EY711354
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY711354 vs. ExPASy Swiss-Prot
Match: ARD1_HUMAN (GTP-binding protein ARD-1 OS=Homo sapiens GN=TRIM23 PE=1 SV=1) HSP 1 Score: 51.9878 bits (123), Expect = 4.246e-12 Identity = 23/58 (39.66%), Postives = 34/58 (58.62%), Query Frame = 2 Query: 401 EFDRYTLNIWDVGGQRTIRSYWRNYFEQTDGLVWVVDSSDLRRLDDCKMELDNLLKEE 574 E+ IWDVGG+ +R W++Y+ T +V+VVDSS R+ + EL LL E+ Sbjct: 444 EYKNLKFTIWDVGGKHKLRPLWKHYYLNTQAVVFVVDSSHRDRISEAHSELAKLLTEK 501 HSP 2 Score: 40.4318 bits (93), Expect = 4.246e-12 Identity = 16/36 (44.44%), Postives = 26/36 (72.22%), Query Frame = 1 Query: 175 GLDNSGKTTIVLKINGEDTSVISPTLGFNIKTITYQ 282 GLD +GKTTI+ K+ ++ PT+GFN++T+ Y+ Sbjct: 411 GLDGAGKTTILFKLKQDEFMQPIPTIGFNVETVEYK 446
BLAST of EY711354 vs. ExPASy Swiss-Prot
Match: ARL11_HUMAN (ADP-ribosylation factor-like protein 11 OS=Homo sapiens GN=ARL11 PE=1 SV=1) HSP 1 Score: 54.6842 bits (130), Expect = 2.115e-11 Identity = 24/52 (46.15%), Postives = 36/52 (69.23%), Query Frame = 2 Query: 416 TLNIWDVGGQRTIRSYWRNYFEQTDGLVWVVDSSDLRRLDDCKMELDNLLKE 571 +L +WDVGGQ +R+ W++Y E TD LV+V+DS+D RL + EL +L + Sbjct: 58 SLTLWDVGGQAPLRASWKDYLEGTDILVYVLDSTDEARLPESAAELTEVLND 109 HSP 2 Score: 35.4242 bits (80), Expect = 2.115e-11 Identity = 21/61 (34.43%), Postives = 30/61 (49.18%), Query Frame = 1 Query: 580 LTNMFQCQKLSGASLLILXNKQDINGALTPTEIAKVLDXGAMDKTRHWKIVGCSAYTSEGL 762 LT + ++G L+L NKQ+ AL +I L + W++ GCSA T EGL Sbjct: 103 LTEVLNDPNMAGVPFLVLANKQEAPDALPLLKIRNRLSLERF-QDHCWELRGCSALTGEGL 162
BLAST of EY711354 vs. ExPASy Swiss-Prot
Match: ARD1_RAT (GTP-binding protein ARD-1 (Fragment) OS=Rattus norvegicus GN=Trim23 PE=2 SV=1) HSP 1 Score: 48.9062 bits (115), Expect = 3.428e-11 Identity = 22/58 (37.93%), Postives = 33/58 (56.90%), Query Frame = 2 Query: 401 EFDRYTLNIWDVGGQRTIRSYWRNYFEQTDGLVWVVDSSDLRRLDDCKMELDNLLKEE 574 E+ IWDVG + +R W++Y+ T +V+VVDSS R+ + EL LL E+ Sbjct: 424 EYKNLKFTIWDVGEKHKLRPLWKHYYLNTQAVVFVVDSSHRDRISEAHSELAKLLTEK 481 HSP 2 Score: 40.4318 bits (93), Expect = 3.428e-11 Identity = 16/36 (44.44%), Postives = 26/36 (72.22%), Query Frame = 1 Query: 175 GLDNSGKTTIVLKINGEDTSVISPTLGFNIKTITYQ 282 GLD +GKTTI+ K+ ++ PT+GFN++T+ Y+ Sbjct: 391 GLDGAGKTTILFKLKQDEFMQPIPTIGFNVETVEYK 426
BLAST of EY711354 vs. ExPASy Swiss-Prot
Match: ARL11_MOUSE (ADP-ribosylation factor-like protein 11 OS=Mus musculus GN=Arl11 PE=2 SV=1) HSP 1 Score: 52.373 bits (124), Expect = 4.656e-11 Identity = 22/52 (42.31%), Postives = 36/52 (69.23%), Query Frame = 2 Query: 416 TLNIWDVGGQRTIRSYWRNYFEQTDGLVWVVDSSDLRRLDDCKMELDNLLKE 571 +L +WD+GGQ +R+ W++Y E D LV+V+DS+D RL + EL +L++ Sbjct: 58 SLTLWDIGGQTQLRATWKDYLEGIDLLVYVLDSTDEARLPEAVAELKEVLED 109 HSP 2 Score: 36.5798 bits (83), Expect = 4.656e-11 Identity = 21/61 (34.43%), Postives = 30/61 (49.18%), Query Frame = 1 Query: 580 LTNMFQCQKLSGASLLILXNKQDINGALTPTEIAKVLDXGAMDKTRHWKIVGCSAYTSEGL 762 L + + ++G L+L NKQ+ GAL EI L K W++ CSA T +GL Sbjct: 103 LKEVLEDPNMAGVPFLVLANKQEAPGALPLLEIRNRLGLEGFQK-HCWELRACSALTGQGL 162 The following BLAST results are available for this feature:
BLAST of EY711354 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 104
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Sequences
The
following sequences are available for this feature:
EST sequence >EY711354 ID=EY711354; Name=EY711354; organism=Citrus sinensis; type=EST; length=918bpback to top |