EY711460
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY711460 vs. ExPASy Swiss-Prot
Match: RK2_SOLTU (50S ribosomal protein L2, chloroplastic OS=Solanum tuberosum GN=rpl2-A PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 3.808e-24 Identity = 59/64 (92.19%), Postives = 59/64 (92.19%), Query Frame = 2 Query: 533 TDMPLRTAIHNIEITLGKGGQLARAAGAVAKLIAKEGTSATLKLPSGEVRLISKNCSATVRTSG 724 TDMPL TAIHNIEITLGKGGQLARAAGAVAKLIAKEG SATLKLPSGEVRLISKNCSATV G Sbjct: 131 TDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVG 194 HSP 2 Score: 73.559 bits (179), Expect = 1.693e-15 Identity = 46/102 (45.10%), Postives = 59/102 (57.84%), Query Frame = 1 Query: 583 KGWTIS*SSGCCSETDCKRGDIGHIKITFWGGPFDIQKLLSNSPDKWGMVGANQNSLGRARSKWWLGKRPVVRGVVMTL*TTPLGWGR-KAPNGKKRPATPW 885 KG ++ ++G ++ K G +K+ G I K S + + G VG NQ SLGRA SK WLGKRPVVRGVVM P G G +AP G+K+P TPW Sbjct: 148 KGGQLARAAGAVAKLIAKEGKSATLKLPS-GEVRLISKNCSATVGQVGNVGVNQKSLGRAGSKRWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPTTPW 248 HSP 3 Score: 30.4166 bits (67), Expect = 1.693e-15 Identity = 17/27 (62.96%), Postives = 18/27 (66.67%), Query Frame = 3 Query: 879 PLGYPALGRRVEK-E*YSGNLIPSRRT 956 P GYPALGRR K YS NLI RR+ Sbjct: 247 PWGYPALGRRSRKRNKYSDNLILRRRS 273
BLAST of EY711460 vs. ExPASy Swiss-Prot
Match: RK2_SOLLC (50S ribosomal protein L2, chloroplastic OS=Solanum lycopersicum GN=rpl2-A PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 3.808e-24 Identity = 59/64 (92.19%), Postives = 59/64 (92.19%), Query Frame = 2 Query: 533 TDMPLRTAIHNIEITLGKGGQLARAAGAVAKLIAKEGTSATLKLPSGEVRLISKNCSATVRTSG 724 TDMPL TAIHNIEITLGKGGQLARAAGAVAKLIAKEG SATLKLPSGEVRLISKNCSATV G Sbjct: 131 TDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVG 194 HSP 2 Score: 73.559 bits (179), Expect = 1.693e-15 Identity = 46/102 (45.10%), Postives = 59/102 (57.84%), Query Frame = 1 Query: 583 KGWTIS*SSGCCSETDCKRGDIGHIKITFWGGPFDIQKLLSNSPDKWGMVGANQNSLGRARSKWWLGKRPVVRGVVMTL*TTPLGWGR-KAPNGKKRPATPW 885 KG ++ ++G ++ K G +K+ G I K S + + G VG NQ SLGRA SK WLGKRPVVRGVVM P G G +AP G+K+P TPW Sbjct: 148 KGGQLARAAGAVAKLIAKEGKSATLKLPS-GEVRLISKNCSATVGQVGNVGVNQKSLGRAGSKRWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPTTPW 248 HSP 3 Score: 30.4166 bits (67), Expect = 1.693e-15 Identity = 17/27 (62.96%), Postives = 18/27 (66.67%), Query Frame = 3 Query: 879 PLGYPALGRRVEK-E*YSGNLIPSRRT 956 P GYPALGRR K YS NLI RR+ Sbjct: 247 PWGYPALGRRSRKRNKYSDNLILRRRS 273
BLAST of EY711460 vs. ExPASy Swiss-Prot
Match: RK2_SOLBU (50S ribosomal protein L2, chloroplastic OS=Solanum bulbocastanum GN=rpl2-A PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 3.808e-24 Identity = 59/64 (92.19%), Postives = 59/64 (92.19%), Query Frame = 2 Query: 533 TDMPLRTAIHNIEITLGKGGQLARAAGAVAKLIAKEGTSATLKLPSGEVRLISKNCSATVRTSG 724 TDMPL TAIHNIEITLGKGGQLARAAGAVAKLIAKEG SATLKLPSGEVRLISKNCSATV G Sbjct: 131 TDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVG 194 HSP 2 Score: 73.559 bits (179), Expect = 1.693e-15 Identity = 46/102 (45.10%), Postives = 59/102 (57.84%), Query Frame = 1 Query: 583 KGWTIS*SSGCCSETDCKRGDIGHIKITFWGGPFDIQKLLSNSPDKWGMVGANQNSLGRARSKWWLGKRPVVRGVVMTL*TTPLGWGR-KAPNGKKRPATPW 885 KG ++ ++G ++ K G +K+ G I K S + + G VG NQ SLGRA SK WLGKRPVVRGVVM P G G +AP G+K+P TPW Sbjct: 148 KGGQLARAAGAVAKLIAKEGKSATLKLPS-GEVRLISKNCSATVGQVGNVGVNQKSLGRAGSKRWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPTTPW 248 HSP 3 Score: 30.4166 bits (67), Expect = 1.693e-15 Identity = 17/27 (62.96%), Postives = 18/27 (66.67%), Query Frame = 3 Query: 879 PLGYPALGRRVEK-E*YSGNLIPSRRT 956 P GYPALGRR K YS NLI RR+ Sbjct: 247 PWGYPALGRRSRKRNKYSDNLILRRRS 273
BLAST of EY711460 vs. ExPASy Swiss-Prot
Match: RK2_SINAL (50S ribosomal protein L2, chloroplastic OS=Sinapis alba GN=rpl2 PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 3.808e-24 Identity = 59/64 (92.19%), Postives = 59/64 (92.19%), Query Frame = 2 Query: 533 TDMPLRTAIHNIEITLGKGGQLARAAGAVAKLIAKEGTSATLKLPSGEVRLISKNCSATVRTSG 724 TDMPL TAIHNIEITLGKGGQLARAAGAVAKLIAKEG SATLKLPSGEVRLISKNCSATV G Sbjct: 131 TDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVG 194 HSP 2 Score: 73.9442 bits (180), Expect = 3.716e-15 Identity = 46/102 (45.10%), Postives = 59/102 (57.84%), Query Frame = 1 Query: 583 KGWTIS*SSGCCSETDCKRGDIGHIKITFWGGPFDIQKLLSNSPDKWGMVGANQNSLGRARSKWWLGKRPVVRGVVMTL*TTPLGWGR-KAPNGKKRPATPW 885 KG ++ ++G ++ K G +K+ G I K S + + G VG NQ SLGRA SK WLGKRPVVRGVVM P G G +AP G+K+P TPW Sbjct: 148 KGGQLARAAGAVAKLIAKEGKSATLKLPS-GEVRLISKNCSATVGQVGNVGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPVTPW 248 HSP 3 Score: 28.8758 bits (63), Expect = 3.716e-15 Identity = 16/27 (59.26%), Postives = 18/27 (66.67%), Query Frame = 3 Query: 879 PLGYPALGRRVEK-E*YSGNLIPSRRT 956 P GYPALGRR K + YS LI RR+ Sbjct: 247 PWGYPALGRRTRKRKKYSETLILRRRS 273
BLAST of EY711460 vs. ExPASy Swiss-Prot
Match: RK2_RANMC (50S ribosomal protein L2, chloroplastic OS=Ranunculus macranthus GN=rpl2-A PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 3.808e-24 Identity = 59/64 (92.19%), Postives = 59/64 (92.19%), Query Frame = 2 Query: 533 TDMPLRTAIHNIEITLGKGGQLARAAGAVAKLIAKEGTSATLKLPSGEVRLISKNCSATVRTSG 724 TDMPL TAIHNIEITLGKGGQLARAAGAVAKLIAKEG SATLKLPSGEVRLISKNCSATV G Sbjct: 131 TDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVG 194 HSP 2 Score: 73.559 bits (179), Expect = 6.275e-15 Identity = 46/102 (45.10%), Postives = 59/102 (57.84%), Query Frame = 1 Query: 583 KGWTIS*SSGCCSETDCKRGDIGHIKITFWGGPFDIQKLLSNSPDKWGMVGANQNSLGRARSKWWLGKRPVVRGVVMTL*TTPLGWGR-KAPNGKKRPATPW 885 KG ++ ++G ++ K G +K+ G I K S + + G VG NQ SLGRA SK WLGKRPVVRGVVM P G G +AP G+K+P TPW Sbjct: 148 KGGQLARAAGAVAKLIAKEGKSATLKLPS-GEVRLISKNCSATVGQVGNVGVNQKSLGRAGSKRWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPTTPW 248 HSP 3 Score: 28.4906 bits (62), Expect = 6.275e-15 Identity = 16/27 (59.26%), Postives = 18/27 (66.67%), Query Frame = 3 Query: 879 PLGYPALGRRVEK-E*YSGNLIPSRRT 956 P GYPALGRR K YS +LI RR+ Sbjct: 247 PWGYPALGRRSRKRNKYSDSLILRRRS 273
BLAST of EY711460 vs. ExPASy Swiss-Prot
Match: RK2_OLIPU (50S ribosomal protein L2, chloroplastic OS=Olimarabidopsis pumila GN=rpl2-A PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 3.808e-24 Identity = 59/64 (92.19%), Postives = 59/64 (92.19%), Query Frame = 2 Query: 533 TDMPLRTAIHNIEITLGKGGQLARAAGAVAKLIAKEGTSATLKLPSGEVRLISKNCSATVRTSG 724 TDMPL TAIHNIEITLGKGGQLARAAGAVAKLIAKEG SATLKLPSGEVRLISKNCSATV G Sbjct: 131 TDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVG 194 HSP 2 Score: 73.559 bits (179), Expect = 4.829e-15 Identity = 46/102 (45.10%), Postives = 59/102 (57.84%), Query Frame = 1 Query: 583 KGWTIS*SSGCCSETDCKRGDIGHIKITFWGGPFDIQKLLSNSPDKWGMVGANQNSLGRARSKWWLGKRPVVRGVVMTL*TTPLGWGR-KAPNGKKRPATPW 885 KG ++ ++G ++ K G +K+ G I K S + + G VG NQ SLGRA SK WLGKRPVVRGVVM P G G +AP G+K+P TPW Sbjct: 148 KGGQLARAAGAVAKLIAKEGKSATLKLPS-GEVRLISKNCSATVGQVGNVGVNQKSLGRAGSKRWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPVTPW 248 HSP 3 Score: 28.8758 bits (63), Expect = 4.829e-15 Identity = 16/27 (59.26%), Postives = 18/27 (66.67%), Query Frame = 3 Query: 879 PLGYPALGRRVEK-E*YSGNLIPSRRT 956 P GYPALGRR K + YS LI RR+ Sbjct: 247 PWGYPALGRRTRKRKKYSETLILRRRS 273
BLAST of EY711460 vs. ExPASy Swiss-Prot
Match: RK2_NICTO (50S ribosomal protein L2, chloroplastic OS=Nicotiana tomentosiformis GN=rpl2-A PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 3.808e-24 Identity = 59/64 (92.19%), Postives = 59/64 (92.19%), Query Frame = 2 Query: 533 TDMPLRTAIHNIEITLGKGGQLARAAGAVAKLIAKEGTSATLKLPSGEVRLISKNCSATVRTSG 724 TDMPL TAIHNIEITLGKGGQLARAAGAVAKLIAKEG SATLKLPSGEVRLISKNCSATV G Sbjct: 131 TDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVG 194 HSP 2 Score: 73.559 bits (179), Expect = 1.693e-15 Identity = 46/102 (45.10%), Postives = 59/102 (57.84%), Query Frame = 1 Query: 583 KGWTIS*SSGCCSETDCKRGDIGHIKITFWGGPFDIQKLLSNSPDKWGMVGANQNSLGRARSKWWLGKRPVVRGVVMTL*TTPLGWGR-KAPNGKKRPATPW 885 KG ++ ++G ++ K G +K+ G I K S + + G VG NQ SLGRA SK WLGKRPVVRGVVM P G G +AP G+K+P TPW Sbjct: 148 KGGQLARAAGAVAKLIAKEGKSATLKLPS-GEVRLISKNCSATVGQVGNVGVNQKSLGRAGSKRWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPTTPW 248 HSP 3 Score: 30.4166 bits (67), Expect = 1.693e-15 Identity = 17/27 (62.96%), Postives = 18/27 (66.67%), Query Frame = 3 Query: 879 PLGYPALGRRVEK-E*YSGNLIPSRRT 956 P GYPALGRR K YS NLI RR+ Sbjct: 247 PWGYPALGRRSRKRNKYSDNLILRRRS 273
BLAST of EY711460 vs. ExPASy Swiss-Prot
Match: RK2_NICSY (50S ribosomal protein L2, chloroplastic OS=Nicotiana sylvestris GN=rpl2-A PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 3.808e-24 Identity = 59/64 (92.19%), Postives = 59/64 (92.19%), Query Frame = 2 Query: 533 TDMPLRTAIHNIEITLGKGGQLARAAGAVAKLIAKEGTSATLKLPSGEVRLISKNCSATVRTSG 724 TDMPL TAIHNIEITLGKGGQLARAAGAVAKLIAKEG SATLKLPSGEVRLISKNCSATV G Sbjct: 131 TDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVG 194 HSP 2 Score: 73.559 bits (179), Expect = 1.693e-15 Identity = 46/102 (45.10%), Postives = 59/102 (57.84%), Query Frame = 1 Query: 583 KGWTIS*SSGCCSETDCKRGDIGHIKITFWGGPFDIQKLLSNSPDKWGMVGANQNSLGRARSKWWLGKRPVVRGVVMTL*TTPLGWGR-KAPNGKKRPATPW 885 KG ++ ++G ++ K G +K+ G I K S + + G VG NQ SLGRA SK WLGKRPVVRGVVM P G G +AP G+K+P TPW Sbjct: 148 KGGQLARAAGAVAKLIAKEGKSATLKLPS-GEVRLISKNCSATVGQVGNVGVNQKSLGRAGSKRWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPTTPW 248 HSP 3 Score: 30.4166 bits (67), Expect = 1.693e-15 Identity = 17/27 (62.96%), Postives = 18/27 (66.67%), Query Frame = 3 Query: 879 PLGYPALGRRVEK-E*YSGNLIPSRRT 956 P GYPALGRR K YS NLI RR+ Sbjct: 247 PWGYPALGRRSRKRNKYSDNLILRRRS 273
BLAST of EY711460 vs. ExPASy Swiss-Prot
Match: RK2_NASOF (50S ribosomal protein L2, chloroplastic OS=Nasturtium officinale GN=rpl2-A PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 3.808e-24 Identity = 59/64 (92.19%), Postives = 59/64 (92.19%), Query Frame = 2 Query: 533 TDMPLRTAIHNIEITLGKGGQLARAAGAVAKLIAKEGTSATLKLPSGEVRLISKNCSATVRTSG 724 TDMPL TAIHNIEITLGKGGQLARAAGAVAKLIAKEG SATLKLPSGEVRLISKNCSATV G Sbjct: 131 TDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVG 194 HSP 2 Score: 73.9442 bits (180), Expect = 3.716e-15 Identity = 46/102 (45.10%), Postives = 59/102 (57.84%), Query Frame = 1 Query: 583 KGWTIS*SSGCCSETDCKRGDIGHIKITFWGGPFDIQKLLSNSPDKWGMVGANQNSLGRARSKWWLGKRPVVRGVVMTL*TTPLGWGR-KAPNGKKRPATPW 885 KG ++ ++G ++ K G +K+ G I K S + + G VG NQ SLGRA SK WLGKRPVVRGVVM P G G +AP G+K+P TPW Sbjct: 148 KGGQLARAAGAVAKLIAKEGKSATLKLPS-GEVRLISKNCSATVGQVGNVGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPVTPW 248 HSP 3 Score: 28.8758 bits (63), Expect = 3.716e-15 Identity = 16/27 (59.26%), Postives = 18/27 (66.67%), Query Frame = 3 Query: 879 PLGYPALGRRVEK-E*YSGNLIPSRRT 956 P GYPALGRR K + YS LI RR+ Sbjct: 247 PWGYPALGRRTRKRKKYSETLILRRRS 273
BLAST of EY711460 vs. ExPASy Swiss-Prot
Match: RK2_NANDO (50S ribosomal protein L2, chloroplastic OS=Nandina domestica GN=rpl2-A PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 3.808e-24 Identity = 59/64 (92.19%), Postives = 59/64 (92.19%), Query Frame = 2 Query: 533 TDMPLRTAIHNIEITLGKGGQLARAAGAVAKLIAKEGTSATLKLPSGEVRLISKNCSATVRTSG 724 TDMPL TAIHNIEITLGKGGQLARAAGAVAKLIAKEG SATLKLPSGEVRLISKNCSATV G Sbjct: 131 TDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVG 194 HSP 2 Score: 73.559 bits (179), Expect = 6.275e-15 Identity = 46/102 (45.10%), Postives = 59/102 (57.84%), Query Frame = 1 Query: 583 KGWTIS*SSGCCSETDCKRGDIGHIKITFWGGPFDIQKLLSNSPDKWGMVGANQNSLGRARSKWWLGKRPVVRGVVMTL*TTPLGWGR-KAPNGKKRPATPW 885 KG ++ ++G ++ K G +K+ G I K S + + G VG NQ SLGRA SK WLGKRPVVRGVVM P G G +AP G+K+P TPW Sbjct: 148 KGGQLARAAGAVAKLIAKEGKSATLKLPS-GEVRLISKNCSATVGQVGNVGVNQKSLGRAGSKRWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPTTPW 248 HSP 3 Score: 28.4906 bits (62), Expect = 6.275e-15 Identity = 16/27 (59.26%), Postives = 18/27 (66.67%), Query Frame = 3 Query: 879 PLGYPALGRRVEK-E*YSGNLIPSRRT 956 P GYPALGRR K YS +LI RR+ Sbjct: 247 PWGYPALGRRSRKRNKYSDSLILRRRS 273 The following BLAST results are available for this feature:
BLAST of EY711460 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY711460 ID=EY711460; Name=EY711460; organism=Citrus sinensis; type=EST; length=962bpback to top |