EY711316

Overview
NameEY711316
Unique NameEY711316
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length884
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY711316 vs. ExPASy Swiss-Prot
Match: CHIB_SOLLC (Acidic 27 kDa endochitinase OS=Solanum lycopersicum GN=CHI17 PE=1 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.657e-21
Identity = 49/141 (34.75%), Postives = 77/141 (54.61%), Query Frame = 2
Query:   38 GAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSKRGPNFGTTMNILYGESVCGQGDIDAMNNIVSHYLYYLDLLGVGREQAGPNEELSCAEQKAF 460
            G+ +YGRG I +    NY   G+A+  DL+N+P+ +  +AT++F+ AIW WMT  + ++PS HD   G W P+  D  + R P +G   NI+ G   CG+G    + + +  Y  Y  +L V      P + L C +Q+ F
Sbjct:  110 GSGFYGRGPIQLTGQSNYDLAGQAIGQDLVNNPDLVATDATVSFKTAIWFWMT-AQGNKPSCHDVITGQWTPSAADASANRQPGYGVITNIINGGIECGKGQNPQVEDRIGFYRRYCTILNV-----APGDNLDCYDQRNF 244          
BLAST of EY711316 vs. ExPASy Swiss-Prot
Match: CHI11_ORYSJ (Chitinase 11 OS=Oryza sativa subsp. japonica GN=Cht11 PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 7.731e-21
Identity = 51/139 (36.69%), Postives = 74/139 (53.24%), Query Frame = 2
Query:   47 YYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSKRGPNFGTTMNILYGESVCGQG-DIDAMNNIVSHYLYYLDLLGVGREQAGPNEELSCAEQKAF 460
            YYGRG I +   YNY   G+AL  DL+N+P+ +  +  +AF  AIW WMT  +  +PS HD     W P+ +D  S R P +G   NI+ G   CG+G   D   + V +Y  Y D+  VG       + ++C +QK +
Sbjct:  121 YYGRGPIQLTHKYNYQLAGDALGLDLVNNPDLVSSDPVVAFRTAIWFWMT-AQSPKPSCHDVITNQWTPSGDDRSSGRLPGYGMATNIINGGEECGKGYSTDNAKDRVGYYKRYCDMFRVGY-----GDNIACRDQKPY 253          
BLAST of EY711316 vs. ExPASy Swiss-Prot
Match: CHIA_SOLLC (Acidic 26 kDa endochitinase OS=Solanum lycopersicum GN=CHI3 PE=1 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.690e-18
Identity = 47/140 (33.57%), Postives = 72/140 (51.43%), Query Frame = 2
Query:   47 YYGRGAIPIYWNYNYGATGEALKA--DLLNHPEYIEQNATLAFEAAIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSKRGPNFGTTMNILYGESVCGQGDIDAMNNIVSHYLYYLDLLGVGREQAGPNEELSCAEQKAF 460
            YYGRG I +    NY   G+ +    +L+N+P+ +  +  ++F+ AIW WMT  + ++PS H+  +G W P+  DT + R P +G   NI+ G+  CG G   A  + +  Y  Y  +L V        E L C  QK F
Sbjct:  117 YYGRGPIQLTHQSNYERAGQGIGVGQELVNNPDLVATDPIISFKTAIWFWMTE-QDNKPSCHNVIIGQWTPSPKDTAANRVPGYGVITNIINGQFECGMGPNTAAESRIGFYRRYCGMLNV-----PTGENLDCNNQKNF 250          
BLAST of EY711316 vs. ExPASy Swiss-Prot
Match: CHIA_SOLCI (Acidic endochitinase pcht28 OS=Solanum chilense PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.328e-17
Identity = 47/140 (33.57%), Postives = 70/140 (50.00%), Query Frame = 2
Query:   47 YYGRGAIPIYWNYNYGATGEALKA--DLLNHPEYIEQNATLAFEAAIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSKRGPNFGTTMNILYGESVCGQGDIDAMNNIVSHYLYYLDLLGVGREQAGPNEELSCAEQKAF 460
            YYGRG I +    NY   G+ +    DL+N+P+ +  +  ++F  AIW WMT  + ++PS H+  +G W P+  DT + R P +G   NI+ G   C  G   A+ + +  Y  Y  +L V        E L C  QK F
Sbjct:  117 YYGRGPIQLTHQSNYERAGQGIGVGQDLVNNPDLVATDPIISFRTAIWFWMT-AQDNKPSCHNVIIGQWTPSPADTAANRVPGYGVITNIINGGLECNMGPNTAVESRIGFYRRYCGMLNV-----PTGENLDCNNQKNF 250          
BLAST of EY711316 vs. ExPASy Swiss-Prot
Match: CHI4_BRANA (Basic endochitinase CHB4 OS=Brassica napus PE=1 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 3.971e-17
Identity = 52/140 (37.14%), Postives = 67/140 (47.86%), Query Frame = 2
Query:   23 YPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSKRGPNFGTTMNILYGESVCGQGDIDAMNNIVSHYLYYLDLLGVGREQAGPNEELSC 442
            YPC PG  Y+GRG I + WNYNYGA G++L  +LL  PE +  N T+AF   +W WM  V               +P  N         FG T+  + G   C  G+  A+N  + +Y  Y   LGV     GPN  LSC
Sbjct:  157 YPCAPGKGYFGRGPIQLSWNYNYGACGQSLNLNLLGQPELVSSNPTVAFRTGLWFWMNSV---------------RPVLNQ-------GFGATIRAINGME-CNGGNSGAVNARIRYYRDYCGQLGV---DPGPN--LSC 268          
BLAST of EY711316 vs. ExPASy Swiss-Prot
Match: CHIB_POPTR (Acidic endochitinase WIN6.2B OS=Populus trichocarpa PE=2 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 1.155e-16
Identity = 49/130 (37.69%), Postives = 68/130 (52.31%), Query Frame = 2
Query:   74 YWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSKRGPNFGTTMNILYGESVCGQGDIDAMN-NIVSHYLYYLDLLGVGREQAGPNEELSCAEQKAF 460
            + NYNYG  G+ L   LL  PE +E +  +AF+ A+W WMTP +  +PS H     +W P+  D+ + R P +G   NI+ G   CGQG  +  N N +  Y  Y D LG      G N  L C +Q+ F
Sbjct:  169 HMNYNYGLCGDDLNLPLLQEPELVETDPFIAFKTALWFWMTP-QSPKPSCHAVITESWTPSAADSEAGRVPGYGVITNIINGGIECGQGGPNNANENRIGFYKTYCDSLGT---TYGSN--LDCYQQRPF 292          
BLAST of EY711316 vs. ExPASy Swiss-Prot
Match: CHIB_MAIZE (Endochitinase B (Fragment) OS=Zea mays PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 8.279e-15
Identity = 50/145 (34.48%), Postives = 64/145 (44.14%), Query Frame = 2
Query:    8 PYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSKRGPNFGTTMNILYGESVCGQGDIDAMNNIVSHYLYYLDLLGVGREQAGPNEELSC 442
            P K  +PC  G +YYGRG + I WNYNYG  G A+  D L  P  + ++A +AF+AA+W WM  V    P                        FG T   +     CG  +   MN  V +Y  Y   LGV     GPN  L+C
Sbjct:  152 PTKRQWPCAAGQKYYGRGPLQISWNYNYGPAGRAIGFDGLGDPGRVARDAVVAFKAALWFWMNSVHGVVPQ----------------------GFGATTRAMQRALECGGNNPAQMNARVGYYRQYCRQLGV---DPGPN--LTC 269          
BLAST of EY711316 vs. ExPASy Swiss-Prot
Match: CHI6_ORYSJ (Chitinase 6 OS=Oryza sativa subsp. japonica GN=Cht6 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 8.279e-15
Identity = 45/140 (32.14%), Postives = 66/140 (47.14%), Query Frame = 2
Query:   23 YPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSKRGPNFGTTMNILYGESVCGQGDIDAMNNIVSHYLYYLDLLGVGREQAGPNEELSC 442
            +PC  G  YYGRG + I WN+NYG  G+++  D L  P+ + ++  LAF+ A+W W   V       HDAFV              G  FG T+  + G   C   +  A++N V++Y  +    GV      P   L+C
Sbjct:  157 WPCMAGKGYYGRGPLQISWNFNYGPAGQSIGFDGLGDPDAVARSPVLAFQTALWYWTNNV-------HDAFVS-------------GQGFGATIRAINGALECDGKNPTAVSNRVAYYQQFCQQFGV-----DPGSNLTC 271          
BLAST of EY711316 vs. ExPASy Swiss-Prot
Match: AGI_URTDI (Lectin/endochitinase 1 OS=Urtica dioica GN=UDA1 PE=1 SV=3)

HSP 1 Score: 77.411 bits (189), Expect = 1.196e-13
Identity = 40/127 (31.50%), Postives = 68/127 (53.54%), Query Frame = 2
Query:   23 YPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSKRGPNFGTTMNILYGESVCGQGDIDAMNNIVSHYLYYLDLLGV 403
            +PC  G +Y  RG I +  N+NYG  G+A+  DL+ +P+ +E++  ++F+ A+W WM+    ++PS HD  +        ++ + R PN G   NI+      G  D    ++ +  Y  Y D+LGV
Sbjct:  228 WPCAAGKKYSPRGPIQLTHNFNYGLAGQAIGEDLIQNPDLVEKDPIISFKTALWFWMSQ-HDNKPSCHDIVL------NANSAANRIPNKGVIGNII--SRAFGHDDFAVRSSSIGFYKRYCDMLGV 345          
BLAST of EY711316 vs. ExPASy Swiss-Prot
Match: CHIP_BETVU (Acidic endochitinase SP2 OS=Beta vulgaris GN=SP2 PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.663e-13
Identity = 43/140 (30.71%), Postives = 60/140 (42.86%), Query Frame = 2
Query:   23 YPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSKRGPNFGTTMNILYGESVCGQGDIDAMNNIVSHYLYYLDLLGVGREQAGPNEELSC 442
            YPC  G +YYGRG + + WNYNY   G+A+  D L +PE +  +   +F+AA+W WMT V                       S     FG T   + G   C   + D  N+ +  Y  Y    GV      P + L+C
Sbjct:  176 YPCAAGKKYYGRGPLQLSWNYNYALAGQAIGFDGLGNPEKVATDVNTSFKAAMWFWMTNVH----------------------SVMNQGFGATTKAINGALECNGQNQDQANDRIQFYKKYCADFGV-----APGDNLTC 288          
The following BLAST results are available for this feature:
BLAST of EY711316 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 54
Match NameE-valueIdentityDescription
CHIB_SOLLC2.657e-2134.75Acidic 27 kDa endochitinase OS=Solanum lycopersicu... [more]
CHI11_ORYSJ7.731e-2136.69Chitinase 11 OS=Oryza sativa subsp. japonica GN=Ch... [more]
CHIA_SOLLC4.690e-1833.57Acidic 26 kDa endochitinase OS=Solanum lycopersicu... [more]
CHIA_SOLCI2.328e-1733.57Acidic endochitinase pcht28 OS=Solanum chilense PE... [more]
CHI4_BRANA3.971e-1737.14Basic endochitinase CHB4 OS=Brassica napus PE=1 SV... [more]
CHIB_POPTR1.155e-1637.69Acidic endochitinase WIN6.2B OS=Populus trichocarp... [more]
CHIB_MAIZE8.279e-1534.48Endochitinase B (Fragment) OS=Zea mays PE=1 SV=1[more]
CHI6_ORYSJ8.279e-1532.14Chitinase 6 OS=Oryza sativa subsp. japonica GN=Cht... [more]
AGI_URTDI1.196e-1331.50Lectin/endochitinase 1 OS=Urtica dioica GN=UDA1 PE... [more]
CHIP_BETVU2.663e-1330.71Acidic endochitinase SP2 OS=Beta vulgaris GN=SP2 P... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-006-C12-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY711316 ID=EY711316; Name=EY711316; organism=Citrus sinensis; type=EST; length=884bp
CCCGCGTCCGTACAAATACACATATCCCTGCACCCCTGGAGCTGAGTACT
ATGGCCGAGGTGCTATACCTATATACTGGAACTATAACTATGGAGCCACT
GGGGAAGCATTGAAGGCAGATCTGTTGAATCATCCCGAATACATTGAGCA
GAATGCTACCCTTGCCTTTGAGGCTGCAATTTGGAAGTGGATGACCCCAG
TCAAGAAATCCCAGCCTTCAGCCCATGATGCCTTTGTTGGCAACTGGAAG
CCCACCAAGAATGATACTTTGTCCAAACGGGGACCTAACTTTGGTACCAC
AATGAATATCCTCTATGGTGAGAGCGTATGCGGTCAGGGTGATATTGATG
CTATGAACAACATTGTCTCTCATTACTTGTATTACCTTGATCTGTTGGGT
GTTGGCCGAGAGCAGGCAGGACCTAATGAAGAACTCTCTTGTGCTGAGCA
GAAAGCCTTCAACCCAAACACCGCACCTTCAGCTGCATCTTCTTGAGGAC
GTTTATTGTAGCCAAGCTATTATTGTGGGAGTGACTCTCTCTCTCTCTCT
AGGTGGGTACCATTACAATAAGACTGGGGTTAATTAAACTATTTGTTGTT
AGTTTTTTTTTTTTTTCCATCTTTTCATATATTGCGCAAGGCCAATTACT
GTGTGGATTGGCCTGCCCCTCTTCATTGCCGTTGTAAATTTGAGATTCAT
TTGGGTTTGAAAAATCTCCGTTATATCTGGTTACTTATGTAATGATGACC
CGCATGAACCCCTCGGGTGTTTCAATACCAAAATTGCACAGGATTTGCCT
ATATTTTATTTATTCCGGGAAATCCACCTCCAGTTCCCTTCTAAAAAAAA
AAAAATAAAAAAAAAGGCGGCCCCTCTCAAAGGA
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