EY711538

Overview
NameEY711538
Unique NameEY711538
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length759
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY711538 vs. ExPASy Swiss-Prot
Match: MTNA_ALHEH (Methylthioribose-1-phosphate isomerase OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=mtnA PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.540e-19
Identity = 53/96 (55.21%), Postives = 63/96 (65.62%), Query Frame = 3
Query:   15 TANKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKELLCSRGGLGE-QVAASGISVWNPAFDVTPANLITGIITEKGVVTKAG 299
            TANKIGTY+LAL  K H + F V AP ++IDL    G  I IEER  +ELL     LG+ +VAA G   WNP FDVTPA LI  ++TE+GVVT  G
Sbjct:  245 TANKIGTYALALACKAHGVKFMVVAPSSTIDLDCPGGDRIPIEERPPEELL----WLGDRRVAAEGAGAWNPVFDVTPAELIDVLVTERGVVTDFG 336          
BLAST of EY711538 vs. ExPASy Swiss-Prot
Match: EI2B1_PYRFU (Putative translation initiation factor eIF-2B subunit 1 OS=Pyrococcus furiosus GN=PF1349 PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.540e-19
Identity = 52/90 (57.78%), Postives = 65/90 (72.22%), Query Frame = 3
Query:   18 ANKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKELLCSRGGLGEQVAASGISVWNPAFDVTPANLITGIITEKGVV 287
            ANKIGTY LA+ AK H I F+  APL+SID++LSSG+EI IEERS +E+L   G       A  + V+NPAFDVTP   +TGIIT++GVV
Sbjct:  256 ANKIGTYMLAVLAKEHGIPFFTVAPLSSIDMSLSSGKEIPIEERSPEEVLTCGGCR----IAPDVPVYNPAFDVTPHKYLTGIITDRGVV 341          
BLAST of EY711538 vs. ExPASy Swiss-Prot
Match: MTNA_BACCN (Methylthioribose-1-phosphate isomerase OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=mtnA PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 3.317e-19
Identity = 47/91 (51.65%), Postives = 65/91 (71.43%), Query Frame = 3
Query:   15 TANKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKELLCSRGGLGEQVAASGISVWNPAFDVTPANLITGIITEKGVV 287
            TANK+GT +LA+ AK + I FYVAAPL++ D    +G EI+IEER   E+       G+Q+A +GI ++NPAFD+TP   I+GIITEKG++
Sbjct:  248 TANKVGTLNLAILAKHYQIPFYVAAPLSTFDTKKKTGNEIIIEERDETEVTKIN---GQQIAPAGIHIYNPAFDITPHEFISGIITEKGIL 335          
BLAST of EY711538 vs. ExPASy Swiss-Prot
Match: MTNA_RHOFD (Methylthioribose-1-phosphate isomerase OS=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) GN=mtnA PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 4.332e-19
Identity = 51/90 (56.67%), Postives = 65/90 (72.22%), Query Frame = 3
Query:   18 ANKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKELLCSRGGLGEQVAASGISVWNPAFDVTPANLITGIITEKGVV 287
            ANKIGTY +A+ A+ HNI FYVA PL++IDL +  G  I IEER+A+E+    G    Q AA G+ V NPAFDVTPA L+T +ITE+GV+
Sbjct:  254 ANKIGTYMVAVLAQRHNIPFYVACPLSTIDLAIPDGAAIPIEERAAEEV---TGFRDCQWAAKGVQVRNPAFDVTPAELVTALITERGVL 340          
BLAST of EY711538 vs. ExPASy Swiss-Prot
Match: MTNA_PELCD (Methylthioribose-1-phosphate isomerase OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=mtnA PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 4.332e-19
Identity = 53/91 (58.24%), Postives = 64/91 (70.33%), Query Frame = 3
Query:   18 ANKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKELL-CSRGGLGEQVAASGISVWNPAFDVTPANLITGIITEKGVV 287
            ANKIGTYS+A+ AK H + FYVAAPL++IDL +  G  I IEER   E+  C       ++A  GI+V NPAFDVTPA LIT IITE+GVV
Sbjct:  246 ANKIGTYSVAVLAKEHGLPFYVAAPLSTIDLKIPDGDHIPIEERDTSEVTHCG----PTRLAPEGINVRNPAFDVTPAGLITAIITERGVV 332          
BLAST of EY711538 vs. ExPASy Swiss-Prot
Match: MTNA_MICAN (Methylthioribose-1-phosphate isomerase OS=Microcystis aeruginosa (strain NIES-843) GN=mtnA PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 4.332e-19
Identity = 54/101 (53.47%), Postives = 65/101 (64.36%), Query Frame = 3
Query:   15 TANKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKEL-------LCSRGGLGEQVAASGISVWNPAFDVTPANLITGIITEKGVVTKA 296
            TANKIGTYSLA+ AK HN+ FYVAAPL+++D +L  G  I IE+R   E+       LC R           ++ +NPAFDVTPA LIT IITEKG VT A
Sbjct:  255 TANKIGTYSLAVVAKAHNLPFYVAAPLSTVDFSLKDGTGIPIEQRDRAEIYQVGTTTLCPR----------DVNFYNPAFDVTPAALITAIITEKGAVTPA 345          
BLAST of EY711538 vs. ExPASy Swiss-Prot
Match: MTNA_NOSP7 (Methylthioribose-1-phosphate isomerase OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=mtnA PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 5.658e-19
Identity = 49/92 (53.26%), Postives = 64/92 (69.57%), Query Frame = 3
Query:   15 TANKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKELLCSRGGLGEQV-AASGISVWNPAFDVTPANLITGIITEKGVV 287
            TANKIGTYS+A+ AK HNI F+VAAPL+++D  L+ G +I IEER   E+      +G+ +    G+  +NPAFDVTPA LIT IITE G +
Sbjct:  252 TANKIGTYSVAIAAKAHNIPFFVAAPLSTVDFELADGSKIPIEERDPTEIY----QVGDTILTPEGVDFYNPAFDVTPAELITAIITENGAI 339          
BLAST of EY711538 vs. ExPASy Swiss-Prot
Match: MTNA_GEOTN (Methylthioribose-1-phosphate isomerase OS=Geobacillus thermodenitrificans (strain NG80-2) GN=mtnA PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 5.658e-19
Identity = 51/91 (56.04%), Postives = 64/91 (70.33%), Query Frame = 3
Query:   15 TANKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKELLCSRGGLGEQVAASGISVWNPAFDVTPANLITGIITEKGVV 287
            TANKIGT+ LAL A+   I FYVAAPL++IDL   +G +I IEER   E+       G ++A  G++V+NPAFDVTP  LIT IITEKG+V
Sbjct:  247 TANKIGTFGLALLAQSFGIPFYVAAPLSTIDLATKTGADIPIEERHPDEVTHLN---GVRIAPEGVNVYNPAFDVTPNELITAIITEKGIV 334          
BLAST of EY711538 vs. ExPASy Swiss-Prot
Match: MTNA_EXIS2 (Methylthioribose-1-phosphate isomerase OS=Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15) GN=mtnA PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 5.658e-19
Identity = 52/91 (57.14%), Postives = 64/91 (70.33%), Query Frame = 3
Query:   15 TANKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKELLCSRGGLGEQVAASGISVWNPAFDVTPANLITGIITEKGVV 287
            TANKIGT+ LAL A+   I FYVAAPL++ D T  SG EI IEER A+E+       G+  A +G+ V+NPAFDVTP +LIT IITE GV+
Sbjct:  244 TANKIGTFQLALLARAFGIPFYVAAPLSTFDFTSLSGDEIEIEERDAREVTQL---AGKATAPAGVPVFNPAFDVTPHDLITAIITELGVI 331          
BLAST of EY711538 vs. ExPASy Swiss-Prot
Match: MTNA_CHLTE (Methylthioribose-1-phosphate isomerase OS=Chlorobium tepidum GN=mtnA PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 5.658e-19
Identity = 51/91 (56.04%), Postives = 64/91 (70.33%), Query Frame = 3
Query:   15 TANKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKELLCSRGGLGEQVAASGISVWNPAFDVTPANLITGIITEKGVV 287
            TANKIGTY+ A+ A++H + FY+AAP+++ID+T++ G EI IEER+  EL   R   G QVA     V N AFDVTP  LI GIITEKG V
Sbjct:  253 TANKIGTYAHAISARYHGLPFYIAAPVSTIDITMAEGSEIPIEERNPDEL---RKIFGTQVATPTTPVVNFAFDVTPGTLIRGIITEKGAV 340          
The following BLAST results are available for this feature:
BLAST of EY711538 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 206
Match NameE-valueIdentityDescription
MTNA_ALHEH2.540e-1955.21Methylthioribose-1-phosphate isomerase OS=Alkalili... [more]
EI2B1_PYRFU2.540e-1957.78Putative translation initiation factor eIF-2B subu... [more]
MTNA_BACCN3.317e-1951.65Methylthioribose-1-phosphate isomerase OS=Bacillus... [more]
MTNA_RHOFD4.332e-1956.67Methylthioribose-1-phosphate isomerase OS=Rhodofer... [more]
MTNA_PELCD4.332e-1958.24Methylthioribose-1-phosphate isomerase OS=Pelobact... [more]
MTNA_MICAN4.332e-1953.47Methylthioribose-1-phosphate isomerase OS=Microcys... [more]
MTNA_NOSP75.658e-1953.26Methylthioribose-1-phosphate isomerase OS=Nostoc p... [more]
MTNA_GEOTN5.658e-1956.04Methylthioribose-1-phosphate isomerase OS=Geobacil... [more]
MTNA_EXIS25.658e-1957.14Methylthioribose-1-phosphate isomerase OS=Exiguoba... [more]
MTNA_CHLTE5.658e-1956.04Methylthioribose-1-phosphate isomerase OS=Chlorobi... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-008-H03-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY711538 ID=EY711538; Name=EY711538; organism=Citrus sinensis; type=EST; length=759bp
ACCCACGCGTCCGCACTGCTAACAAGATTGGAACCTACAGCCTTGCATTA
TGTGCAAAGTTTCATAATATTCTGTTTTATGTGGCTGCTCCACTGACGTC
AATTGATTTAACCCTTTCTTCTGGACAAGAGATTGTCATAGAGGAGAGGT
CTGCTAAAGAATTGTTGTGCTCTCGAGGAGGACTTGGTGAACAAGTAGCT
GCATCTGGAATCTCTGTCTGGAATCCGGCTTTTGATGTTACCCCAGCTAA
TTTGATCACTGGAATTATAACAGAAAAGGGTGTCGTTACAAAGGCAGGTG
CTGATGATGCTTTTGACATAAAGGATTTCATACAAAAGACAGCCTGAGGC
TCTGATGCAAAAGAAGGTGATTTTTAACCGGATGAAGTGTACCCTTGTAA
ATTTAAACAAGAAATGAAGTTCTCCAGCCTGGGCGAAGATCTGTGGGAAG
GAACATTGTATCTCGCTGCTTTAGAGTCCCTTTTGTTGTGATGATTGCAG
GCATGTATTTTTTGGTTAATCTGGCAGCTAAGGGCAAATATTATAATTAT
TTGACGTAAAAATAGAACTCATATAGGACAAGTTCAAATTAGAAAGTGGA
TCGGAGAGTACCAGTCGTGTGTATTTAATCCTCGCTTTTTTATTTCTTCT
ANGGATATTATTGTTTGAGTACTTTAAAATTTATATATATCTAATAATTA
TAAAAATCATTATAGTCTATCAGGACTATATTTATTTACAAAAAAAAAAA
AAAAAAAAA
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