EY711380

Overview
NameEY711380
Unique NameEY711380
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length942
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY711380 vs. ExPASy Swiss-Prot
Match: CSLD2_ORYSI (Cellulose synthase-like protein D2 OS=Oryza sativa subsp. indica GN=CSLD2 PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 1.218e-35
Identity = 68/116 (58.62%), Postives = 94/116 (81.03%), Query Frame = 3
Query:  204 QIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKFLERFAYVNTTIYPLTAIPLLMYCTLPAVCLLTNKFIM 551
            ++GWIYGSVTED++TG++MH RGW+S+YC+ KR AF+G+APINL+DRL+QVLRWA GSVEI FSR+  +      ++KFL+R AY+N  IYP T+I L++YC LPA+ L + +FI+
Sbjct:  862 RVGWIYGSVTEDVVTGYRMHNRGWKSVYCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNALL--ASRKMKFLQRIAYLNVGIYPFTSIFLIVYCFLPALSLFSGQFIV 975          
BLAST of EY711380 vs. ExPASy Swiss-Prot
Match: CSLD4_ORYSJ (Cellulose synthase-like protein D4 OS=Oryza sativa subsp. japonica GN=CSLD4 PE=2 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 1.591e-35
Identity = 71/120 (59.17%), Postives = 95/120 (79.17%), Query Frame = 3
Query:  204 QIGWIYGSVTEDILTGFKMHARGWRSIYCM-PKRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKFLERFAYVNTTIYPLTAIPLLMYCTLPAVCLLTNKFIMPQV 560
            +IGWIYGSVTED++TG++MH RGWRS+YC+ P+R AF+G+APINL+DRL+QVLRWA GSVEI FSR+  ++     R+K L+R AY N  +YP T++ LL YC LPAV L + KFI+ ++
Sbjct:  894 RIGWIYGSVTEDVVTGYRMHNRGWRSVYCVTPRRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNALF--ASPRMKLLQRVAYFNAGMYPFTSVFLLAYCLLPAVSLFSGKFIVQRL 1011          
BLAST of EY711380 vs. ExPASy Swiss-Prot
Match: CSLD2_ARATH (Cellulose synthase-like protein D2 OS=Arabidopsis thaliana GN=CSLD2 PE=2 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 2.714e-35
Identity = 68/116 (58.62%), Postives = 93/116 (80.17%), Query Frame = 3
Query:  204 QIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKFLERFAYVNTTIYPLTAIPLLMYCTLPAVCLLTNKFIM 551
            +IGWIYGSVTED++TG++MH RGW+S+YC+ KR AF+G+APINL+DRL+QVLRWA GSVEI FSR+  +      ++K L+R AY+N  IYP T+I L++YC LPA+ L + +FI+
Sbjct:  837 RIGWIYGSVTEDVVTGYRMHNRGWKSVYCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNALL--ASSKMKILQRIAYLNVGIYPFTSIFLIVYCFLPALSLFSGQFIV 950          
BLAST of EY711380 vs. ExPASy Swiss-Prot
Match: CSLD3_ARATH (Cellulose synthase-like protein D3 OS=Arabidopsis thaliana GN=CSLD3 PE=1 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 4.630e-35
Identity = 68/116 (58.62%), Postives = 92/116 (79.31%), Query Frame = 3
Query:  204 QIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKFLERFAYVNTTIYPLTAIPLLMYCTLPAVCLLTNKFIM 551
            +IGWIYGSVTED++TG++MH RGW+S+YC+ KR AF+G+APINL+DRL+QVLRWA GSVEI FSR+   +     R+K L+R AY+N  IYP T+  L++YC LPA+ L + +FI+
Sbjct:  837 RIGWIYGSVTEDVVTGYRMHNRGWKSVYCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNAFF--ASPRMKILQRIAYLNVGIYPFTSFFLIVYCFLPALSLFSGQFIV 950          
BLAST of EY711380 vs. ExPASy Swiss-Prot
Match: CSLD1_ORYSJ (Cellulose synthase-like protein D1 OS=Oryza sativa subsp. japonica GN=CSLD1 PE=2 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 1.347e-34
Identity = 65/116 (56.03%), Postives = 93/116 (80.17%), Query Frame = 3
Query:  204 QIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKFLERFAYVNTTIYPLTAIPLLMYCTLPAVCLLTNKFIM 551
            ++GWIYGSVTED++TG++MH RGW+S+YC+  R AF+G+APINL+DRL+QVLRWA GSVEI FSR+  ++     ++K L+R AY+N  IYP T++ L++YC LPA+ L + +FI+
Sbjct:  817 RVGWIYGSVTEDVVTGYRMHNRGWKSVYCVTHRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNALF--ASSKMKVLQRIAYLNVGIYPFTSVFLIVYCFLPALSLFSGQFIV 930          
BLAST of EY711380 vs. ExPASy Swiss-Prot
Match: CSLD1_ORYSI (Cellulose synthase-like protein D1 OS=Oryza sativa subsp. indica GN=CSLD1 PE=2 SV=2)

HSP 1 Score: 147.132 bits (370), Expect = 1.347e-34
Identity = 65/116 (56.03%), Postives = 93/116 (80.17%), Query Frame = 3
Query:  204 QIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKFLERFAYVNTTIYPLTAIPLLMYCTLPAVCLLTNKFIM 551
            ++GWIYGSVTED++TG++MH RGW+S+YC+  R AF+G+APINL+DRL+QVLRWA GSVEI FSR+  ++     ++K L+R AY+N  IYP T++ L++YC LPA+ L + +FI+
Sbjct:  817 RVGWIYGSVTEDVVTGYRMHNRGWKSVYCVTHRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNALF--ASSKMKVLQRIAYLNVGIYPFTSVFLIVYCFLPALSLFSGQFIV 930          
BLAST of EY711380 vs. ExPASy Swiss-Prot
Match: CSLD6_ARATH (Putative cellulose synthase-like protein D6 OS=Arabidopsis thaliana GN=CSLD6 PE=3 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 2.298e-34
Identity = 68/115 (59.13%), Postives = 89/115 (77.39%), Query Frame = 3
Query:  207 IGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKFLERFAYVNTTIYPLTAIPLLMYCTLPAVCLLTNKFIM 551
            +GWIYGSVTED++TGF+MH +GWRS YC+ +  AF+GSAPINL+DRL+QVLRWA GSVEI FSR+  I+   G +LK L+R AY+N  IYP T+I +L YC LP + L +  F++
Sbjct:  673 VGWIYGSVTEDVVTGFRMHEKGWRSFYCVTEPDAFRGSAPINLTDRLHQVLRWATGSVEIFFSRNNAIF--AGPKLKLLQRIAYLNVGIYPFTSIFILTYCFLPPLSLFSGHFVV 785          
BLAST of EY711380 vs. ExPASy Swiss-Prot
Match: CSLD3_ORYSJ (Cellulose synthase-like protein D3 OS=Oryza sativa subsp. japonica GN=CSLD3 PE=2 SV=2)

HSP 1 Score: 143.665 bits (361), Expect = 1.489e-33
Identity = 67/119 (56.30%), Postives = 92/119 (77.31%), Query Frame = 3
Query:  204 QIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKFLERFAYVNTTIYPLTAIPLLMYCTLPAVCLLTNKFIMPQV 560
            ++GWIYGSVTED++TG++MH RGWRS+YC+ KR AF G+APINL+DRL+QVLRWA GSVEI FSR+    +    +L  L+R +Y+N  IYP T+I LL+YC +PA+ L +  FI+ ++
Sbjct:  836 RVGWIYGSVTEDVVTGYRMHNRGWRSVYCITKRDAFLGTAPINLTDRLHQVLRWATGSVEIFFSRNNA--FLASRKLMLLQRISYLNVGIYPFTSIFLLVYCFIPALSLFSGFFIVQKL 952          
BLAST of EY711380 vs. ExPASy Swiss-Prot
Match: CSLF7_ORYSJ (Probable mixed-linked glucan synthase 7 OS=Oryza sativa subsp. japonica GN=CSLF7 PE=1 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.541e-30
Identity = 62/109 (56.88%), Postives = 81/109 (74.31%), Query Frame = 3
Query:  207 IGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKFLERFAYVNTTIYPLTAIPLLMYCTLPAVCLL 533
            +GW+YG+VTED+ TGF MH RGWRS Y      AF+G+APINL+DRL+QVLRWA GS+EI FSR+  +  G   RL  L+R AY+NTT+YP T++ L+ YC  PA+ L+
Sbjct:  519 VGWVYGTVTEDVATGFCMHRRGWRSAYYAAAPDAFRGTAPINLADRLHQVLRWAAGSLEIFFSRNNALLAGGRRRLHPLQRAAYLNTTVYPFTSLFLMAYCLFPAIPLI 627          
BLAST of EY711380 vs. ExPASy Swiss-Prot
Match: CSLF8_ORYSJ (Probable mixed-linked glucan synthase 8 OS=Oryza sativa subsp. japonica GN=CSFL8 PE=2 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 6.475e-29
Identity = 56/122 (45.90%), Postives = 84/122 (68.85%), Query Frame = 3
Query:  207 IGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKFLERFAYVNTTIYPLTAIPLLMYCTLPAVCLLTNKFIMPQVFNHY 572
            +GW+Y   TED++TGF++H  GWRS+YC  +  AF+G+APINL++RL Q+LRW+ GS+E+ FS +CP+    G RL F++R AY+N T YP+T++ LL Y   P + +    F + + F  Y
Sbjct:  567 VGWVYNIATEDVVTGFRLHRTGWRSMYCRMEPDAFRGTAPINLTERLYQILRWSGGSLEMFFSHNCPLL--AGRRLNFMQRIAYINMTGYPVTSVFLLFYLLFPVIWIFRGIFYIQKPFPTY 686          
The following BLAST results are available for this feature:
BLAST of EY711380 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 65
Match NameE-valueIdentityDescription
CSLD2_ORYSI1.218e-3558.62Cellulose synthase-like protein D2 OS=Oryza sativa... [more]
CSLD4_ORYSJ1.591e-3559.17Cellulose synthase-like protein D4 OS=Oryza sativa... [more]
CSLD2_ARATH2.714e-3558.62Cellulose synthase-like protein D2 OS=Arabidopsis ... [more]
CSLD3_ARATH4.630e-3558.62Cellulose synthase-like protein D3 OS=Arabidopsis ... [more]
CSLD1_ORYSJ1.347e-3456.03Cellulose synthase-like protein D1 OS=Oryza sativa... [more]
CSLD1_ORYSI1.347e-3456.03Cellulose synthase-like protein D1 OS=Oryza sativa... [more]
CSLD6_ARATH2.298e-3459.13Putative cellulose synthase-like protein D6 OS=Ara... [more]
CSLD3_ORYSJ1.489e-3356.30Cellulose synthase-like protein D3 OS=Oryza sativa... [more]
CSLF7_ORYSJ1.541e-3056.88Probable mixed-linked glucan synthase 7 OS=Oryza s... [more]
CSLF8_ORYSJ6.475e-2945.90Probable mixed-linked glucan synthase 8 OS=Oryza s... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-007-A12-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY711380 ID=EY711380; Name=EY711380; organism=Citrus sinensis; type=EST; length=942bp
CACTGGTCATATCTTGTCACTATNCCGGAATTCTTACGTCGACCCACGCG
TCCGCCCACGCGTTCTCCTATTATAATTCCAGTTCATCTGTAAATAATAT
GGCACACCCACCAACACACATTTCTTATTGAAGAAATAACTTGCATTCTC
TTTGTTATCATTTCAGTTTCTCTTGCAAACACCGATTTTTGTCTCTTGCT
CTGCAGATAGGATGGATTTATGGTTCTGTTACGGAAGATATTCTTACAGG
ATTCAAGATGCATGCCCGTGGTTGGCGGTCAATTTACTGCATGCCTAAGC
GCCCAGCCTTTAAAGGGTCTGCTCCTATTAATCTTTCAGATCGTCTAAAC
CAAGTGCTTCGGTGGGCTCTAGGTTCTGTGGAAATTCTTTTCAGTCGGCA
CTGTCCTATCTGGTATGGTTATGGTGGTCGATTGAAATTTCTTGAGAGGT
TTGCTTATGTGAACACCACTATCTATCCTCTCACTGCAATTCCTCTTCTC
ATGTATTGCACGCTGCCAGCTGTCTGTCTATTAACGAACAAGTTCATTAT
GCCTCAGGTATTTAATCATTACAATTACATCACTAGTTCACTTTTCTAAT
ATTTCAAGTTTGTGAAAATAGACTTCATACCCTAAAATTCTTTTGGTTGG
CTCATTTTCTTGCAGATTACTAACCCTTGCCAGAATAGGGTTTATTTCTC
CTCTTTCTGTCCATCTTCGCCACTGGTATTCTGGAAAAGAAGTGGAGTGC
TGTTTGGAACCATGGATGGGTGGAAAACGAACAGTTCGGGGTATTGGCCG
CGTTTCATCCCTCTATTTGCTGGTTTCCAAGGTCTCCTCAAGTACTTGCT
GGAATTGAACCCAACTCCCCTGTCCCTTCAAGCCACTCGAGGAGAACGAG
ATTTTACTGGACTCATATGGTAAATGGAAAAACCTCCTTACT
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