EY711434
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY711434 vs. ExPASy Swiss-Prot
Match: PABP5_HUMAN (Polyadenylate-binding protein 5 OS=Homo sapiens GN=PABPC5 PE=1 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 9.070e-44 Identity = 90/174 (51.72%), Postives = 120/174 (68.97%), Query Frame = 2 Query: 200 QFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVVVGHFLRKQER 721 ++L +LYVGDLD +VT+ LY F G + R+CRD TR LGYGYVN+ PADA AL+ +NF +N K R+M+S D +RKSG GNIFIKNLDKSID++AL FS+FGNILSCK+ D +G SKG+ +V F++ +A AI +NG+ +N++QV VG F +ER Sbjct: 14 KYLKAALYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNFDLINGKPFRLMWSQPDDRLRKSGVGNIFIKNLDKSIDNRALFYLFSAFGNILSCKVVCDDNG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEER 186 HSP 2 Score: 100.138 bits (248), Expect = 1.840e-20 Identity = 61/176 (34.66%), Postives = 99/176 (56.25%), Query Frame = 2 Query: 215 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRI----MYSHRDPSIR---KSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVVVGHFLRKQER 721 ++++ +LD ++ + L+ LFS G +LS +V D S GY YV++ + A A RA+ +N LNN+ + + R +R ++ N+F+KN+ ID + L + F +G S K+ D SG+SKGFGFV++E E+AQ A+ L+G I+ K + VG +K ER Sbjct: 107 NIFIKNLDKSIDNRALFYLFSAFGNILSCKVVCD--DNGSKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEERAAEVRTRDRATFTNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYETHEAAQKAVLDLHGKSIDGKVLYVGRAQKKIER 280 HSP 3 Score: 82.4185 bits (202), Expect = 3.971e-15 Identity = 56/183 (30.60%), Postives = 94/183 (51.37%), Query Frame = 2 Query: 212 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNK----------------------SIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVVV 694 T+++V ++ ++ D +L +LF + G SV+V RD S + S G+G+V Y A +A+ L+ ++ K +R+ R P + I+IKNLD++I+ + L + FSSFG+I K+ + GQ KGFG V F + E A A+D++NG ++ K + V Sbjct: 199 TNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGK-SKGFGFVRYETHEAAQKAVLDLHGKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVP------IYIKNLDETINDEKLKEEFSSFGSISRAKVMME-VGQGKGFGVVCFSSFEEATKAVDEMNGRIVGSKPLHV 373
BLAST of EY711434 vs. ExPASy Swiss-Prot
Match: PABP5_GORGO (Polyadenylate-binding protein 5 OS=Gorilla gorilla gorilla GN=PABPC5 PE=3 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 9.070e-44 Identity = 90/174 (51.72%), Postives = 120/174 (68.97%), Query Frame = 2 Query: 200 QFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVVVGHFLRKQER 721 ++L +LYVGDLD +VT+ LY F G + R+CRD TR LGYGYVN+ PADA AL+ +NF +N K R+M+S D +RKSG GNIFIKNLDKSID++AL FS+FGNILSCK+ D +G SKG+ +V F++ +A AI +NG+ +N++QV VG F +ER Sbjct: 14 KYLKAALYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNFDLINGKPFRLMWSQPDDRLRKSGVGNIFIKNLDKSIDNRALFYLFSAFGNILSCKVVCDDNG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEER 186 HSP 2 Score: 100.138 bits (248), Expect = 1.840e-20 Identity = 61/176 (34.66%), Postives = 99/176 (56.25%), Query Frame = 2 Query: 215 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRI----MYSHRDPSIR---KSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVVVGHFLRKQER 721 ++++ +LD ++ + L+ LFS G +LS +V D S GY YV++ + A A RA+ +N LNN+ + + R +R ++ N+F+KN+ ID + L + F +G S K+ D SG+SKGFGFV++E E+AQ A+ L+G I+ K + VG +K ER Sbjct: 107 NIFIKNLDKSIDNRALFYLFSAFGNILSCKVVCD--DNGSKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEERAAEVRTRDRATFTNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYETHEAAQKAVLDLHGKSIDGKVLYVGRAQKKIER 280 HSP 3 Score: 82.4185 bits (202), Expect = 3.971e-15 Identity = 56/183 (30.60%), Postives = 94/183 (51.37%), Query Frame = 2 Query: 212 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNK----------------------SIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVVV 694 T+++V ++ ++ D +L +LF + G SV+V RD S + S G+G+V Y A +A+ L+ ++ K +R+ R P + I+IKNLD++I+ + L + FSSFG+I K+ + GQ KGFG V F + E A A+D++NG ++ K + V Sbjct: 199 TNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGK-SKGFGFVRYETHEAAQKAVLDLHGKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVP------IYIKNLDETINDEKLKEEFSSFGSISRAKVMME-VGQGKGFGVVCFSSFEEATKAVDEMNGRIVGSKPLHV 373
BLAST of EY711434 vs. ExPASy Swiss-Prot
Match: PABPX_ARATH (Probable polyadenylate-binding protein At2g36660 OS=Arabidopsis thaliana GN=At2g36660 PE=2 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 1.710e-42 Identity = 83/181 (45.86%), Postives = 124/181 (68.51%), Query Frame = 2 Query: 179 AAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVVVGHFLRKQER 721 A+ + + +T SLYVGDL +VT+ LYD F++ + SVR+C+D S+ RSL YGY N+ + DA A++ N + LN K IR+M+S R P R++G GN+F+KNL +S+ + L D F FGNI+SCK+AT G+S+G+GFVQFE +++A AI LN ++ DK++ VG F++K +R Sbjct: 13 ASSSGSSSPVTASLYVGDLHPSVTEGILYDAFAEFKSLTSVRLCKDASSGRSLCYGYANFLSRQDANLAIEKKNNSLLNGKMIRVMWSVRAPDARRNGVGNVFVKNLPESVTNAVLQDMFKKFGNIVSCKVATLEDGKSRGYGFVQFEQEDAAHAAIQTLNSTIVADKEIYVGKFMKKTDR 193 HSP 2 Score: 99.7525 bits (247), Expect = 2.403e-20 Identity = 56/188 (29.79%), Postives = 103/188 (54.79%), Query Frame = 2 Query: 212 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRI----MYSHRDPSIRK------------SGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVVVGHFLRKQEREL 727 T+LY+ +LD +V++ L + F++ G+++S+ + +D R GY +VN+ NP DA RA + +N T +K + + + R+ +R+ + NI++KN++ ++ + L FS G I S K+ D G+SKGFGFV F E A +A+ +G + + K + V +K++R++ Sbjct: 201 TNLYMKNLDADVSEDLLREKFAEFGKIVSLAIAKD-ENRLCRGYAFVNFDNPEDARRAAETVNGTKFGSKCLYVGRAQKKAEREQLLREQFKEKHEEQKMIAKVSNIYVKNVNVAVTEEELRKHFSQCGTITSTKLMCDEKGKSKGFGFVCFSTPEEAIDAVKTFHGQMFHGKPLYVAIAQKKEDRKM 387 HSP 3 Score: 93.2041 bits (230), Expect = 2.250e-18 Identity = 55/172 (31.98%), Postives = 91/172 (52.91%), Query Frame = 2 Query: 215 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRI--MYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVVVGHFLRKQERE 724 +++V +L +VT++ L D+F + G ++S +V L +S GYG+V + A A+ LN T + +K I + D + N+++KNLD + L + F+ FG I+S IA D + +G+ FV F+N E A+ A + +NG K + VG +K ERE Sbjct: 113 NVFVKNLPESVTNAVLQDMFKKFGNIVSCKVAT-LEDGKSRGYGFVQFEQEDAAHAAIQTLNSTIVADKEIYVGKFMKKTDRVKPEEKYTNLYMKNLDADVSEDLLREKFAEFGKIVSLAIAKDENRLCRGYAFVNFDNPEDARRAAETVNGTKFGSKCLYVGRAQKKAERE 283
BLAST of EY711434 vs. ExPASy Swiss-Prot
Match: PABP_ENCCU (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Encephalitozoon cuniculi GN=PAB1 PE=1 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 6.530e-26 Identity = 66/163 (40.49%), Postives = 97/163 (59.51%), Query Frame = 2 Query: 215 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAI---DKLNGMLINDKQVVV 694 ++YVG+L DS L+ +FS VG+VLSV++ + S + +V + N DA RA+ L+N+ IR+M P TGNIF+KNL + K L D FS FG I+SCK+AT G+SKG+GFVQF+ K++A+ I L+G+L+ ++VV Sbjct: 15 TIYVGELSPKTLDSDLFRVFSNVGKVLSVKLIKRAEPVSS--FAFVTFENEEDAERAIREYKHYELHNRQIRVMKKDERPP----ETGNIFVKNLPEDFTGKDLDDAFSMFGEIVSCKVATTSHGKSKGYGFVQFKEKKAAKKVIKNFSSLDGLLLGGNRIVV 171 HSP 2 Score: 70.4774 bits (171), Expect = 1.561e-11 Identity = 50/162 (30.86%), Postives = 77/162 (47.53%), Query Frame = 2 Query: 209 TTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSI---RIMYSHRDPSIRKSGTG-------NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNG 664 T +++V +L + T L D FS G+++S +V S +S GYG+V + A + + NF+ L+ + RI+ +P I+K + N FIKN L + +G + S +G+ KGF F FEN ESA NAI L+G Sbjct: 95 TGNIFVKNLPEDFTGKDLDDAFSMFGEIVSCKVATT-SHGKSKGYGFVQFKEKKAAKKVIK--NFSSLDGLLLGGNRIVVELYNPEIKKGESKKTSATFTNCFIKNFPFDASEAELLELLERYGKVTSLFFPVKDNGKPKGFAFANFENHESALNAIKNLHG 253
BLAST of EY711434 vs. ExPASy Swiss-Prot
Match: PES4_YEAST (Protein PES4 OS=Saccharomyces cerevisiae GN=PES4 PE=2 SV=2) HSP 1 Score: 115.546 bits (288), Expect = 4.233e-25 Identity = 62/173 (35.84%), Postives = 101/173 (58.38%), Query Frame = 2 Query: 218 LYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNL---DKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVVVGHFLRKQEREL 727 L++GDL VT+ L +F + +S +VC D T++SLG+GY+N+ + +A +A++ LN+T +N K IRIM S R+ + RK+ N+F NL + + + +DTFS +G ILSCK+ K GFV FE++++A+N I N K+++ G K+ R + Sbjct: 93 LFIGDLHETVTEETLKGIFKKYPSFVSAKVCLDSVTKKSLGHGYLNFEDKEEAEKAMEELNYTKVNGKEIRIMPSLRNTTFRKNFGTNVFFSNLPLNNPLLTTRVFYDTFSRYGKILSCKL-----DSRKDIGFVYFEDEKTARNVIKMYNNTSFFGKKILCGIHFDKEVRSV 260
BLAST of EY711434 vs. ExPASy Swiss-Prot
Match: SAP49_SCHPO (Spliceosome-associated protein 49 OS=Schizosaccharomyces pombe GN=sap49 PE=2 SV=2) HSP 1 Score: 111.694 bits (278), Expect = 6.112e-24 Identity = 54/168 (32.14%), Postives = 99/168 (58.93%), Query Frame = 2 Query: 215 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSC-KIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVVVGHFLRKQ 715 ++Y+G+LD VTDS L++L Q G V+++ + RD G+G+ + + D A +LN L K IR+ + +D + N+F+ NLD +D + L+DTFS+ G ++ ++A D +G+SKG+GFV +++ E+A AI+ +N + +K + V + +++ Sbjct: 12 TIYLGNLDEKVTDSILFELCLQAGPVVNIHIPRDRVRNSHNGFGFCEFLHEQDVEYACQILNQVKLFGKPIRVNRASQDRGVNTLIGANLFVGNLDPLVDERVLYDTFSALGQLVKAPQVARDENGRSKGYGFVSYDSFETADAAIEAMNNQFLMNKPITVSYAFKRE 179
BLAST of EY711434 vs. ExPASy Swiss-Prot
Match: ELAV_DROVI (Protein elav OS=Drosophila virilis GN=elav PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 7.982e-24 Identity = 69/199 (34.67%), Postives = 109/199 (54.77%), Query Frame = 2 Query: 125 MAQIQVQHQAQMSGPNGVAAGA----SGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLST-------------RRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSG--QSKGFGFVQFENKESAQNAIDKLNG 664 + Q QVQ Q Q + NG + GA +G+ T+L V L +T+ ++ LFS VG++ SV++ RD S +SLGYG+VNY P DA +A++VLN L NK+I++ ++ PS N+++ L K++ + L F+ FG I++ +I + Q+KG GF++F+ +E A AI LNG Sbjct: 152 VVQQQVQQQVQQANTNGNSGGAQNGSNGSTETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGYGFVNYVRPQDAEQAVNVLNGLRLQNKTIKVSFAR--PSSDAIKGANLYVSGLPKTMTQQELEAIFAPFGAIITSRILQNAGNDTQTKGVGFIRFDKREEATRAIIALNG 348
BLAST of EY711434 vs. ExPASy Swiss-Prot
Match: ELAV3_MOUSE (ELAV-like protein 3 OS=Mus musculus GN=Elavl3 PE=1 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 7.982e-24 Identity = 60/168 (35.71%), Postives = 96/168 (57.14%), Query Frame = 2 Query: 167 PNGVAAGASG-NQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATD-GSGQSKGFGFVQFENKESAQNAIDKLNG 664 PNG G +G T+L V L N+T + LF +G + S ++ RD T +SLGYG+VNY++P DA +A++ LN L K+I++ Y+ PS N+++ L K++ K + FS +G I++ +I D +G S+G GF++F+ + A+ AI LNG Sbjct: 23 PNGPLLGTNGATDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADKAINTLNGLKLQTKTIKVSYAR--PSSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIITSRILLDQATGVSRGVGFIRFDKRIEAEEAIKGLNG 188
BLAST of EY711434 vs. ExPASy Swiss-Prot
Match: ELAV3_HUMAN (ELAV-like protein 3 OS=Homo sapiens GN=ELAVL3 PE=1 SV=3) HSP 1 Score: 110.923 bits (276), Expect = 1.043e-23 Identity = 60/168 (35.71%), Postives = 96/168 (57.14%), Query Frame = 2 Query: 167 PNGVAAGASG-NQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAIDKLNG 664 PNG G +G T+L V L N+T + LF +G + S ++ RD T +SLGYG+VNY++P DA +A++ LN L K+I++ Y+ PS N+++ L K++ K + FS +G I++ +I D +G S+G GF++F+ + A+ AI LNG Sbjct: 23 PNGPLLGTNGATDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADKAINTLNGLKLQTKTIKVSYAR--PSSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNG 188
BLAST of EY711434 vs. ExPASy Swiss-Prot
Match: SF3B4_DICDI (Splicing factor 3B subunit 4 OS=Dictyostelium discoideum GN=sf3b4 PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.362e-23 Identity = 63/170 (37.06%), Postives = 98/170 (57.65%), Query Frame = 2 Query: 218 LYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNIL-SCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVVVGHFLRKQERE 724 L + DLD VT+S L +LF Q V+ V + +D T++ G YV + + +DA AL V+ F L NK I+I ++D + N+FI NLD +D + LHDTFS FG I+ + K+ D +G SKGF F+ F++ E++ AI+ +N + +K + V + +K E Sbjct: 15 LLIRDLDPMVTESLLMELFIQAAPVVKVFIPKDKLTQQHSGRAYVEFQSSSDAEYALKVMKFVRLFNKEIKIKKENKD---KVDIGANLFIGNLDADVDERILHDTFSRFGTIIFTPKVMRDENGVSKGFAFINFDSFEASDAAIEAMNSQFLCNKPISVTYARKKDSNE 181 The following BLAST results are available for this feature:
BLAST of EY711434 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 168
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY711434 ID=EY711434; Name=EY711434; organism=Citrus sinensis; type=EST; length=927bpback to top |