EY711538

Overview
NameEY711538
Unique NameEY711538
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length759
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY711538 vs. ExPASy Swiss-Prot
Match: MTNA_BACLD (Methylthioribose-1-phosphate isomerase OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=mtnA PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 5.658e-19
Identity = 48/92 (52.17%), Postives = 67/92 (72.83%), Query Frame = 3
Query:   15 TANKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKELLCSRGGLGEQVAASGISVWNPAFDVTPANLITGIITEKGVVT 290
            TANKIGT+ LA+ AK   I F++AAPL++ D+++S G +I IEER   E+   R   G Q+A   + V+NPAFD+TP +LI+GIITEKG++T
Sbjct:  248 TANKIGTFGLAILAKAFQIPFFIAAPLSTFDVSISCGDDIPIEERDPDEV---RRINGTQIAPQEVPVFNPAFDITPHDLISGIITEKGIIT 336          
BLAST of EY711538 vs. ExPASy Swiss-Prot
Match: MTNA_PSEU5 (Methylthioribose-1-phosphate isomerase OS=Pseudomonas stutzeri (strain A1501) GN=mtnA PE=3 SV=2)

HSP 1 Score: 94.3597 bits (233), Expect = 7.389e-19
Identity = 51/95 (53.68%), Postives = 64/95 (67.37%), Query Frame = 3
Query:   18 ANKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKELLCSRGGLGEQVAASGISVWNPAFDVTPANLITGIITEKGVVTKAGA 302
            ANKIGTY LA+ A  H + F V AP ++ID+ L SG EI++EER+  ELL   G    Q  A+ I V+NP FDVTPA+LI  I+TEKGVV +  A
Sbjct:  255 ANKIGTYQLAVLAMHHGVRFMVVAPSSTIDMALESGDEILLEERAGSELLEVNG----QRFAAEIEVFNPVFDVTPADLIDAIVTEKGVVERPNA 345          
BLAST of EY711538 vs. ExPASy Swiss-Prot
Match: MTNA_HERA2 (Methylthioribose-1-phosphate isomerase OS=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) GN=mtnA PE=3 SV=2)

HSP 1 Score: 94.3597 bits (233), Expect = 7.389e-19
Identity = 51/90 (56.67%), Postives = 67/90 (74.44%), Query Frame = 3
Query:   18 ANKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKELLCSRGGLGEQ-VAASGISVWNPAFDVTPANLITGIITEKGV 284
            ANKIGTY LA+ AK HNI  YVAAP ++IDL  + G  I IE+RS +E+      +G+Q +AA+GI V +PAFDVTPA+L+T IITE+G+
Sbjct:  247 ANKIGTYGLAVLAKAHNIPLYVAAPTSTIDLQTADGAAIPIEQRSTQEVT----HIGQQAIAAAGIKVAHPAFDVTPAHLVTAIITEQGI 332          
BLAST of EY711538 vs. ExPASy Swiss-Prot
Match: MTNA_NATTJ (Methylthioribose-1-phosphate isomerase OS=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) GN=mtnA PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 9.650e-19
Identity = 48/91 (52.75%), Postives = 66/91 (72.53%), Query Frame = 3
Query:   15 TANKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKELLCSRGGLGEQVAASGISVWNPAFDVTPANLITGIITEKGVV 287
            TANKIGT+ L++ AK + + FYV AP+++ID    +G +I IEERS+KE+       G +VA + I V+NPAFD+TPA  ITGIITEKG++
Sbjct:  248 TANKIGTFMLSILAKKYKVPFYVVAPVSTIDFQAKNGDDITIEERSSKEVTEID---GVRVAPTDIQVYNPAFDITPAENITGIITEKGII 335          
BLAST of EY711538 vs. ExPASy Swiss-Prot
Match: MTNA_KLEP7 (Methylthioribose-1-phosphate isomerase OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=mtnA PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 9.650e-19
Identity = 51/94 (54.26%), Postives = 65/94 (69.15%), Query Frame = 3
Query:   18 ANKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKELLCSRGGLGE-QVAASGISVWNPAFDVTPANLITGIITEKGVVTKA 296
            ANKIGTYSLA+ A +H I FYVAAP T++D    +G  I IE+R+A E+    G  G  Q A +G +V+NPAFDVTPA LI+G + + GVVT A
Sbjct:  237 ANKIGTYSLAVLAHYHQIPFYVAAPQTTLDRYCPNGAAIPIEQRAAAEVTGVAGSFGAVQWAPTGAAVYNPAFDVTPAGLISGWVLDSGVVTPA 330          
BLAST of EY711538 vs. ExPASy Swiss-Prot
Match: MTNA_HELMI (Methylthioribose-1-phosphate isomerase OS=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) GN=mtnA PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 9.650e-19
Identity = 49/90 (54.44%), Postives = 65/90 (72.22%), Query Frame = 3
Query:   18 ANKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKELLCSRGGLGEQVAA-SGISVWNPAFDVTPANLITGIITEKGV 284
            ANKIGTY +AL AK H I FYVAAP+++ DL+L SG +I IEER  +E+      +G+ + A  G+ V+NPAFDVTPA L+T  IT++GV
Sbjct:  244 ANKIGTYGVALAAKAHGIPFYVAAPVSTFDLSLESGLQIPIEERDTEEV----RRVGDSITAPPGVPVYNPAFDVTPAELVTAFITDRGV 329          
BLAST of EY711538 vs. ExPASy Swiss-Prot
Match: MTNA_ENTS8 (Methylthioribose-1-phosphate isomerase OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=mtnA PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 9.650e-19
Identity = 51/92 (55.43%), Postives = 63/92 (68.48%), Query Frame = 3
Query:   18 ANKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKELLCSRGGLGE-QVAASGISVWNPAFDVTPANLITGIITEKGVVT 290
            ANKIGTYSLA+ AKFHN+ FYVAAP T++D    +G  I IE+R+A E+    G  G  Q A     V+NPAFDVTPA LI+G + + GVVT
Sbjct:  237 ANKIGTYSLAVLAKFHNVPFYVAAPQTTLDPACPNGAAIPIEQRAAAEVTGVAGSFGAVQWAPEDARVYNPAFDVTPAALISGWVLDSGVVT 328          
BLAST of EY711538 vs. ExPASy Swiss-Prot
Match: MTNA_THET8 (Methylthioribose-1-phosphate isomerase OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=mtnA PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.260e-18
Identity = 48/90 (53.33%), Postives = 64/90 (71.11%), Query Frame = 3
Query:   18 ANKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKELLCSRGGLGEQVAASGISVWNPAFDVTPANLITGIITEKGVV 287
            ANK+GTY+LA+ A  H I FY A PL+S+D  L+SG+ I IEERS +E++  R   G ++A  G   ++PAFDVTP   +TGIITEKGV+
Sbjct:  229 ANKVGTYALAVLAHHHGIPFYAALPLSSVDPRLASGEGIPIEERSPEEVVAFR---GVRIAPEGFPAYHPAFDVTPHRYLTGIITEKGVL 315          
BLAST of EY711538 vs. ExPASy Swiss-Prot
Match: MTNA_THET2 (Methylthioribose-1-phosphate isomerase OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=mtnA PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.260e-18
Identity = 48/90 (53.33%), Postives = 64/90 (71.11%), Query Frame = 3
Query:   18 ANKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKELLCSRGGLGEQVAASGISVWNPAFDVTPANLITGIITEKGVV 287
            ANK+GTY+LA+ A  H I FY A PL+S+D  L+SG+ I IEERS +E++  R   G ++A  G   ++PAFDVTP   +TGIITEKGV+
Sbjct:  229 ANKVGTYALAVLAHHHGIPFYAALPLSSVDPRLASGEGIPIEERSPEEVVAFR---GVRIAPEGFPAYHPAFDVTPHRYLTGIITEKGVL 315          
BLAST of EY711538 vs. ExPASy Swiss-Prot
Match: MTNA_DESDG (Methylthioribose-1-phosphate isomerase OS=Desulfovibrio desulfuricans (strain G20) GN=mtnA PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.260e-18
Identity = 51/91 (56.04%), Postives = 68/91 (74.73%), Query Frame = 3
Query:   18 ANKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKELLCSRGGLGE-QVAASGISVWNPAFDVTPANLITGIITEKGVV 287
            ANKIGTYS+AL A+ H I FYVAAPL++ID    SG++I IEER A+E+      +GE ++   G+ V+N AFDVTPA+LI GI+TE+GV+
Sbjct:  249 ANKIGTYSVALLAREHGIPFYVAAPLSTIDRATPSGKQIPIEERPAEEVT----HVGETRITPEGVPVYNYAFDVTPAHLIAGIVTEQGVL 335          
The following BLAST results are available for this feature:
BLAST of EY711538 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 206
Match NameE-valueIdentityDescription
MTNA_BACLD5.658e-1952.17Methylthioribose-1-phosphate isomerase OS=Bacillus... [more]
MTNA_PSEU57.389e-1953.68Methylthioribose-1-phosphate isomerase OS=Pseudomo... [more]
MTNA_HERA27.389e-1956.67Methylthioribose-1-phosphate isomerase OS=Herpetos... [more]
MTNA_NATTJ9.650e-1952.75Methylthioribose-1-phosphate isomerase OS=Natranae... [more]
MTNA_KLEP79.650e-1954.26Methylthioribose-1-phosphate isomerase OS=Klebsiel... [more]
MTNA_HELMI9.650e-1954.44Methylthioribose-1-phosphate isomerase OS=Heliobac... [more]
MTNA_ENTS89.650e-1955.43Methylthioribose-1-phosphate isomerase OS=Enteroba... [more]
MTNA_THET81.260e-1853.33Methylthioribose-1-phosphate isomerase OS=Thermus ... [more]
MTNA_THET21.260e-1853.33Methylthioribose-1-phosphate isomerase OS=Thermus ... [more]
MTNA_DESDG1.260e-1856.04Methylthioribose-1-phosphate isomerase OS=Desulfov... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-008-H03-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY711538 ID=EY711538; Name=EY711538; organism=Citrus sinensis; type=EST; length=759bp
ACCCACGCGTCCGCACTGCTAACAAGATTGGAACCTACAGCCTTGCATTA
TGTGCAAAGTTTCATAATATTCTGTTTTATGTGGCTGCTCCACTGACGTC
AATTGATTTAACCCTTTCTTCTGGACAAGAGATTGTCATAGAGGAGAGGT
CTGCTAAAGAATTGTTGTGCTCTCGAGGAGGACTTGGTGAACAAGTAGCT
GCATCTGGAATCTCTGTCTGGAATCCGGCTTTTGATGTTACCCCAGCTAA
TTTGATCACTGGAATTATAACAGAAAAGGGTGTCGTTACAAAGGCAGGTG
CTGATGATGCTTTTGACATAAAGGATTTCATACAAAAGACAGCCTGAGGC
TCTGATGCAAAAGAAGGTGATTTTTAACCGGATGAAGTGTACCCTTGTAA
ATTTAAACAAGAAATGAAGTTCTCCAGCCTGGGCGAAGATCTGTGGGAAG
GAACATTGTATCTCGCTGCTTTAGAGTCCCTTTTGTTGTGATGATTGCAG
GCATGTATTTTTTGGTTAATCTGGCAGCTAAGGGCAAATATTATAATTAT
TTGACGTAAAAATAGAACTCATATAGGACAAGTTCAAATTAGAAAGTGGA
TCGGAGAGTACCAGTCGTGTGTATTTAATCCTCGCTTTTTTATTTCTTCT
ANGGATATTATTGTTTGAGTACTTTAAAATTTATATATATCTAATAATTA
TAAAAATCATTATAGTCTATCAGGACTATATTTATTTACAAAAAAAAAAA
AAAAAAAAA
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