EY711538

Overview
NameEY711538
Unique NameEY711538
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length759
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY711538 vs. ExPASy Swiss-Prot
Match: MTNA_GEOSW (Methylthioribose-1-phosphate isomerase OS=Geobacillus sp. (strain WCH70) GN=mtnA PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.031e-20
Identity = 53/91 (58.24%), Postives = 68/91 (74.73%), Query Frame = 3
Query:   15 TANKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKELLCSRGGLGEQVAASGISVWNPAFDVTPANLITGIITEKGVV 287
            TANKIGT+ LAL AK   I FYVAAPL++IDL   +G+EI IEER+ +E+       G ++A  G++V+NPAFDVTP +LIT IITEKG+V
Sbjct:  248 TANKIGTFGLALLAKAFGIPFYVAAPLSTIDLATKTGEEIPIEERNPEEVTHI---AGTRIAPEGVNVYNPAFDVTPHDLITAIITEKGIV 335          
BLAST of EY711538 vs. ExPASy Swiss-Prot
Match: MTNA_THEPX (Methylthioribose-1-phosphate isomerase OS=Thermoanaerobacter sp. (strain X514) GN=mtnA PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.347e-20
Identity = 51/103 (49.51%), Postives = 71/103 (68.93%), Query Frame = 3
Query:   15 TANKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKELLCSRGGLGEQVAASGISVWNPAFDVTPANLITGIITEKGVVTKAGADDAFDIK 323
            TANKIGT+ L++ AK +N+ FYV AP ++ID  + SG+EI+IEERS +E+       G ++A  GI V+NPAFDVTP   ITGIITEKG++     ++   +K
Sbjct:  246 TANKIGTFMLSVIAKVYNVPFYVVAPTSTIDFEIESGKEIIIEERSPEEVTHIN---GVRIAPEGIEVYNPAFDVTPHENITGIITEKGIIKPPYKENILKLK 345          
BLAST of EY711538 vs. ExPASy Swiss-Prot
Match: MTNA_THEP3 (Methylthioribose-1-phosphate isomerase OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=mtnA PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.347e-20
Identity = 51/103 (49.51%), Postives = 71/103 (68.93%), Query Frame = 3
Query:   15 TANKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKELLCSRGGLGEQVAASGISVWNPAFDVTPANLITGIITEKGVVTKAGADDAFDIK 323
            TANKIGT+ L++ AK +N+ FYV AP ++ID  + SG+EI+IEERS +E+       G ++A  GI V+NPAFDVTP   ITGIITEKG++     ++   +K
Sbjct:  246 TANKIGTFMLSVIAKVYNVPFYVVAPTSTIDFEIESGKEIIIEERSPEEVTHIN---GVRIAPEGIEVYNPAFDVTPHENITGIITEKGIIKPPYKENILKLK 345          
BLAST of EY711538 vs. ExPASy Swiss-Prot
Match: MTNA_THEMA (Methylthioribose-1-phosphate isomerase OS=Thermotoga maritima GN=mtnA PE=1 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.347e-20
Identity = 55/92 (59.78%), Postives = 68/92 (73.91%), Query Frame = 3
Query:   15 TANKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKELL-CSRGGLGEQVAASGISVWNPAFDVTPANLITGIITEKGVV 287
            TANKIGTYSLA+ AK +NI FYVAAP+++ID T+ SG+EI IEER  +E+  C     G ++A  G+ V NPAFDVT   LIT IITEKGV+
Sbjct:  242 TANKIGTYSLAVLAKRNNIPFYVAAPVSTIDPTIRSGEEIPIEERRPEEVTHCG----GNRIAPEGVKVLNPAFDVTENTLITAIITEKGVI 329          
BLAST of EY711538 vs. ExPASy Swiss-Prot
Match: MTNA_SYNAS (Methylthioribose-1-phosphate isomerase OS=Syntrophus aciditrophicus (strain SB) GN=mtnA PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.347e-20
Identity = 52/90 (57.78%), Postives = 67/90 (74.44%), Query Frame = 3
Query:   15 TANKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKELLCSRGGLGEQVAASGISVWNPAFDVTPANLITGIITEKGV 284
            TANKIGTY+LA+ A  H++  YVAAPL++ID  LSSG EI IEER A+E+L  R   G  +A +G+ V+NPAFDVTP + I+ IITE G+
Sbjct:  264 TANKIGTYTLAVLAAAHSVPLYVAAPLSTIDRKLSSGNEIPIEERPAEEILTIR---GVPIAPAGVEVYNPAFDVTPGHYISAIITEAGI 350          
BLAST of EY711538 vs. ExPASy Swiss-Prot
Match: MTNA_GEOSF (Methylthioribose-1-phosphate isomerase OS=Geobacter sp. (strain FRC-32) GN=mtnA PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.347e-20
Identity = 56/91 (61.54%), Postives = 67/91 (73.63%), Query Frame = 3
Query:   15 TANKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKELLCSRGGLGEQVAASGISVWNPAFDVTPANLITGIITEKGVV 287
            TANKIGTYS+A+ AK + I FYVAAP++++DL+L SG EI IEER A E+   +   G  VA  G+ V NPAFDVTPA  I GIITEKGVV
Sbjct:  245 TANKIGTYSVAVLAKENKIPFYVAAPVSTLDLSLKSGDEIPIEERHACEVTHLQ---GLPVAPEGVKVRNPAFDVTPAKYIAGIITEKGVV 332          
BLAST of EY711538 vs. ExPASy Swiss-Prot
Match: MTNA_BACC1 (Methylthioribose-1-phosphate isomerase OS=Bacillus cereus (strain ATCC 10987) GN=mtnA PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.347e-20
Identity = 56/110 (50.91%), Postives = 73/110 (66.36%), Query Frame = 3
Query:   15 TANKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKELLCSRGGLGEQVAASGISVWNPAFDVTPANLITGIITEKGVVTKAGADDAFDIKDFIQKTA 344
            TANKIGT +LA+ AK+  I FYVAAPL++ D+T  +G EIVIEER   E+       G+QV   G +V+NPAFDVTP  LITGIITE+G++     D   +I    +KT+
Sbjct:  248 TANKIGTMNLAILAKYFGIPFYVAAPLSTFDITKQTGAEIVIEERDETEVTKI---FGKQVTPVGTTVYNPAFDVTPNELITGIITERGIIR---GDYKREIASLFEKTS 351          
BLAST of EY711538 vs. ExPASy Swiss-Prot
Match: MTNA_SYNSC (Methylthioribose-1-phosphate isomerase OS=Synechococcus sp. (strain CC9605) GN=mtnA PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.759e-20
Identity = 53/90 (58.89%), Postives = 63/90 (70.00%), Query Frame = 3
Query:   18 ANKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKELLCSRGGLGEQVAASGISVWNPAFDVTPANLITGIITEKGVV 287
            ANKIGTY+LAL A+ H I FYV AP +SID     G+ I IEER A+E+   R   G  VAA G  VWNPAFD+TPA+L+TG ITE GV+
Sbjct:  234 ANKIGTYNLALVARAHGIPFYVCAPGSSIDRATVDGEAITIEERDAEEITHVR---GMDVAAPGAQVWNPAFDITPAHLVTGFITEFGVL 320          
BLAST of EY711538 vs. ExPASy Swiss-Prot
Match: MTNA_FERNB (Methylthioribose-1-phosphate isomerase OS=Fervidobacterium nodosum (strain ATCC 35602 / DSM 5306 / Rt17-B1) GN=mtnA PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.297e-20
Identity = 53/91 (58.24%), Postives = 70/91 (76.92%), Query Frame = 3
Query:   18 ANKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKELL-CSRGGLGEQVAASGISVWNPAFDVTPANLITGIITEKGVV 287
            ANKIGTY +A+ A  H I FYVAAPL++ID+++ SG+EI IEERS +E+L C     G++VA + ++V+NPAFDVT   L+T IITEKGVV
Sbjct:  248 ANKIGTYMVAVLANRHGIPFYVAAPLSTIDMSIKSGKEIPIEERSHEEVLTCG----GKRVAPNNVNVYNPAFDVTDHELVTAIITEKGVV 334          
BLAST of EY711538 vs. ExPASy Swiss-Prot
Match: MTNA_DESAP (Methylthioribose-1-phosphate isomerase OS=Desulforudis audaxviator (strain MP104C) GN=mtnA PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.297e-20
Identity = 51/90 (56.67%), Postives = 65/90 (72.22%), Query Frame = 3
Query:   18 ANKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKELLCSRGGLGEQVAASGISVWNPAFDVTPANLITGIITEKGVV 287
            ANKIGTYSLA+ A+ H I FYVA PL+++DL  + G++I IEER   EL   R   G +VA  G++VWNPAFDVTP  LIT +IT+ GV+
Sbjct:  244 ANKIGTYSLAVLARAHGIPFYVAVPLSTVDLRTAIGRDIPIEERDPAELTHFR---GRRVAPQGVAVWNPAFDVTPNELITALITDAGVL 330          
The following BLAST results are available for this feature:
BLAST of EY711538 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 206
Match NameE-valueIdentityDescription
MTNA_GEOSW1.031e-2058.24Methylthioribose-1-phosphate isomerase OS=Geobacil... [more]
MTNA_THEPX1.347e-2049.51Methylthioribose-1-phosphate isomerase OS=Thermoan... [more]
MTNA_THEP31.347e-2049.51Methylthioribose-1-phosphate isomerase OS=Thermoan... [more]
MTNA_THEMA1.347e-2059.78Methylthioribose-1-phosphate isomerase OS=Thermoto... [more]
MTNA_SYNAS1.347e-2057.78Methylthioribose-1-phosphate isomerase OS=Syntroph... [more]
MTNA_GEOSF1.347e-2061.54Methylthioribose-1-phosphate isomerase OS=Geobacte... [more]
MTNA_BACC11.347e-2050.91Methylthioribose-1-phosphate isomerase OS=Bacillus... [more]
MTNA_SYNSC1.759e-2058.89Methylthioribose-1-phosphate isomerase OS=Synechoc... [more]
MTNA_FERNB2.297e-2058.24Methylthioribose-1-phosphate isomerase OS=Fervidob... [more]
MTNA_DESAP2.297e-2056.67Methylthioribose-1-phosphate isomerase OS=Desulfor... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-702-008-H03-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY711538 ID=EY711538; Name=EY711538; organism=Citrus sinensis; type=EST; length=759bp
ACCCACGCGTCCGCACTGCTAACAAGATTGGAACCTACAGCCTTGCATTA
TGTGCAAAGTTTCATAATATTCTGTTTTATGTGGCTGCTCCACTGACGTC
AATTGATTTAACCCTTTCTTCTGGACAAGAGATTGTCATAGAGGAGAGGT
CTGCTAAAGAATTGTTGTGCTCTCGAGGAGGACTTGGTGAACAAGTAGCT
GCATCTGGAATCTCTGTCTGGAATCCGGCTTTTGATGTTACCCCAGCTAA
TTTGATCACTGGAATTATAACAGAAAAGGGTGTCGTTACAAAGGCAGGTG
CTGATGATGCTTTTGACATAAAGGATTTCATACAAAAGACAGCCTGAGGC
TCTGATGCAAAAGAAGGTGATTTTTAACCGGATGAAGTGTACCCTTGTAA
ATTTAAACAAGAAATGAAGTTCTCCAGCCTGGGCGAAGATCTGTGGGAAG
GAACATTGTATCTCGCTGCTTTAGAGTCCCTTTTGTTGTGATGATTGCAG
GCATGTATTTTTTGGTTAATCTGGCAGCTAAGGGCAAATATTATAATTAT
TTGACGTAAAAATAGAACTCATATAGGACAAGTTCAAATTAGAAAGTGGA
TCGGAGAGTACCAGTCGTGTGTATTTAATCCTCGCTTTTTTATTTCTTCT
ANGGATATTATTGTTTGAGTACTTTAAAATTTATATATATCTAATAATTA
TAAAAATCATTATAGTCTATCAGGACTATATTTATTTACAAAAAAAAAAA
AAAAAAAAA
back to top