EY711522

Overview
NameEY711522
Unique NameEY711522
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length908
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY711522 vs. ExPASy Swiss-Prot
Match: HSF2_CHICK (Heat shock factor protein 2 OS=Gallus gallus GN=HSF2 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 4.149e-17
Identity = 53/157 (33.76%), Postives = 84/157 (53.50%), Query Frame = 1
Query:  259 AGPPPFLTKTYEMVEDLSTDAIVSWSRTRNSFIVWDSHQFSTTLLPKYFKHSNFSSFIRQLNTYGFRKV-----------DPDRWEFANEGFLGGQKHLLKTIKRRRHVSQSMQQRGGEACL----------EVGQYGLDGELERLKRDRNVLMAEL 666
            AG P FL+K + +V +  ++ +++WS+   SF+V D  +F+  +LPKYFKH+N +SF+RQLN YGFRKV                EF +  F  G++ LL+ IKR+   S+  + +  +  L          E+ Q  ++  L  LKR+   L  E+
Sbjct:   19 AGVPAFLSKLWALVGEAPSNQLITWSQNGQSFLVLDEQRFAKEILPKYFKHNNMASFVRQLNMYGFRKVVHVDSGIVKLERDGLVEFQHPYFKQGREDLLEHIKRKVSSSRPEENKISQEDLSKIISSAQKVEIKQETIESRLSALKRENESLWREV 175          
BLAST of EY711522 vs. ExPASy Swiss-Prot
Match: HSF4_HUMAN (Heat shock factor protein 4 OS=Homo sapiens GN=HSF4 PE=1 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.207e-16
Identity = 55/173 (31.79%), Postives = 89/173 (51.45%), Query Frame = 1
Query:  268 PPFLTKTYEMVEDLSTDAIVSWSRTRNSFIVWDSHQFSTTLLPKYFKHSNFSSFIRQLNTYGFRKV-----------DPDRWEFANEGFLGGQKHLLKTIKRR---------RHVSQSMQQRGGEA-CLEVGQYGLDGELERLKRDRNVLMAELLG*GHISSNQEDHSVQWRI 723
            P FL K + +V D  TD ++ WS +  SF+V D  +F+  +LP+YFKHSN +SF+RQLN YGFRKV           + D  EF +  F+ G++ LL+ ++R+         R   + + +  GE   L   Q   +  L  L++   +L  E++      + ++ H  Q R+
Sbjct:   19 PAFLGKLWALVGDPGTDHLIRWSPSGTSFLVSDQSRFAKEVLPQYFKHSNMASFVRQLNMYGFRKVVSIEQGGLLRPERDHVEFQHPSFVRGREQLLERVRRKVPALRGDDGRWRPEDLGRLLGEVQALRGVQESTEARLRELRQQNEILWREVV------TLRQSHGQQHRV 185          
BLAST of EY711522 vs. ExPASy Swiss-Prot
Match: HSF4_CANFA (Heat shock factor protein 4 OS=Canis familiaris GN=HSF4 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.577e-16
Identity = 43/103 (41.75%), Postives = 64/103 (62.14%), Query Frame = 1
Query:  268 PPFLTKTYEMVEDLSTDAIVSWSRTRNSFIVWDSHQFSTTLLPKYFKHSNFSSFIRQLNTYGFRKV-----------DPDRWEFANEGFLGGQKHLLKTIKRR 543
            P FL K + +V D  TD ++ WS +  SF+V D  +F+  +LP+YFKHSN +SF+RQLN YGFRKV           + D  EF +  F+ G++ LL+ ++R+
Sbjct:   18 PAFLGKLWALVGDPGTDHLIRWSPSGTSFLVSDQSRFAKEVLPQYFKHSNMASFVRQLNMYGFRKVVSIEQGGLLRPERDHVEFQHPSFVRGREQLLERVRRK 120          
BLAST of EY711522 vs. ExPASy Swiss-Prot
Match: HSF2_MOUSE (Heat shock factor protein 2 OS=Mus musculus GN=Hsf2 PE=2 SV=2)

HSP 1 Score: 87.0409 bits (214), Expect = 1.577e-16
Identity = 51/154 (33.12%), Postives = 79/154 (51.30%), Query Frame = 1
Query:  268 PPFLTKTYEMVEDLSTDAIVSWSRTRNSFIVWDSHQFSTTLLPKYFKHSNFSSFIRQLNTYGFRKV-----------DPDRWEFANEGFLGGQKHLLKTIKRRRHVSQSMQQR----------GGEACLEVGQYGLDGELERLKRDRNVLMAEL 666
            P FL+K + +VE+  T+  ++WS+   SF+V D  +F+  +LPKYFKH+N +SF+RQLN YGFRKV                EF +  F  GQ  LL+ IKR+   S+  + +               +++ Q  ++  L  LK +   L  E+
Sbjct:    8 PAFLSKLWTLVEETHTNEFITWSQNGQSFLVLDEQRFAKEILPKYFKHNNMASFVRQLNMYGFRKVVHIESGIIKQERDGPVEFQHPYFKQGQDDLLENIKRKVSSSKPEENKIRQEDLTKIISSAQKVQIKQETIESRLSELKSENESLWKEV 161          
BLAST of EY711522 vs. ExPASy Swiss-Prot
Match: HSF2_HUMAN (Heat shock factor protein 2 OS=Homo sapiens GN=HSF2 PE=1 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.577e-16
Identity = 51/154 (33.12%), Postives = 79/154 (51.30%), Query Frame = 1
Query:  268 PPFLTKTYEMVEDLSTDAIVSWSRTRNSFIVWDSHQFSTTLLPKYFKHSNFSSFIRQLNTYGFRKV-----------DPDRWEFANEGFLGGQKHLLKTIKRRRHVSQSMQQR----------GGEACLEVGQYGLDGELERLKRDRNVLMAEL 666
            P FL+K + +VE+  T+  ++WS+   SF+V D  +F+  +LPKYFKH+N +SF+RQLN YGFRKV                EF +  F  GQ  LL+ IKR+   S+  + +               +++ Q  ++  L  LK +   L  E+
Sbjct:    8 PAFLSKLWTLVEETHTNEFITWSQNGQSFLVLDEQRFAKEILPKYFKHNNMASFVRQLNMYGFRKVVHIDSGIVKQERDGPVEFQHPYFKQGQDDLLENIKRKVSSSKPEENKIRQEDLTKIISSAQKVQIKQETIESRLSELKSENESLWKEV 161          
BLAST of EY711522 vs. ExPASy Swiss-Prot
Match: PRR1_SCHPO (Transcription factor prr1 OS=Schizosaccharomyces pombe GN=prr1 PE=1 SV=2)

HSP 1 Score: 85.5001 bits (210), Expect = 4.587e-16
Identity = 50/141 (35.46%), Postives = 78/141 (55.32%), Query Frame = 1
Query:  262 GPPPFLTKTYEMVEDLSTDAIVSWSRTRNSFIVWDSHQFSTTLLPKYFKHSNFSSFIRQLNTYGFRKVDPDR----------WEFANEGFLGGQKHLLKTIKRRRHVSQSMQQRGGEACLEVGQYGLDGELERLK-RDRNV 651
            G   F+ K + M+E+     I+ WS + +SFIV D+++F+ T+LP++FKHSNF+SF+RQLN Y F KV  +           WEF ++ F    K LL  IKR+    +++        +E  +  +D  L+  K  DRN+
Sbjct:    6 GSSDFVRKLFNMLEEPEYRHILRWSDSGDSFIVLDTNEFTKTILPRHFKHSNFASFVRQLNKYDFHKVRHEEGAPSIYGEGAWEFRHDDFQLHHKDLLDNIKRKAPSKRNLANENTAPVIENLKQQVDSILDFQKLLDRNL 146          
BLAST of EY711522 vs. ExPASy Swiss-Prot
Match: HSF_DROME (Heat shock factor protein OS=Drosophila melanogaster GN=Hsf PE=1 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.335e-15
Identity = 55/177 (31.07%), Postives = 89/177 (50.28%), Query Frame = 1
Query:  259 AGPPPFLTKTYEMVEDLSTDAIVSWSRTRNSFIVWDSHQFSTTLLPKYFKHSNFSSFIRQLNTYGFRKV----------DPDRWEFANEGFLGGQKHLLKTIKRRRHVSQSMQQRG---GEACLEV---------GQYGLDGELERLKRDRNVLMAELLG*GHISSNQEDHSVQWRI 723
            +G P FL K + +V+D  T+ ++ W++   SF++ +  QF+  LLP  +KH+N +SFIRQLN YGF K+          D D  EF++  F      LL  IKR+   +++   +G    EA  ++          Q  LD     +K++  VL  E      I+S ++ H+ Q +I
Sbjct:   44 SGVPAFLAKLWRLVDDADTNRLICWTKDGQSFVIQNQAQFAKELLPLNYKHNNMASFIRQLNMYGFHKITSIDNGGLRFDRDEIEFSHPFFKRNSPFLLDQIKRKISNNKNGDDKGVLKPEAMSKILTDVKVMRGRQDNLDSRFSAMKQENEVLWRE------IASLRQKHAKQQQI 214          
BLAST of EY711522 vs. ExPASy Swiss-Prot
Match: SKN7_YEAST (Transcription factor SKN7 OS=Saccharomyces cerevisiae GN=SKN7 PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.527e-11
Identity = 39/102 (38.24%), Postives = 57/102 (55.88%), Query Frame = 1
Query:  274 FLTKTYEMVEDLSTDAIVSWSRTRNSFIVWDSHQFSTTLLPKYFKHSNFSSFIRQLNTYGFRKV--DPDR----------WEFANEGFLGGQKHLLKTIKRR 543
            F+ K + ++E+     IV+W+    SF+V D+ +F+T +LP +FKHSNF+SF+RQLN Y F KV   P+           WEF +  F       L  IKR+
Sbjct:   87 FVRKLFRILENNEYPDIVTWTENGKSFVVLDTGKFTTHILPNHFKHSNFASFVRQLNKYDFHKVKRSPEERQRCKYGEQSWEFQHPEFRVHYGKGLDNIKRK 188          
The following BLAST results are available for this feature:
BLAST of EY711522 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 68
Match NameE-valueIdentityDescription
HSF2_CHICK4.149e-1733.76Heat shock factor protein 2 OS=Gallus gallus GN=HS... [more]
HSF4_HUMAN1.207e-1631.79Heat shock factor protein 4 OS=Homo sapiens GN=HSF... [more]
HSF4_CANFA1.577e-1641.75Heat shock factor protein 4 OS=Canis familiaris GN... [more]
HSF2_MOUSE1.577e-1633.12Heat shock factor protein 2 OS=Mus musculus GN=Hsf... [more]
HSF2_HUMAN1.577e-1633.12Heat shock factor protein 2 OS=Homo sapiens GN=HSF... [more]
PRR1_SCHPO4.587e-1635.46Transcription factor prr1 OS=Schizosaccharomyces p... [more]
HSF_DROME1.335e-1531.07Heat shock factor protein OS=Drosophila melanogast... [more]
SKN7_YEAST1.527e-1138.24Transcription factor SKN7 OS=Saccharomyces cerevis... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-008-F10-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY711522 ID=EY711522; Name=EY711522; organism=Citrus sinensis; type=EST; length=908bp
CCACGCGTCCGTGGAGATCTTACTGAAAAATTACATCAAGTCCGTAAACA
ACTCAAAATTCGTACTAAAGCCTACTGAAAGCTCGCTTAATTAATAACTC
TCTGTTTAAAACCTATATTAGCATTAGCTATGGAGGGAGTGAGGGTGAAG
GAAGAAGAGACGGTGACGTACGCAGCGACGACAGCTACTGCTGCATCAGC
GTCGTCGTCTTCGTCGTCTTCCAACTTTATGCCGCAGCCGTTGGAGGGTT
TGCACGATGCAGGCCCGCCTCCGTTTCTGACGAAAACCTACGAAATGGTC
GAGGATCTATCAACGGATGCGATCGTTTCCTGGAGCAGAACTCGCAATAG
CTTCATTGTGTGGGACTCTCACCAGTTCTCTACTACTTTGCTTCCGAAAT
ATTTCAAGCACAGTAATTTTTCTAGCTTCATTCGCCAGCTCAACACTTAT
GGTTTTAGAAAGGTTGATCCTGATAGATGGGAATTTGCCAATGAAGGATT
TTTGGGAGGGCAGAAGCATCTACTGAAAACAATCAAGAGAAGGCGACACG
TCTCACAGAGTATGCAACAGCGAGGAGGAGAAGCTTGTCTTGAGGTGGGA
CAATATGGACTGGATGGTGAGCTTGAAAGATTAAAGAGGGACCGAAATGT
GTTGATGGCAGAATTGTTAGGCTGAGGGCACATCAGCAGCAATCAAGAAG
ATCACTCAGTGCAATGGAGGATANGTTATTAAGCACAGAAAAGAGCAGCA
GCAGATGATGACTTTCCTTGGCAAAGCACTCCAAAACCCATCGNTTTTCC
CAGCATTAGCTCAGAGTAATGCACACAGAAGAGAACTGTGGAGGTGTTCA
AACTGGGAGGAAGCGGAGGACTACGGCCACCCAAGCATGGAGAACTACAA
GAAACATT
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