EY711526

Overview
NameEY711526
Unique NameEY711526
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length884
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY711526 vs. ExPASy Swiss-Prot
Match: EXP28_ORYSJ (Expansin-A28 OS=Oryza sativa subsp. japonica GN=EXPA28 PE=2 SV=2)

HSP 1 Score: 186.422 bits (472), Expect = 1.827e-46
Identity = 81/149 (54.36%), Postives = 109/149 (73.15%), Query Frame = 2
Query:    2 ATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFKVTTSDGRTVTSYNVAPASWSFGRTYSGAQ 448
            ATN C          GGWCNPP+ HFD+SQP ++ I  YRAG+VPV Y++V C R+GG+RFT++G +YF LVLITNV G+G V A+S+KGS+TGW P++RNWG NWQ N+ L GQ+LSF+VT++ G+T+   +V P  W FG T++  Q
Sbjct:  103 ATNLCPPNWALANDDGGWCNPPRPHFDMSQPAWETIGIYRAGIVPVLYQQVKCWRQGGVRFTVSGFNYFELVLITNVAGSGSVQAMSVKGSKTGWIPLARNWGANWQCNSALVGQALSFRVTSTGGQTLQINSVVPEWWEFGTTFTSNQ 251          
BLAST of EY711526 vs. ExPASy Swiss-Prot
Match: EXP14_ORYSJ (Expansin-A14 OS=Oryza sativa subsp. japonica GN=EXPA14 PE=2 SV=2)

HSP 1 Score: 186.422 bits (472), Expect = 1.827e-46
Identity = 82/153 (53.59%), Postives = 107/153 (69.93%), Query Frame = 2
Query:    2 ATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSR-TGWQPMSRNWGQNWQSNTYLNGQSLSFKVTTSDGRTVTSYNVAPASWSFGRTY-SGAQFR 454
            ATNFC          GGWCNPP+ HFD++QP ++ I  Y AG++PV Y+RVPC ++GG+RFTINGH YFNLVL+TNV   G + ++ I GS  T W PM RNWG NW S +YL GQ+LSF+VT  DG+T+   N+ P+ W FG+T+ S  QF+
Sbjct:  110 ATNFCPPNWDLPSDNGGWCNPPRPHFDMAQPAWEKIGIYSAGIIPVIYQRVPCIKKGGVRFTINGHDYFNLVLVTNVATTGSIKSMDIMGSNSTDWMPMVRNWGANWHSLSYLTGQTLSFRVTNMDGQTLVFKNIVPSGWKFGQTFTSKLQFK 262          
BLAST of EY711526 vs. ExPASy Swiss-Prot
Match: EXP22_ORYSJ (Expansin-A22 OS=Oryza sativa subsp. japonica GN=EXPA22 PE=2 SV=2)

HSP 1 Score: 185.652 bits (470), Expect = 3.117e-46
Identity = 82/153 (53.59%), Postives = 107/153 (69.93%), Query Frame = 2
Query:    2 ATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSR-TGWQPMSRNWGQNWQSNTYLNGQSLSFKVTTSDGRTVTSYNVAPASWSFGRTY-SGAQFR 454
            ATNFC          GGWCNPP+ HFD++QP ++ I  YRAG++PV Y+RVPC ++GG+RFTINGH YFNLVL+TNV   G + ++ + GS  T W PM RNWG NW S +YL GQ LSF+VT  DG+T+   N+ P+ W FG+T+ S  QF+
Sbjct:  128 ATNFCPPNWDLPSDNGGWCNPPRPHFDMAQPAWEKIGIYRAGIIPVIYQRVPCVKKGGVRFTINGHDYFNLVLVTNVATTGLIKSMDVMGSNSTDWLPMVRNWGANWHSLSYLTGQMLSFRVTNMDGQTLVFRNIVPSGWKFGQTFASKLQFK 280          
BLAST of EY711526 vs. ExPASy Swiss-Prot
Match: EXP32_ORYSJ (Expansin-A32 OS=Oryza sativa subsp. japonica GN=EXPA32 PE=2 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 4.071e-46
Identity = 81/150 (54.00%), Postives = 106/150 (70.67%), Query Frame = 2
Query:    2 ATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGS-RTGWQPMSRNWGQNWQSNTYLNGQSLSFKVTTSDGRTVTSYNVAPASWSFGRTYSGAQ 448
            ATN C          GGWCNPP++HFDLS P F  IAQ +AG+VP++Y+RVPC + GGIR+TI G+ YFNLV+++NVGGAGDV  +S+KG+ R  W P+ RNWGQ WQ++  L G+SL+F+V T D R  TS++V P  W FG TY   +
Sbjct:  117 ATNLCPPNPGQSNDNGGWCNPPREHFDLSMPAFLQIAQEKAGIVPISYRRVPCVKVGGIRYTITGNPYFNLVMVSNVGGAGDVAGLSVKGNKRVKWTPLKRNWGQEWQTSEVLTGESLTFRVMTGDHRKATSWHVLPPDWQFGVTYQATK 266          
BLAST of EY711526 vs. ExPASy Swiss-Prot
Match: EXP27_ORYSJ (Putative expansin-A27 OS=Oryza sativa subsp. japonica GN=EXPA27 PE=3 SV=2)

HSP 1 Score: 183.726 bits (465), Expect = 1.184e-45
Identity = 82/146 (56.16%), Postives = 103/146 (70.55%), Query Frame = 2
Query:    2 ATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFKVTTSDGRTVTSYNVAPASWSFGRTYS 439
            ATN C          GGWCNPP++HFD+SQP ++ I  YRAG+VPV Y+RV C RRGG+RFT+ G  +F LVL+ NV G+G V AVS++G+ TGW  MSRNWG NWQS   L GQ LSF VTT+ G+ +   +VAPA W FG+T+S
Sbjct:  103 ATNLCPPNWALPSDGGGWCNPPRRHFDMSQPAWERIGVYRAGIVPVLYRRVRCWRRGGVRFTVGGFDHFELVLVANVAGSGSVAAVSVRGAGTGWLQMSRNWGANWQSLAGLAGQPLSFGVTTTGGQYILFQDVAPAGWKFGQTFS 248          
BLAST of EY711526 vs. ExPASy Swiss-Prot
Match: EXP23_ORYSJ (Expansin-A23 OS=Oryza sativa subsp. japonica GN=EXPA23.1 PE=2 SV=2)

HSP 1 Score: 182.57 bits (462), Expect = 2.639e-45
Identity = 80/153 (52.29%), Postives = 104/153 (67.97%), Query Frame = 2
Query:    2 ATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTG-WQPMSRNWGQNWQSNTYLNGQSLSFKVTTSDGRTVTSYNVAPASWSFGRTY-SGAQFR 454
            ATNFC          GGWCNPP+ HFD++QP ++ I  Y AG++PV Y+RVPC ++GG+RFTINGH YF LVL+TNV  AG + ++ + GS T  W PM+RNWG  W S  YL GQ LSF+VT +D +T+   NV P  W FG+T+ S  QF+
Sbjct:  115 ATNFCPPNWNLPSDNGGWCNPPRPHFDMAQPAWEKIGVYSAGIIPVIYQRVPCVKKGGLRFTINGHDYFQLVLVTNVAAAGSIKSMEVMGSNTADWMPMARNWGAQWHSLAYLTGQGLSFRVTNTDDQTLVFTNVVPPGWKFGQTFASKLQFK 267          
BLAST of EY711526 vs. ExPASy Swiss-Prot
Match: EXP13_ORYSJ (Expansin-A13 OS=Oryza sativa subsp. japonica GN=EXPA13 PE=2 SV=2)

HSP 1 Score: 181.415 bits (459), Expect = 5.878e-45
Identity = 80/153 (52.29%), Postives = 105/153 (68.63%), Query Frame = 2
Query:    2 ATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRT-GWQPMSRNWGQNWQSNTYLNGQSLSFKVTTSDGRTVTSYNVAPASWSFGRTY-SGAQFR 454
            ATNFC          GGWCNPP+ HFD++QP ++ I  YR G++PV Y+RVPC ++GG+RFTINGH YF LVL+TNVG AG + A+ +KGS++  W  M+ NWG  W S  YL GQ LSF+VT +DG+T+   NV    W FG+T+ S  QF+
Sbjct:  110 ATNFCPPNWDLPSDSGGWCNPPRPHFDMAQPAWEKIGIYRGGIIPVIYQRVPCMKKGGVRFTINGHDYFQLVLLTNVGAAGSIKAMDVKGSKSPDWMAMAHNWGAQWHSLAYLTGQGLSFRVTITDGQTLVFPNVVRPGWRFGQTFASNIQFK 262          
BLAST of EY711526 vs. ExPASy Swiss-Prot
Match: EXP22_ARATH (Expansin-A22 OS=Arabidopsis thaliana GN=EXPA22 PE=2 SV=2)

HSP 1 Score: 179.874 bits (455), Expect = 1.710e-44
Identity = 81/147 (55.10%), Postives = 103/147 (70.07%), Query Frame = 2
Query:    2 ATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFKVTTSDGRTVTSYNVAPASWSFGRTYSG 442
            ATNFC            WCNPPQ+HFDLS  +F  IA+Y+AGVVPV Y+R+PC + GG++F   G+ YF +VLI NVGGAGD+  V +KG++TGW  M +NWGQNW + T L GQ LSF+VTTSDG T   +NV P +W FG+T+ G
Sbjct:  125 ATNFCPANYSKTTDL--WCNPPQKHFDLSLAMFLKIAKYKAGVVPVRYRRIPCSKTGGVKFETKGNPYFLMVLIYNVGGAGDIKYVQVKGNKTGWITMKKNWGQNWTTITVLTGQGLSFRVTTSDGITKDFWNVMPKNWGFGQTFDG 269          
BLAST of EY711526 vs. ExPASy Swiss-Prot
Match: EXPA7_ARATH (Expansin-A7 OS=Arabidopsis thaliana GN=EXPA7 PE=2 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 3.810e-44
Identity = 81/153 (52.94%), Postives = 112/153 (73.20%), Query Frame = 2
Query:    2 ATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFKVTT-SDGRTVTSYNVAPASWSFGRTY-SGAQFR 454
            ATN C          GGWCNPP+ HFD+++P F  +A +RAG++PVAY+RVPC R GG+RF   G+SY+ L+ + NVGGAGD+ ++++KGSRT W  MS NWG ++Q+ + L GQSLSF+VT+ + G T+ ++NVAPA+WS G+TY S A FR
Sbjct:  110 ATNLCPPNWYQDSNAGGWCNPPRTHFDMAKPAFMKLAYWRAGIIPVAYRRVPCQRSGGMRFQFQGNSYWLLIFVMNVGGAGDIKSMAVKGSRTNWISMSHNWGASYQAFSSLYGQSLSFRVTSYTTGETIYAWNVAPANWSGGKTYKSTANFR 262          
BLAST of EY711526 vs. ExPASy Swiss-Prot
Match: EXP31_ORYSJ (Expansin-A31 OS=Oryza sativa subsp. japonica GN=EXPA31 PE=2 SV=2)

HSP 1 Score: 178.718 bits (452), Expect = 3.810e-44
Identity = 83/149 (55.70%), Postives = 104/149 (69.80%), Query Frame = 2
Query:    2 ATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFKVTTSDGRTVTSYNVAPASWSFGRTYSGAQ 448
            ATN C          GGWCNPP+ HFD+SQP ++ I  Y+AG+VPV Y+RV C R+GG+RFT+ G +YF LVLITNV G+G V +  IKG+ TGW  MSRNWG NWQS   L GQ+LSF VTT+ G+ +   +VAPA W FG+T+S  Q
Sbjct:  104 ATNLCPPNWALPSDGGGWCNPPRPHFDMSQPAWEQIGVYQAGIVPVLYQRVRCWRQGGVRFTVAGLNYFELVLITNVAGSGSVASAWIKGTNTGWIQMSRNWGANWQSLAGLAGQALSFAVTTTGGQYLQFQDVAPAWWQFGQTFSTYQ 252          
The following BLAST results are available for this feature:
BLAST of EY711526 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 64
Match NameE-valueIdentityDescription
EXP28_ORYSJ1.827e-4654.36Expansin-A28 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP14_ORYSJ1.827e-4653.59Expansin-A14 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP22_ORYSJ3.117e-4653.59Expansin-A22 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP32_ORYSJ4.071e-4654.00Expansin-A32 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP27_ORYSJ1.184e-4556.16Putative expansin-A27 OS=Oryza sativa subsp. japon... [more]
EXP23_ORYSJ2.639e-4552.29Expansin-A23 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP13_ORYSJ5.878e-4552.29Expansin-A13 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP22_ARATH1.710e-4455.10Expansin-A22 OS=Arabidopsis thaliana GN=EXPA22 PE=... [more]
EXPA7_ARATH3.810e-4452.94Expansin-A7 OS=Arabidopsis thaliana GN=EXPA7 PE=2 ... [more]
EXP31_ORYSJ3.810e-4455.70Expansin-A31 OS=Oryza sativa subsp. japonica GN=EX... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-008-G03-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY711526 ID=EY711526; Name=EY711526; organism=Citrus sinensis; type=EST; length=884bp
AGCTACCAATTTTTGCCCACCGAACAACGCCCTCCCCAACAATGCAGGCG
GTTGGTGCAATCCTCCGCAGCAACATTTTGATCTCTCTCAGCCTGTGTTC
CAACACATTGCTCAATACAGAGCTGGAGTTGTCCCTGTAGCTTACAAGAG
GGTACCCTGCGGAAGAAGGGGAGGCATCAGGTTCACAATCAATGGCCATT
CCTACTTCAACCTAGTGTTGATCACCAACGTTGGTGGTGCTGGTGATGTT
CATGCTGTTTCAATCAAAGGGTCTAGAACTGGCTGGCAGCCCATGTCAAG
AAACTGGGGCCAAAACTGGCAAAGCAACACTTATCTCAATGGCCAAAGCC
TGTCATTTAAGGTCACCACAAGCGATGGCCGCACTGTGACTTCCTACAAT
GTTGCCCCTGCTAGCTGGTCCTTTGGCCGAACTTACTCCGGTGCTCAATT
CCGCTAGAGCCACCAAGACCATTAGAGATTGAGTTTTAACACCTTTTTTA
GCTAAATATTCGTGTACTAAGTAGTATATTTTAGTATGAAATTTTAGCAT
ACTAGGGTATATATATATATATATAATATAGAACTAGCTATGTGGCTAGT
TTTTGGCTTCCCAGGGTCAAAATGAAAAAACGGGCTTATTTTACATGGCT
TATTCTTTTCATTCTGAATTGATTTTATGGNTGCGTGGGGTGTCTAATTA
TGGATCCTCNNTATATCTGGGGATCCTTTTTTACCNNTTCTTTTGAGGGG
TTCTGTGAAGTGCACAAATGGGCTGAGTGAAAATTTTCCACCGNNCCATT
GTGTTGAATAGCTGCTTCTCTTTTTTGATGCTCNTAGGAATGCTTGCCCA
AGCACTTTTTGGATGCAAGTTTATGCATCAGCAG
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