EY711316

Overview
NameEY711316
Unique NameEY711316
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length884
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY711316 vs. ExPASy Swiss-Prot
Match: CHI1_TOBAC (Endochitinase A OS=Nicotiana tabacum GN=CHN48 PE=1 SV=2)

HSP 1 Score: 128.257 bits (321), Expect = 5.906e-29
Identity = 57/146 (39.04%), Postives = 85/146 (58.22%), Query Frame = 2
Query:   23 YPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSKRGPNFGTTMNILYGESVCGQGDIDAMNNIVSHYLYYLDLLGVGREQAGPNEELSCAEQKAF 460
            +PC PG +Y+GRG I I  NYNYG  G A+  DLLN+P+ +  +  ++F++A+W WMTP +  +PS HD  +G W+P+  D  + R P FG   NI+ G   CG+G    + + +  Y  Y  +LGV      P + L C  Q++F
Sbjct:  181 WPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDPVISFKSALWFWMTP-QSPKPSCHDVIIGRWQPSAGDRAANRLPGFGVITNIINGGLECGRGTDSRVQDRIGFYRRYCSILGV-----SPGDNLDCGNQRSF 320          
BLAST of EY711316 vs. ExPASy Swiss-Prot
Match: CHIC_SOLLC (Basic 30 kDa endochitinase OS=Solanum lycopersicum GN=CHI9 PE=1 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 7.713e-29
Identity = 59/146 (40.41%), Postives = 83/146 (56.85%), Query Frame = 2
Query:   23 YPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSKRGPNFGTTMNILYGESVCGQGDIDAMNNIVSHYLYYLDLLGVGREQAGPNEELSCAEQKAF 460
            +PC PG +Y+GRG I I  NYNYG  G A+  DLLN+P+ +  +  ++F++AIW WMTP +  +PS HD   G W+P+  D  + R P FG   NI+ G   CG G    + + +  Y  Y  +LGV      P E L C  Q++F
Sbjct:  174 WPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDPVISFKSAIWFWMTP-QSPKPSCHDVITGRWQPSGADQAANRVPGFGVITNIINGGLECGHGSDSRVQDRIGFYRRYCGILGV-----SPGENLDCGNQRSF 313          
BLAST of EY711316 vs. ExPASy Swiss-Prot
Match: CHI2_TOBAC (Endochitinase B OS=Nicotiana tabacum GN=CHN50 PE=1 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 7.713e-29
Identity = 57/146 (39.04%), Postives = 85/146 (58.22%), Query Frame = 2
Query:   23 YPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSKRGPNFGTTMNILYGESVCGQGDIDAMNNIVSHYLYYLDLLGVGREQAGPNEELSCAEQKAF 460
            +PC PG +Y+GRG I I  NYNYG  G A+  DLLN+P+ +  +  ++F++A+W WMTP +  +PS HD  +G W+P+  D  + R P FG   NI+ G   CG+G    + + +  Y  Y  +LGV      P + L C  Q++F
Sbjct:  176 WPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDPVISFKSALWFWMTP-QSPKPSCHDVIIGRWQPSSADRAANRLPGFGVITNIINGGLECGRGTDSRVQDRIGFYRRYCSILGV-----SPGDNLDCGNQRSF 315          
BLAST of EY711316 vs. ExPASy Swiss-Prot
Match: CHI2_SOLTU (Endochitinase 2 (Fragment) OS=Solanum tuberosum GN=CHTB2 PE=2 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 7.713e-29
Identity = 58/146 (39.73%), Postives = 84/146 (57.53%), Query Frame = 2
Query:   23 YPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSKRGPNFGTTMNILYGESVCGQGDIDAMNNIVSHYLYYLDLLGVGREQAGPNEELSCAEQKAF 460
            +PC PG +Y+GRG I I  NYNYG  G A+  DLLN+P+ +  ++ ++F++AIW WMTP +  +PS HD   G W+P+  D  + R P FG   NI+ G   CG G    + + +  Y  Y  +LGV      P + L C  Q++F
Sbjct:  168 WPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDSIISFKSAIWFWMTP-QSPKPSCHDVITGRWQPSGTDQAANRVPGFGVITNIINGGLECGHGSDSRVQDRIGFYRRYCGILGV-----SPGDNLDCGNQRSF 307          
BLAST of EY711316 vs. ExPASy Swiss-Prot
Match: CHI3_SOLTU (Endochitinase 3 (Fragment) OS=Solanum tuberosum GN=CHTB3 PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 1.007e-28
Identity = 58/146 (39.73%), Postives = 84/146 (57.53%), Query Frame = 2
Query:   23 YPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSKRGPNFGTTMNILYGESVCGQGDIDAMNNIVSHYLYYLDLLGVGREQAGPNEELSCAEQKAF 460
            +PC PG +Y+GRG I I  NYNYG  G A+  DLLN+P+ +  ++ ++F++AIW WMTP +  +PS HD   G W+P+  D  + R P FG   NI+ G   CG G    + + +  Y  Y  +LGV      P + L C  Q++F
Sbjct:  170 WPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDSVISFKSAIWFWMTP-QSPKPSCHDVITGRWQPSGADQAANRVPGFGVITNIINGGLECGHGSDSRVQDRIGFYRRYCGILGV-----SPGDNLDCGNQRSF 309          
BLAST of EY711316 vs. ExPASy Swiss-Prot
Match: CHIT_CARPA (Endochitinase OS=Carica papaya PE=1 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.316e-28
Identity = 59/146 (40.41%), Postives = 83/146 (56.85%), Query Frame = 2
Query:   23 YPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSKRGPNFGTTMNILYGESVCGQGDIDAMNNIVSHYLYYLDLLGVGREQAGPNEELSCAEQKAF 460
            YPC PG  YYGRG + + WNYNYG  GEAL+ +LL +P+ +  +  L+F+ A+W WMTP +  +PS HD   G W+P+  DT + R P +G   N+L G   CG+G    + + +  +  Y  LLGV     G    L C  Q+ F
Sbjct:  103 YPCAPGKSYYGRGPLQLSWNYNYGPCGEALRVNLLGNPDLVATDRVLSFKTALWFWMTP-QAPKPSCHDVLTGRWQPSAADTAAGRLPGYGVLTNLLNGGLECGKGPNPQVADRLGFFRRYCGLLGV-----GTGNNLDCYNQRPF 242          
BLAST of EY711316 vs. ExPASy Swiss-Prot
Match: CHI2_ORYSJ (Chitinase 2 OS=Oryza sativa subsp. japonica GN=Cht2 PE=1 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.316e-28
Identity = 60/155 (38.71%), Postives = 89/155 (57.42%), Query Frame = 2
Query:   23 YPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSKRGPNFGTTMNILYGESVCGQGDIDAMNNIVSHYLYYLDLLGVGREQAGPNEELSCAEQKAFNPNTAPSAA 487
            +PC PG +YYGRG I + +N+NYG  G A+  DLL++P+ +  +AT++F+ A+W WMTP + ++PS+HD   G W P+  D  + R P +G   NI+ G   CG G  D + N +  Y  Y    G+G    G N  L C  Q+ FN  ++   A
Sbjct:  190 WPCAPGRKYYGRGPIQLSFNFNYGPAGRAIGVDLLSNPDLVATDATVSFKTALWFWMTP-QGNKPSSHDVITGRWAPSPADAAAGRAPGYGVITNIVNGGLECGHGPDDRVANRIGFYQRYCGAFGIG---TGGN--LDCYNQRPFNSGSSVGLA 338          
BLAST of EY711316 vs. ExPASy Swiss-Prot
Match: CHI1_SOLTU (Endochitinase 1 (Fragment) OS=Solanum tuberosum GN=CHTB1 PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.316e-28
Identity = 58/146 (39.73%), Postives = 84/146 (57.53%), Query Frame = 2
Query:   23 YPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSKRGPNFGTTMNILYGESVCGQGDIDAMNNIVSHYLYYLDLLGVGREQAGPNEELSCAEQKAF 460
            +PC PG +Y+GRG I I  NYNYG  G A+  DLLN+P+ +  ++ ++F++AIW WMTP +  +PS HD   G W+P+  D  + R P FG   NI+ G   CG G    + + +  Y  Y  +LGV      P + L C  Q++F
Sbjct:  170 WPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDSVISFKSAIWFWMTP-QSPKPSCHDVITGRWQPSGVDQAANRVPGFGVITNIINGGLECGHGSDSRVQDRIGFYRRYCGILGV-----SPGDNLDCGNQRSF 309          
BLAST of EY711316 vs. ExPASy Swiss-Prot
Match: CHIT_SOLTU (Endochitinase OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 3.828e-28
Identity = 58/151 (38.41%), Postives = 84/151 (55.63%), Query Frame = 2
Query:    8 PYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSKRGPNFGTTMNILYGESVCGQGDIDAMNNIVSHYLYYLDLLGVGREQAGPNEELSCAEQKAF 460
            P    +PC PG +Y+GRG I I  NYNYG  G A+  DLLN+P+ +  +  ++F+ A+W WMTP +  +PS HD  +G W P+  D  + R P FG   NI+ G   CG+G  + + + +  Y  Y  +LGV      P + L C  Q+ F
Sbjct:  175 PPSSQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDPVISFKTALWFWMTP-QSPKPSCHDVIIGRWNPSSADRAANRLPGFGVITNIINGGLECGRGTDNRVQDRIGFYRRYCSILGV-----TPGDNLDCVNQRWF 319          
BLAST of EY711316 vs. ExPASy Swiss-Prot
Match: CHI3_ORYSJ (Chitinase 3 OS=Oryza sativa subsp. japonica GN=Cht3 PE=2 SV=2)

HSP 1 Score: 125.561 bits (314), Expect = 3.828e-28
Identity = 59/152 (38.82%), Postives = 87/152 (57.24%), Query Frame = 2
Query:   14 KYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSKRGPNFGTTMNILYGESVCGQGDIDAMNNIVSHYLYYLDLLGVGREQAGPNEELSCAEQKAFNPN 469
            K  +PC  G +YYGRG I I +NYNYG  G+A+ +DLLN+P+ +  +AT++F+ A W WMTP +  +PS H    G W P+ +D  + R P +G   NI+ G   CG G  D + + +  Y  Y D+LGV        + L C  Q+ + P+
Sbjct:  175 KPEWPCAAGKKYYGRGPIQITYNYNYGPAGQAIGSDLLNNPDLVASDATVSFKTAFWFWMTP-QSPKPSCHAVITGQWTPSADDQAAGRVPGYGEITNIINGGVECGHGADDKVADRIGFYKRYCDMLGVSY-----GDNLDCYNQRPYPPS 320          
The following BLAST results are available for this feature:
BLAST of EY711316 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 54
Match NameE-valueIdentityDescription
CHI1_TOBAC5.906e-2939.04Endochitinase A OS=Nicotiana tabacum GN=CHN48 PE=1... [more]
CHIC_SOLLC7.713e-2940.41Basic 30 kDa endochitinase OS=Solanum lycopersicum... [more]
CHI2_TOBAC7.713e-2939.04Endochitinase B OS=Nicotiana tabacum GN=CHN50 PE=1... [more]
CHI2_SOLTU7.713e-2939.73Endochitinase 2 (Fragment) OS=Solanum tuberosum GN... [more]
CHI3_SOLTU1.007e-2839.73Endochitinase 3 (Fragment) OS=Solanum tuberosum GN... [more]
CHIT_CARPA1.316e-2840.41Endochitinase OS=Carica papaya PE=1 SV=1[more]
CHI2_ORYSJ1.316e-2838.71Chitinase 2 OS=Oryza sativa subsp. japonica GN=Cht... [more]
CHI1_SOLTU1.316e-2839.73Endochitinase 1 (Fragment) OS=Solanum tuberosum GN... [more]
CHIT_SOLTU3.828e-2838.41Endochitinase OS=Solanum tuberosum PE=2 SV=1[more]
CHI3_ORYSJ3.828e-2838.82Chitinase 3 OS=Oryza sativa subsp. japonica GN=Cht... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-006-C12-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY711316 ID=EY711316; Name=EY711316; organism=Citrus sinensis; type=EST; length=884bp
CCCGCGTCCGTACAAATACACATATCCCTGCACCCCTGGAGCTGAGTACT
ATGGCCGAGGTGCTATACCTATATACTGGAACTATAACTATGGAGCCACT
GGGGAAGCATTGAAGGCAGATCTGTTGAATCATCCCGAATACATTGAGCA
GAATGCTACCCTTGCCTTTGAGGCTGCAATTTGGAAGTGGATGACCCCAG
TCAAGAAATCCCAGCCTTCAGCCCATGATGCCTTTGTTGGCAACTGGAAG
CCCACCAAGAATGATACTTTGTCCAAACGGGGACCTAACTTTGGTACCAC
AATGAATATCCTCTATGGTGAGAGCGTATGCGGTCAGGGTGATATTGATG
CTATGAACAACATTGTCTCTCATTACTTGTATTACCTTGATCTGTTGGGT
GTTGGCCGAGAGCAGGCAGGACCTAATGAAGAACTCTCTTGTGCTGAGCA
GAAAGCCTTCAACCCAAACACCGCACCTTCAGCTGCATCTTCTTGAGGAC
GTTTATTGTAGCCAAGCTATTATTGTGGGAGTGACTCTCTCTCTCTCTCT
AGGTGGGTACCATTACAATAAGACTGGGGTTAATTAAACTATTTGTTGTT
AGTTTTTTTTTTTTTTCCATCTTTTCATATATTGCGCAAGGCCAATTACT
GTGTGGATTGGCCTGCCCCTCTTCATTGCCGTTGTAAATTTGAGATTCAT
TTGGGTTTGAAAAATCTCCGTTATATCTGGTTACTTATGTAATGATGACC
CGCATGAACCCCTCGGGTGTTTCAATACCAAAATTGCACAGGATTTGCCT
ATATTTTATTTATTCCGGGAAATCCACCTCCAGTTCCCTTCTAAAAAAAA
AAAAATAAAAAAAAAGGCGGCCCCTCTCAAAGGA
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