EY711433

Overview
NameEY711433
Unique NameEY711433
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length871
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY711433 vs. ExPASy Swiss-Prot
Match: MYB48_ARATH (Transcription factor MYB48 OS=Arabidopsis thaliana GN=MYB48 PE=2 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 4.723e-31
Identity = 68/175 (38.86%), Postives = 102/175 (58.29%), Query Frame = 1
Query:  106 GIKKGPWTPEEDIILVSYIQEHGPGNWRSVPTNTGLLRCSKSCRLRWTNYLRPGIKRGNFTPHEEGMIIHLQALLGNKWAAIASYLPQRTDNDIKNYWNTHLKKKLKKFQSAALEPHMPQD--SSATSNNTHPFASKTGNSFSNERRS---LDFSNQAASNNNLRLQQQGSSYAS 615
            G +KGPWT +EDI+LV+++   G   W  +   +GL R  KSCRLRW NYL PG+KRG  TP EE +++ L A  GN+W+ IA  LP RTDN+IKNYW TH++KK ++ +     P  P    S+ +S++     + T ++  + R+S   + F +   S +   + Q+     S
Sbjct:    6 GNRKGPWTEQEDILLVNFVHLFGDRRWDFIAKVSGLNRTGKSCRLRWVNYLHPGLKRGKMTPQEERLVLELHAKWGNRWSKIARKLPGRTDNEIKNYWRTHMRKKAQEKK----RPVSPTSSFSNCSSSSVTTTTTNTQDTSCHSRKSSGEVSFYDTGGSRSTREMNQENEDVYS 176          
BLAST of EY711433 vs. ExPASy Swiss-Prot
Match: MYB90_ARATH (Transcription factor MYB90 OS=Arabidopsis thaliana GN=MYB90 PE=1 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 8.056e-31
Identity = 59/105 (56.19%), Postives = 72/105 (68.57%), Query Frame = 1
Query:  106 GIKKGPWTPEEDIILVSYIQEHGPGNWRSVPTNTGLLRCSKSCRLRWTNYLRPGIKRGNFTPHEEGMIIHLQALLGNKWAAIASYLPQRTDNDIKNYWNTHLKKK 420
            G++KG WT EED +L   I ++G G W  VP   GL RC KSCRLRW NYL+P IKRG  +  E  +++ L  LLGN+W+ IA  LP RT ND+KNYWNTHL KK
Sbjct:    7 GLRKGAWTAEEDSLLRLCIDKYGEGKWHQVPLRAGLNRCRKSCRLRWLNYLKPSIKRGRLSNDEVDLLLRLHKLLGNRWSLIAGRLPGRTANDVKNYWNTHLSKK 111          
BLAST of EY711433 vs. ExPASy Swiss-Prot
Match: MYBA2_ORYSJ (Myb-related protein MYBAS2 OS=Oryza sativa subsp. japonica GN=MYBAS2 PE=2 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.374e-30
Identity = 63/130 (48.46%), Postives = 85/130 (65.38%), Query Frame = 1
Query:  109 IKKGPWTPEEDIILVSYIQEHGPGNWRSVPTNTGLLRCSKSCRLRWTNYLRPGIKRGNFTPHEEGMIIHLQALLGNKWAAIASYLPQRTDNDIKNYWNTHLKKKLKKFQSAALEPHMPQDSSATSNNTHP 498
            I+KGPWT +ED+ LV  ++  G   W  +   +GL R  KSCRLRW NYL PG+KRG  +PHEE +I+ L A  GN+W+ IA  LP RTDN+IKNYW TH++KK ++ + + + P     SS T  + HP
Sbjct:    8 IRKGPWTEQEDLQLVCTVRLFGERRWDFIAKVSGLNRTGKSCRLRWVNYLHPGLKRGRMSPHEERLILELHARWGNRWSRIARRLPGRTDNEIKNYWRTHMRKKAQE-RKSNMSP-SSSSSSLTYQSCHP 135          
BLAST of EY711433 vs. ExPASy Swiss-Prot
Match: LAF1_ARATH (Transcription factor LAF1 OS=Arabidopsis thaliana GN=LAF1 PE=1 SV=2)

HSP 1 Score: 132.88 bits (333), Expect = 2.344e-30
Identity = 76/181 (41.99%), Postives = 102/181 (56.35%), Query Frame = 1
Query:  112 KKGPWTPEEDIILVSYIQEHGPGNWRSVPTNTGLLRCSKSCRLRWTNYLRPGIKRGNFTPHEEGMIIHLQALLGNKWAAIASYLPQRTDNDIKNYWNTHLKKKLKKFQSAALEPHMPQDSSATSN-----NTHPFASKTGNSFSNERRSLDFSNQAASNNNLRLQQQGSSYASSTENISRL 639
            +KG W+PEED  L S+I  +G   W +VP   GL R  KSCRLRW NYLRPG+KR   +  EE  I+   + LGNKW+ IA +LP RTDN+IKNYW++HLKKK  K QS      +   SS++S+       +P    + + FS +R   + S+  +  +N       S   SS   I RL
Sbjct:   11 RKGLWSPEEDEKLRSFILSYGHSCWTTVPIKAGLQRNGKSCRLRWINYLRPGLKRDMISAEEEETILTFHSSLGNKWSQIAKFLPGRTDNEIKNYWHSHLKKKWLKSQSLQDAKSISPPSSSSSSLVACGKRNPETLISNHVFSFQRLLENKSSSPSQESN----GNNSHQCSSAPEIPRL 187          
BLAST of EY711433 vs. ExPASy Swiss-Prot
Match: MYBA1_ORYSJ (Myb-related protein MYBAS1 OS=Oryza sativa subsp. japonica GN=MYBAS1 PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 2.194e-28
Identity = 63/146 (43.15%), Postives = 86/146 (58.90%), Query Frame = 1
Query:  109 IKKGPWTPEEDIILVSYIQEHGPGNWRSVPTNTGLLRCSKSCRLRWTNYLRPGIKRGNFTPHEEGMIIHLQALLGNKWAAIASYLPQRTDNDIKNYWNTHLKKKLKKFQSAALEPHMPQDSSATSN---NTHPFASKTGNSFSNER 537
            ++KGPWT +ED+ LV  ++  G   W  V   +GL R  KSCRLRW NYL PG+K G  +P EE +II L A  GN+W+ IA  LP RTDN+IKNYW TH++KK ++ +   + P     S    +   +T P  S  G    ++R
Sbjct:    8 MRKGPWTEQEDLQLVCTVRLFGDRRWDFVAKVSGLNRTGKSCRLRWVNYLHPGLKHGRMSPKEEHLIIELHARWGNRWSRIARRLPGRTDNEIKNYWRTHMRKKAQE-RRGDMSPSSSSSSLVYQSCLLDTVPIISMDGGDIHDDR 152          
BLAST of EY711433 vs. ExPASy Swiss-Prot
Match: MY104_ARATH (Transcription factor MYB104 OS=Arabidopsis thaliana GN=MYB104 PE=2 SV=2)

HSP 1 Score: 112.849 bits (281), Expect = 2.510e-24
Identity = 60/172 (34.88%), Postives = 85/172 (49.42%), Query Frame = 1
Query:  115 KGPWTPEEDIILVSYIQEHGPGNWRSVPTNTGLLRCSKSCRLRWTNYLRPGIKRGNFTPHEEGMIIHLQALLGNKWAAIASYLPQRTDNDIKNYWNTHLKKKLKKFQSAALEPHMPQDSSATSNNTHPFASKTGNSFSNERRSLDFSNQAASNNNLRLQQQGSSYASSTENI 630
            K  W PEED IL  Y+ ++G   W  VP  TGL     SCR RW N+L+P +K+G FT  EE  ++ L A+LGNKW+ +A   P RTDN+IKN+WN   + +LK          + + +  T+             +S +        +    NNL L Q    Y S+  N+
Sbjct:   18 KSKWKPEEDRILKDYVIQYGDRTWTHVPKRTGLPHNPASCRFRWMNHLKPSLKKGPFTDEEEKRVLQLHAVLGNKWSQMAREFPGRTDNEIKNFWNAR-RMRLKGKGLPVYPDEVREQAIRTAAQYGVKVELLNAHYSQDSLMAGNVEKPQELNNLALNQCSPYYQSTLANV 188          
BLAST of EY711433 vs. ExPASy Swiss-Prot
Match: MB3R1_ARATH (Myb-related protein 3R-1 OS=Arabidopsis thaliana GN=MYB3R-1 PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 8.927e-22
Identity = 45/111 (40.54%), Postives = 69/111 (62.16%), Query Frame = 1
Query:  115 KGPWTPEEDIILVSYIQEHGPGNWRSVPTNTGLLRCSKSCRLRWTNYLRPGIKRGNFTPHEEGMIIHLQALLGNKWAAIASYLPQRTDNDIKNYWNTHLKKKLKKFQSAAL 447
            KGPW+ EED  ++  ++++GP  W ++  +    R  K CR RW N+L PGI +  +T  EE  +I    + GNKWA +  +LP R+DN IKN+WN+ +KKKL  + ++ L
Sbjct:   87 KGPWSKEEDNTIIDLVEKYGPKKWSTISQHLPG-RIGKQCRERWHNHLNPGINKNAWTQEEELTLIRAHQIYGNKWAELMKFLPGRSDNSIKNHWNSSVKKKLDSYYASGL 196          
BLAST of EY711433 vs. ExPASy Swiss-Prot
Match: MYBA_MOUSE (Myb-related protein A OS=Mus musculus GN=Mybl1 PE=2 SV=2)

HSP 1 Score: 101.679 bits (252), Expect = 5.786e-21
Identity = 52/141 (36.88%), Postives = 81/141 (57.45%), Query Frame = 1
Query:  115 KGPWTPEEDIILVSYIQEHGPGNWRSVPTNTGLLRCSKSCRLRWTNYLRPGIKRGNFTPHEEGMIIHLQALLGNKWAAIASYLPQRTDNDIKNYWNTHLKKKLKKFQSAALEPHMPQDSSATSNNTHPFAS----KTGNSF 525
            KGPWT EED  ++  +Q++GP  W  +  +    R  K CR RW N+L P +K+ ++T  E+ +I      LGN+WA IA  LP RTDN IKN+WN+ +++K++  Q   L+  +  + S++     P A+    +T N F
Sbjct:   87 KGPWTKEEDQRVIELVQKYGPKRWSLIAKHLKG-RIGKQCRERWHNHLNPEVKKSSWTEEEDRIIYEAHKRLGNRWAEIAKLLPGRTDNSIKNHWNSTMRRKVE--QEGYLQDGIKSERSSSKLQHKPCATMDHLQTQNQF 224          
BLAST of EY711433 vs. ExPASy Swiss-Prot
Match: MYBA_HUMAN (Myb-related protein A OS=Homo sapiens GN=MYBL1 PE=1 SV=2)

HSP 1 Score: 101.679 bits (252), Expect = 5.786e-21
Identity = 52/141 (36.88%), Postives = 81/141 (57.45%), Query Frame = 1
Query:  115 KGPWTPEEDIILVSYIQEHGPGNWRSVPTNTGLLRCSKSCRLRWTNYLRPGIKRGNFTPHEEGMIIHLQALLGNKWAAIASYLPQRTDNDIKNYWNTHLKKKLKKFQSAALEPHMPQDSSATSNNTHPFAS----KTGNSF 525
            KGPWT EED  ++  +Q++GP  W  +  +    R  K CR RW N+L P +K+ ++T  E+ +I      LGN+WA IA  LP RTDN IKN+WN+ +++K++  Q   L+  +  + S++     P A+    +T N F
Sbjct:   87 KGPWTKEEDQRVIELVQKYGPKRWSLIAKHLKG-RIGKQCRERWHNHLNPEVKKSSWTEEEDRIIYEAHKRLGNRWAEIAKLLPGRTDNSIKNHWNSTMRRKVE--QEGYLQDGIKSERSSSKLQHKPCAAMDHMQTQNQF 224          
BLAST of EY711433 vs. ExPASy Swiss-Prot
Match: MYB_AVIMB (Transforming protein Myb OS=Avian myeloblastosis virus GN=V-MYB PE=1 SV=2)

HSP 1 Score: 101.293 bits (251), Expect = 7.557e-21
Identity = 47/122 (38.52%), Postives = 74/122 (60.66%), Query Frame = 1
Query:  109 IKKGPWTPEEDIILVSYIQEHGPGNWRSVPTNTGLLRCSKSCRLRWTNYLRPGIKRGNFTPHEEGMIIHLQALLGNKWAAIASYLPQRTDNDIKNYWNTHLKKKLKKFQSAALEPHMPQDSS 474
            + KGPWT EED  ++ ++Q++GP  W  +  +    R  K CR RW N+L P +K+ ++T  E+ +I      LGN+WA IA  LP RTDN +KN+WN+ +++K++       +   PQ+SS
Sbjct:   19 LNKGPWTKEEDQRVIEHVQKYGPKRWSDIAKHLKG-RIGKQCRERWHNHLNPEVKKTSWTEEEDRIIYQAHKRLGNRWAEIAKLLPGRTDNAVKNHWNSTMRRKVE-------QEGYPQESS 132          
The following BLAST results are available for this feature:
BLAST of EY711433 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 71
Match NameE-valueIdentityDescription
MYB48_ARATH4.723e-3138.86Transcription factor MYB48 OS=Arabidopsis thaliana... [more]
MYB90_ARATH8.056e-3156.19Transcription factor MYB90 OS=Arabidopsis thaliana... [more]
MYBA2_ORYSJ1.374e-3048.46Myb-related protein MYBAS2 OS=Oryza sativa subsp. ... [more]
LAF1_ARATH2.344e-3041.99Transcription factor LAF1 OS=Arabidopsis thaliana ... [more]
MYBA1_ORYSJ2.194e-2843.15Myb-related protein MYBAS1 OS=Oryza sativa subsp. ... [more]
MY104_ARATH2.510e-2434.88Transcription factor MYB104 OS=Arabidopsis thalian... [more]
MB3R1_ARATH8.927e-2240.54Myb-related protein 3R-1 OS=Arabidopsis thaliana G... [more]
MYBA_MOUSE5.786e-2136.88Myb-related protein A OS=Mus musculus GN=Mybl1 PE=... [more]
MYBA_HUMAN5.786e-2136.88Myb-related protein A OS=Homo sapiens GN=MYBL1 PE=... [more]
MYB_AVIMB7.557e-2138.52Transforming protein Myb OS=Avian myeloblastosis v... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-007-F07-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY711433 ID=EY711433; Name=EY711433; organism=Citrus sinensis; type=EST; length=871bp
CCACGCGTCCGAAAAAGAATGACAAGAGATAGTGAAGCCAAATTATCATT
ATTATTATTCTTCGTAGTAGCGGCCATGGGAAGACCTCCTTGCTGTGATA
AAGTTGGAATCAAGAAAGGTCCATGGACCCCTGAAGAAGACATCATTTTA
GTTTCTTATATCCAAGAACATGGTCCAGGAAACTGGAGATCAGTGCCCAC
GAACACAGGGTTGTTAAGGTGCAGCAAAAGTTGCAGGCTTAGATGGACTA
ACTACCTCAGACCAGGCATCAAGAGAGGCAATTTCACTCCTCATGAAGAA
GGGATGATCATTCATTTGCAAGCTTTATTGGGTAACAAATGGGCAGCAAT
AGCTTCATATCTGCCACAAAGAACAGACAATGATATAAAGAACTATTGGA
ACACACATCTGAAGAAGAAGCTCAAGAAGTTTCAATCAGCAGCTTTGGAA
CCCCATATGCCTCAAGACTCATCAGCTACCAGTAATAATACTCACCCGTT
TGCGTCAAAGACAGGCAACAGCTTCAGTAATGAAAGAAGGAGCTTAGATT
TTTCCAACCAAGCCGCCTCAAATAATAATCTCAGGCTACAACAACAAGGC
AGCTCCTATGCTTCGAGCACAGAGAACATTTCCCGTCTGCTCGAAGGCTG
GATGAGATCATCACCAAAGACTAGTAGTAATAGTTCCAGCGCACTTCTGA
TCAAAGGAAATGGAATATTTTTGACAATAGAAGCATTGAGAATCGGTTGG
TACTTACAGGGCCGAAGAGGACCAGAGGGTGGTGGGGTGATTTGATTCAA
ATGAGAATTATATCATTTTGTCATTGAGCAGAATTGACAATGTGAATGGA
CAGGCCAGTACTGTGACTCAG
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