EY711350

Overview
NameEY711350
Unique NameEY711350
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length905
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY711350 vs. ExPASy Swiss-Prot
Match: ADH_STAEQ (Alcohol dehydrogenase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=adh PE=3 SV=1)

HSP 1 Score: 64.6994 bits (156), Expect = 7.818e-11
Identity = 40/129 (31.01%), Postives = 70/129 (54.26%), Query Frame = 1 
Query:  262 LKIQPFELPSLGPYDVLVRMKAVGICGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALE-PGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNV 645
            + I+   L  L P + LV+ +  G+C +D+H    ++ ADF     + +GHE  G + +V   V +L  GDRV++     +C  C++C  GR  LC ++   A   V G++A +V+  A+   K+P+N+
Sbjct:   12 VSIEEKRLRELKPGEALVKTEYCGVCHTDLH----VKNADFGDVTGVTLGHEGIGRVIEVADNVDSLKVGDRVSIAWMYAACGNCEYCTTGRETLCRDV-LNAGYTVDGAMAEEVIVDANYAVKVPENL 135

HSP 2 Score: 23.483 bits (49), Expect = 7.818e-11
Identity = 15/53 (28.30%), Postives = 25/53 (47.17%), Query Frame = 2 
Query:  737 IMGAGXIGLVTMLAARAFGAPXNVIGDGDDYPLSVAKEIGGN---NYVKIQPI 886
            + G G +G + +  A+       V  D +D  L+ AKE+G +   N   + PI
Sbjct:  167 VFGVGGLGNLALQYAKNVMGAKVVAFDINDDKLNFAKELGADAIINSTNVDPI 219
The following BLAST results are available for this feature:
BLAST of EY711350 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 251
Match NameE-valueIdentityDescription
ADH_STAEQ7.818e-1131.01Alcohol dehydrogenase OS=Staphylococcus epidermidi... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-006-F12-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY711350 ID=EY711350; Name=EY711350; organism=Citrus sinensis; type=EST; length=905bp
CCACGCGTCCGCCCACGCGTCCGCGGACGCGTGGGAAAAAGAACACTTGA
TGTTATGCTAAACTTGTCATTAAATATTCCTGCGACCGAATCAAATCATA
TCCAATATCCAGAATCAGATAGTGTACAGAGTGAAGTCTCTGCTGTGCAC
TTGTGTTTTGAAGGGTGAAAAGCAAATATGGGCAAAGGAGGGATGTCGCA
AGGAGAAAAGGAAGATGGAGAAGAAGTTAACATGGCAGCTTGGCTTATGG
GTGTCAACACCCTCAAGATTCAGCCTTTTGAGCTTCCTTCTCTGGGACCA
TATGATGTTTTAGTCAGGATGAAAGCCGTTGGTATTTGTGGAAGTGATGT
GCATTTTCTCAAGACCTTGAGGCTTGCCGATTTTGTAGTGAAAGAGCCTA
TGGTGATCGGGCATGAGTGTGCTGGGGTCATAGAGAAGGTGGGAAGCGAG
GTGAAGACTTTGGTGCCCGGTGACCGTGTGGCCCTGGAACCAGGGATCAG
CTGCTGGCGATGTGATCACTGCAAAGGAGGTCGATACAATTTGTGTCCAG
AGATGAAATTTTTTGCAACTCCGCCAGTTCATGGTTCTCTGGCTAATCAG
GTGGTGCATCCTGCAGACCTATGTTTTAAGCTGCCGGACAATGTGAGCCT
GGAGGAAGGGGCTATGTGTGAGCCCCTGAGTGTTGGTGTTCATGCTTGCC
GCCGTGCCAATATCGGTCCCTGAGACAAATGTGCTTATCATGGGTGCAGG
CNCCATAGGACTTGTCACAATGCTAGCAGCTCGTGCTTTTGGAGCTCCCA
NAAATGTCATTGGGGATGGGGATGACTATCCGTTATCTGTTGCAAAAGAA
ATTGGTGGAAATAATTATGTTAAGATTCAACCAATTGGCAGAAAATTATC
GCTCA
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