEQVAASGISVWNPAFDVTPANLITGIITEKGVVTK 293
            TANKIGTYSLA+ A  H I FYVAAP ++ D ++ SG++IVIEER  +E+   R   G+++A   I+V NPAFDVTPANLIT  ITE G++ +
Sbjct:  241 TANKIGTYSLAVLALAHGIPFYVAAPSSTFDKSIESGRDIVIEERKPEEITQIR---GQRIAPENIAVANPAFDVTPANLITAFITENGIIRR 330          
BLAST of EY711538 vs. ExPASy Swiss-Prot
Match: MTNA_THESQ (Methylthioribose-1-phosphate isomerase OS=Thermotoga sp. (strain RQ2) GN=mtnA PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.031e-20
Identity = 55/92 (59.78%), Postives = 68/92 (73.91%), Query Frame = 3
Query:   15 TANKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKELL-CSRGGLGEQVAASGISVWNPAFDVTPANLITGIITEKGVV 287
            TANKIGTYSLA+ AK +NI FYVAAP+++ID T+ SG+EI IEER  +E+  C     G ++A  G+ V NPAFDVT   LIT IITEKGV+
Sbjct:  242 TANKIGTYSLAVLAKRNNIPFYVAAPVSTIDPTIKSGEEIPIEERRPEEVTHCG----GNRIAPEGVKVLNPAFDVTENTLITAIITEKGVI 329          
BLAST of EY711538 vs. ExPASy Swiss-Prot
Match: MTNA_THEP1 (Methylthioribose-1-phosphate isomerase OS=Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) GN=mtnA PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.031e-20
Identity = 55/92 (59.78%), Postives = 68/92 (73.91%), Query Frame = 3
Query:   15 TANKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKELL-CSRGGLGEQVAASGISVWNPAFDVTPANLITGIITEKGVV 287
            TANKIGTYSLA+ AK +NI FYVAAP+++ID T+ SG+EI IEER  +E+  C     G ++A  G+ V NPAFDVT   LIT IITEKGV+
Sbjct:  242 TANKIGTYSLAVLAKRNNIPFYVAAPVSTIDPTIKSGEEIPIEERRPEEVTHCG----GNRIAPEGVKVLNPAFDVTENTLITAIITEKGVI 329          
BLAST of EY711538 vs. ExPASy Swiss-Prot
Match: MTNA_GEOUR (Methylthioribose-1-phosphate isomerase OS=Geobacter uraniireducens (strain Rf4) GN=mtnA PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.031e-20
Identity = 54/91 (59.34%), Postives = 69/91 (75.82%), Query Frame = 3
Query:   15 TANKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKELLCSRGGLGEQVAASGISVWNPAFDVTPANLITGIITEKGVV 287
            TANKIGTYS+A+ AK + I FYVAAP++++DL+L SG++I IEER ++E+   +   G  VA  G+ V NPAFDVTPA  I GIITEKGVV
Sbjct:  245 TANKIGTYSVAVLAKENKIPFYVAAPVSTLDLSLKSGEDIPIEERHSREVTHLQ---GLPVAPEGVKVRNPAFDVTPARYIAGIITEKGVV 332          
The following BLAST results are available for this feature:
BLAST of EY711538 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 206
Match NameE-valueIdentityDescription
MTNA_PELPD2.713e-2158.24Methylthioribose-1-phosphate isomerase OS=Pelobact... [more]
MTNA_THENN3.544e-2159.78Methylthioribose-1-phosphate isomerase OS=Thermoto... [more]
MTNA_SYNP24.628e-2157.14Methylthioribose-1-phosphate isomerase OS=Synechoc... [more]
MTNA2_BACCZ4.628e-2151.82Methylthioribose-1-phosphate isomerase 2 OS=Bacill... [more]
MTNA_GEOSM6.045e-2159.34Methylthioribose-1-phosphate isomerase OS=Geobacte... [more]
MTNA_GEOBB6.045e-2159.34Methylthioribose-1-phosphate isomerase OS=Geobacte... [more]
MTNA_DEHE17.894e-2155.91Methylthioribose-1-phosphate isomerase OS=Dehaloco... [more]
MTNA_THESQ1.031e-2059.78Methylthioribose-1-phosphate isomerase OS=Thermoto... [more]
MTNA_THEP11.031e-2059.78Methylthioribose-1-phosphate isomerase OS=Thermoto... [more]
MTNA_GEOUR1.031e-2059.34Methylthioribose-1-phosphate isomerase OS=Geobacte... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-008-H03-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY711538 ID=EY711538; Name=EY711538; organism=Citrus sinensis; type=EST; length=759bp
ACCCACGCGTCCGCACTGCTAACAAGATTGGAACCTACAGCCTTGCATTA
TGTGCAAAGTTTCATAATATTCTGTTTTATGTGGCTGCTCCACTGACGTC
AATTGATTTAACCCTTTCTTCTGGACAAGAGATTGTCATAGAGGAGAGGT
CTGCTAAAGAATTGTTGTGCTCTCGAGGAGGACTTGGTGAACAAGTAGCT
GCATCTGGAATCTCTGTCTGGAATCCGGCTTTTGATGTTACCCCAGCTAA
TTTGATCACTGGAATTATAACAGAAAAGGGTGTCGTTACAAAGGCAGGTG
CTGATGATGCTTTTGACATAAAGGATTTCATACAAAAGACAGCCTGAGGC
TCTGATGCAAAAGAAGGTGATTTTTAACCGGATGAAGTGTACCCTTGTAA
ATTTAAACAAGAAATGAAGTTCTCCAGCCTGGGCGAAGATCTGTGGGAAG
GAACATTGTATCTCGCTGCTTTAGAGTCCCTTTTGTTGTGATGATTGCAG
GCATGTATTTTTTGGTTAATCTGGCAGCTAAGGGCAAATATTATAATTAT
TTGACGTAAAAATAGAACTCATATAGGACAAGTTCAAATTAGAAAGTGGA
TCGGAGAGTACCAGTCGTGTGTATTTAATCCTCGCTTTTTTATTTCTTCT
ANGGATATTATTGTTTGAGTACTTTAAAATTTATATATATCTAATAATTA
TAAAAATCATTATAGTCTATCAGGACTATATTTATTTACAAAAAAAAAAA
AAAAAAAAA
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