EY711311
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY711311 vs. ExPASy Swiss-Prot
Match: CESA1_ORYSJ (Probable cellulose synthase A catalytic subunit 1 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA1 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.810e-11 Identity = 56/231 (24.24%), Postives = 104/231 (45.02%), Query Frame = 1 Query: 10 RYCPFIYGH-GKIKFGAQMGYCNYLLWAPLSLPTLFYVIVPPLCLRHGISLFPKVSSLWFIPFAYVFVAQNAYSICEALSCGHKLKSWWNLQRMLIIRRTTAFFFGFVDCIVKQMGLSQTAFAITAKMVTEDVMERYEQEMMEFGSSSVMFTIVATLAMLNXXXXXXXXXXXXXXXXXXXGNLMCQIILCGLMVLVNVPIYEALFIRKDXGCMPFSVXVKSMFLASLACLL 699 R+CP YG+ G++K ++ Y N +++ S+P + Y ++P +CL + P++S+ + F +F + A I E G ++ WW ++ +I T+A F ++K + T F +T+K ED E+ F +S++ T+ ++N G L ++ ++L P + L R++ P V V S+ LAS+ LL Sbjct: 828 RHCPIWYGYNGRLKLLERLAYINTIVYPITSIPLIAYCVLPAICLLTNKFIIPEISNYAGMFFILLFASIFATGILELRWSGVGIEDWWRNEQFWVIGGTSAHLFAVFQGLLKVLAGIDTNFTVTSKASDED---GDFAELYVFKWTSLLIP-PTTVLVINLVGMVAGISYAINSGYQSWGPLFGKLFFSIWVILHLYPFLKGLMGRQNR--TPTIVIVWSILLASIFSLL 1052
BLAST of EY711311 vs. ExPASy Swiss-Prot
Match: CESA1_ORYSI (Probable cellulose synthase A catalytic subunit 1 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA1 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.810e-11 Identity = 56/231 (24.24%), Postives = 104/231 (45.02%), Query Frame = 1 Query: 10 RYCPFIYGH-GKIKFGAQMGYCNYLLWAPLSLPTLFYVIVPPLCLRHGISLFPKVSSLWFIPFAYVFVAQNAYSICEALSCGHKLKSWWNLQRMLIIRRTTAFFFGFVDCIVKQMGLSQTAFAITAKMVTEDVMERYEQEMMEFGSSSVMFTIVATLAMLNXXXXXXXXXXXXXXXXXXXGNLMCQIILCGLMVLVNVPIYEALFIRKDXGCMPFSVXVKSMFLASLACLL 699 R+CP YG+ G++K ++ Y N +++ S+P + Y ++P +CL + P++S+ + F +F + A I E G ++ WW ++ +I T+A F ++K + T F +T+K ED E+ F +S++ T+ ++N G L ++ ++L P + L R++ P V V S+ LAS+ LL Sbjct: 828 RHCPIWYGYNGRLKLLERLAYINTIVYPITSIPLIAYCVLPAICLLTNKFIIPEISNYAGMFFILLFASIFATGILELRWSGVGIEDWWRNEQFWVIGGTSAHLFAVFQGLLKVLAGIDTNFTVTSKASDED---GDFAELYVFKWTSLLIP-PTTVLVINLVGMVAGISYAINSGYQSWGPLFGKLFFSIWVILHLYPFLKGLMGRQNR--TPTIVIVWSILLASIFSLL 1052
BLAST of EY711311 vs. ExPASy Swiss-Prot
Match: CESA9_ORYSJ (Cellulose synthase A catalytic subunit 9 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA9 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.670e-11 Identity = 55/232 (23.71%), Postives = 101/232 (43.53%), Query Frame = 1 Query: 10 RYCPFIYGH--GKIKFGAQMGYCNYLLWAPLSLPTLFYVIVPPLCLRHGISLFPKVSSLWFIPFAYVFVAQNAYSICEALSCGHKLKSWWNLQRMLIIRRTTAFFFGFVDCIVKQMGLSQTAFAITAKMVTEDVMERYEQEMMEFGSSSVMFTIVATLAMLNXXXXXXXXXXXXXXXXXXXGNLMCQIILCGLMVLVNVPIYEALFIRKDXGCMPFSVXVKSMFLASLACLL 699 R+ P +YG+ G +K+ + Y N ++ SLP L Y +P +CL G + P +S+ + F +F++ A I E G ++ WW ++ +I +A F V ++K + T F +T+K ++ E E ++ + + TL +LN G L ++ +++ P + L R++ P V + S+ LAS+ LL Sbjct: 806 RHSPLLYGYKNGNLKWLERFSYINTTIYPFTSLPLLAYCTLPAVCLLTGKFIMPPISTFASLFFIALFISIFATGILEMRWSGVSIEEWWRNEQFWVIGGVSAHLFAVVQGLLKVLAGIDTNFTVTSKATGDEDDEFAELYAFKW---TTLLIPPTTLLILNIIGVVAGVSDAINNGSEAWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNR--TPTIVVIWSVLLASIFSLL 1032
BLAST of EY711311 vs. ExPASy Swiss-Prot
Match: CESA9_ORYSI (Cellulose synthase A catalytic subunit 9 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA9 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.670e-11 Identity = 55/232 (23.71%), Postives = 101/232 (43.53%), Query Frame = 1 Query: 10 RYCPFIYGH--GKIKFGAQMGYCNYLLWAPLSLPTLFYVIVPPLCLRHGISLFPKVSSLWFIPFAYVFVAQNAYSICEALSCGHKLKSWWNLQRMLIIRRTTAFFFGFVDCIVKQMGLSQTAFAITAKMVTEDVMERYEQEMMEFGSSSVMFTIVATLAMLNXXXXXXXXXXXXXXXXXXXGNLMCQIILCGLMVLVNVPIYEALFIRKDXGCMPFSVXVKSMFLASLACLL 699 R+ P +YG+ G +K+ + Y N ++ SLP L Y +P +CL G + P +S+ + F +F++ A I E G ++ WW ++ +I +A F V ++K + T F +T+K ++ E E ++ + + TL +LN G L ++ +++ P + L R++ P V + S+ LAS+ LL Sbjct: 806 RHSPLLYGYKNGNLKWLERFSYINTTIYPFTSLPLLAYCTLPAVCLLTGKFIMPPISTFASLFFIALFISIFATGILEMRWSGVSIEEWWRNEQFWVIGGVSAHLFAVVQGLLKVLAGIDTNFTVTSKATGDEDDEFAELYAFKW---TTLLIPPTTLLILNIIGVVAGVSDAINNGSEAWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNR--TPTIVVIWSVLLASIFSLL 1032
BLAST of EY711311 vs. ExPASy Swiss-Prot
Match: CESA7_ORYSJ (Cellulose synthase A catalytic subunit 7 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA7 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.670e-11 Identity = 52/231 (22.51%), Postives = 103/231 (44.59%), Query Frame = 1 Query: 10 RYCPFIYGHG-KIKFGAQMGYCNYLLWAPLSLPTLFYVIVPPLCLRHGISLFPKVSSLWFIPFAYVFVAQNAYSICEALSCGHKLKSWWNLQRMLIIRRTTAFFFGFVDCIVKQMGLSQTAFAITAKMVTEDVMERYEQEMMEFGSSSVMFTIVATLAMLNXXXXXXXXXXXXXXXXXXXGNLMCQIILCGLMVLVNVPIYEALFIRKDXGCMPFSVXVKSMFLASLACLL 699 R+CP Y +G ++K+ + Y N +++ S+P L Y +P +CL G + P +++L I F +F++ A + E G ++ WW ++ +I +A F ++K +G T F +T+K ++ E + ++ + + TL ++N G L ++ ++L P + L R++ P V + S+ LAS+ L+ Sbjct: 815 RHCPLWYAYGGRLKWLERFAYTNTIVYPFTSIPLLAYCTIPAVCLLTGKFIIPTLNNLASIWFIALFLSIIATGVLELRWSGVSIEDWWRNEQFWVIGGVSAHLFAVFQGLLKVLGGVDTNFTVTSKAAADETDAFGELYLFKW---TTLLVPPTTLIIINMVGIVAGVSDAVNNGYGSWGPLFGKLFFSFWVILHLYPFLKGLMGRQNR--TPTIVVLWSILLASIFSLV 1040
BLAST of EY711311 vs. ExPASy Swiss-Prot
Match: CESA4_ORYSJ (Cellulose synthase A catalytic subunit 4 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA4 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.794e-11 Identity = 60/237 (25.32%), Postives = 105/237 (44.30%), Query Frame = 1 Query: 10 RYCPFIYGHG--KIKFGAQMGYCNYLLWAPLSLPTLFYVIVPPLCLRHGISLFPKVSSLWFIPFAYVFVAQNAYSICEALSCGHKLKSWWNLQRMLIIRRTTAFFFGFVDCIVKQMGLSQTAFAITAKMVTEDVMERYEQEMMEFGSSSVM-FTIV----ATLAMLNXXXXXXXXXXXXXXXXXXXGNLMCQIILCGLMVLVNVPIYEALFIRKDXGCMPFSVXVKSMFLASLACLL 699 R+CP YG+G ++K+ ++ Y N +++ SLP + Y +P +CL G + P +S+ I F +F++ S+ E G ++ WW ++ +I +A F I+K + T F +TAK T+D EFG V +T V ++ +LN G L ++ +++ P + L R++ P V + S+ LAS+ LL Sbjct: 741 RHCPLWYGYGGGRLKWLQRLSYINTIVYPFTSLPLIAYCCLPAICLLTGKFIIPTLSNAATIWFLGLFISIIVTSVLELRWSGIGIEDWWRNEQFWVIGGVSAHLFAVFQGILKMIAGLDTNFTVTAK-ATDDT---------EFGELYVFKWTTVLIPPTSILVLNLVGVVAGFSDALNSGYESWGPLFGKVFFAMWVIMHLYPFLKGLMGRQNR--TPTIVVLWSVLLASVFSLL 965
BLAST of EY711311 vs. ExPASy Swiss-Prot
Match: CESA4_ORYSI (Cellulose synthase A catalytic subunit 4 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA4 PE=2 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 4.794e-11 Identity = 60/237 (25.32%), Postives = 105/237 (44.30%), Query Frame = 1 Query: 10 RYCPFIYGHG--KIKFGAQMGYCNYLLWAPLSLPTLFYVIVPPLCLRHGISLFPKVSSLWFIPFAYVFVAQNAYSICEALSCGHKLKSWWNLQRMLIIRRTTAFFFGFVDCIVKQMGLSQTAFAITAKMVTEDVMERYEQEMMEFGSSSVM-FTIV----ATLAMLNXXXXXXXXXXXXXXXXXXXGNLMCQIILCGLMVLVNVPIYEALFIRKDXGCMPFSVXVKSMFLASLACLL 699 R+CP YG+G ++K+ ++ Y N +++ SLP + Y +P +CL G + P +S+ I F +F++ S+ E G ++ WW ++ +I +A F I+K + T F +TAK T+D EFG V +T V ++ +LN G L ++ +++ P + L R++ P V + S+ LAS+ LL Sbjct: 741 RHCPLWYGYGGGRLKWLQRLSYINTIVYPFTSLPLIAYCCLPAICLLTGKFIIPTLSNAATIWFLGLFISIIVTSVLELRWSGIGIEDWWRNEQFWVIGGVSAHLFAVFQGILKMIAGLDTNFTVTAK-ATDDT---------EFGELYVFKWTTVLIPPTSILVLNLVGVVAGFSDALNSGYESWGPLFGKVFFAMWVIMHLYPFLKGLMGRQNR--TPTIVVLWSVLLASVFSLL 965 The following BLAST results are available for this feature:
BLAST of EY711311 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 27
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY711311 ID=EY711311; Name=EY711311; organism=Citrus sinensis; type=EST; length=804bpback to top |