EY711311

Overview
NameEY711311
Unique NameEY711311
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length804
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY711311 vs. ExPASy Swiss-Prot
Match: CESA1_ORYSJ (Probable cellulose synthase A catalytic subunit 1 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA1 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.810e-11
Identity = 56/231 (24.24%), Postives = 104/231 (45.02%), Query Frame = 1
Query:   10 RYCPFIYGH-GKIKFGAQMGYCNYLLWAPLSLPTLFYVIVPPLCLRHGISLFPKVSSLWFIPFAYVFVAQNAYSICEALSCGHKLKSWWNLQRMLIIRRTTAFFFGFVDCIVKQMGLSQTAFAITAKMVTEDVMERYEQEMMEFGSSSVMFTIVATLAMLNXXXXXXXXXXXXXXXXXXXGNLMCQIILCGLMVLVNVPIYEALFIRKDXGCMPFSVXVKSMFLASLACLL 699
            R+CP  YG+ G++K   ++ Y N +++   S+P + Y ++P +CL     + P++S+   + F  +F +  A  I E    G  ++ WW  ++  +I  T+A  F     ++K +    T F +T+K   ED       E+  F  +S++     T+ ++N                   G L  ++     ++L   P  + L  R++    P  V V S+ LAS+  LL
Sbjct:  828 RHCPIWYGYNGRLKLLERLAYINTIVYPITSIPLIAYCVLPAICLLTNKFIIPEISNYAGMFFILLFASIFATGILELRWSGVGIEDWWRNEQFWVIGGTSAHLFAVFQGLLKVLAGIDTNFTVTSKASDED---GDFAELYVFKWTSLLIP-PTTVLVINLVGMVAGISYAINSGYQSWGPLFGKLFFSIWVILHLYPFLKGLMGRQNR--TPTIVIVWSILLASIFSLL 1052          
BLAST of EY711311 vs. ExPASy Swiss-Prot
Match: CESA1_ORYSI (Probable cellulose synthase A catalytic subunit 1 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA1 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.810e-11
Identity = 56/231 (24.24%), Postives = 104/231 (45.02%), Query Frame = 1
Query:   10 RYCPFIYGH-GKIKFGAQMGYCNYLLWAPLSLPTLFYVIVPPLCLRHGISLFPKVSSLWFIPFAYVFVAQNAYSICEALSCGHKLKSWWNLQRMLIIRRTTAFFFGFVDCIVKQMGLSQTAFAITAKMVTEDVMERYEQEMMEFGSSSVMFTIVATLAMLNXXXXXXXXXXXXXXXXXXXGNLMCQIILCGLMVLVNVPIYEALFIRKDXGCMPFSVXVKSMFLASLACLL 699
            R+CP  YG+ G++K   ++ Y N +++   S+P + Y ++P +CL     + P++S+   + F  +F +  A  I E    G  ++ WW  ++  +I  T+A  F     ++K +    T F +T+K   ED       E+  F  +S++     T+ ++N                   G L  ++     ++L   P  + L  R++    P  V V S+ LAS+  LL
Sbjct:  828 RHCPIWYGYNGRLKLLERLAYINTIVYPITSIPLIAYCVLPAICLLTNKFIIPEISNYAGMFFILLFASIFATGILELRWSGVGIEDWWRNEQFWVIGGTSAHLFAVFQGLLKVLAGIDTNFTVTSKASDED---GDFAELYVFKWTSLLIP-PTTVLVINLVGMVAGISYAINSGYQSWGPLFGKLFFSIWVILHLYPFLKGLMGRQNR--TPTIVIVWSILLASIFSLL 1052          
BLAST of EY711311 vs. ExPASy Swiss-Prot
Match: CESA9_ORYSJ (Cellulose synthase A catalytic subunit 9 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA9 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.670e-11
Identity = 55/232 (23.71%), Postives = 101/232 (43.53%), Query Frame = 1
Query:   10 RYCPFIYGH--GKIKFGAQMGYCNYLLWAPLSLPTLFYVIVPPLCLRHGISLFPKVSSLWFIPFAYVFVAQNAYSICEALSCGHKLKSWWNLQRMLIIRRTTAFFFGFVDCIVKQMGLSQTAFAITAKMVTEDVMERYEQEMMEFGSSSVMFTIVATLAMLNXXXXXXXXXXXXXXXXXXXGNLMCQIILCGLMVLVNVPIYEALFIRKDXGCMPFSVXVKSMFLASLACLL 699
            R+ P +YG+  G +K+  +  Y N  ++   SLP L Y  +P +CL  G  + P +S+   + F  +F++  A  I E    G  ++ WW  ++  +I   +A  F  V  ++K +    T F +T+K   ++  E  E    ++   + +     TL +LN                   G L  ++     +++   P  + L  R++    P  V + S+ LAS+  LL
Sbjct:  806 RHSPLLYGYKNGNLKWLERFSYINTTIYPFTSLPLLAYCTLPAVCLLTGKFIMPPISTFASLFFIALFISIFATGILEMRWSGVSIEEWWRNEQFWVIGGVSAHLFAVVQGLLKVLAGIDTNFTVTSKATGDEDDEFAELYAFKW---TTLLIPPTTLLILNIIGVVAGVSDAINNGSEAWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNR--TPTIVVIWSVLLASIFSLL 1032          
BLAST of EY711311 vs. ExPASy Swiss-Prot
Match: CESA9_ORYSI (Cellulose synthase A catalytic subunit 9 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA9 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.670e-11
Identity = 55/232 (23.71%), Postives = 101/232 (43.53%), Query Frame = 1
Query:   10 RYCPFIYGH--GKIKFGAQMGYCNYLLWAPLSLPTLFYVIVPPLCLRHGISLFPKVSSLWFIPFAYVFVAQNAYSICEALSCGHKLKSWWNLQRMLIIRRTTAFFFGFVDCIVKQMGLSQTAFAITAKMVTEDVMERYEQEMMEFGSSSVMFTIVATLAMLNXXXXXXXXXXXXXXXXXXXGNLMCQIILCGLMVLVNVPIYEALFIRKDXGCMPFSVXVKSMFLASLACLL 699
            R+ P +YG+  G +K+  +  Y N  ++   SLP L Y  +P +CL  G  + P +S+   + F  +F++  A  I E    G  ++ WW  ++  +I   +A  F  V  ++K +    T F +T+K   ++  E  E    ++   + +     TL +LN                   G L  ++     +++   P  + L  R++    P  V + S+ LAS+  LL
Sbjct:  806 RHSPLLYGYKNGNLKWLERFSYINTTIYPFTSLPLLAYCTLPAVCLLTGKFIMPPISTFASLFFIALFISIFATGILEMRWSGVSIEEWWRNEQFWVIGGVSAHLFAVVQGLLKVLAGIDTNFTVTSKATGDEDDEFAELYAFKW---TTLLIPPTTLLILNIIGVVAGVSDAINNGSEAWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNR--TPTIVVIWSVLLASIFSLL 1032          
BLAST of EY711311 vs. ExPASy Swiss-Prot
Match: CESA7_ORYSJ (Cellulose synthase A catalytic subunit 7 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA7 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.670e-11
Identity = 52/231 (22.51%), Postives = 103/231 (44.59%), Query Frame = 1
Query:   10 RYCPFIYGHG-KIKFGAQMGYCNYLLWAPLSLPTLFYVIVPPLCLRHGISLFPKVSSLWFIPFAYVFVAQNAYSICEALSCGHKLKSWWNLQRMLIIRRTTAFFFGFVDCIVKQMGLSQTAFAITAKMVTEDVMERYEQEMMEFGSSSVMFTIVATLAMLNXXXXXXXXXXXXXXXXXXXGNLMCQIILCGLMVLVNVPIYEALFIRKDXGCMPFSVXVKSMFLASLACLL 699
            R+CP  Y +G ++K+  +  Y N +++   S+P L Y  +P +CL  G  + P +++L  I F  +F++  A  + E    G  ++ WW  ++  +I   +A  F     ++K +G   T F +T+K   ++     E  + ++   + +     TL ++N                   G L  ++     ++L   P  + L  R++    P  V + S+ LAS+  L+
Sbjct:  815 RHCPLWYAYGGRLKWLERFAYTNTIVYPFTSIPLLAYCTIPAVCLLTGKFIIPTLNNLASIWFIALFLSIIATGVLELRWSGVSIEDWWRNEQFWVIGGVSAHLFAVFQGLLKVLGGVDTNFTVTSKAAADETDAFGELYLFKW---TTLLVPPTTLIIINMVGIVAGVSDAVNNGYGSWGPLFGKLFFSFWVILHLYPFLKGLMGRQNR--TPTIVVLWSILLASIFSLV 1040          
BLAST of EY711311 vs. ExPASy Swiss-Prot
Match: CESA4_ORYSJ (Cellulose synthase A catalytic subunit 4 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA4 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.794e-11
Identity = 60/237 (25.32%), Postives = 105/237 (44.30%), Query Frame = 1
Query:   10 RYCPFIYGHG--KIKFGAQMGYCNYLLWAPLSLPTLFYVIVPPLCLRHGISLFPKVSSLWFIPFAYVFVAQNAYSICEALSCGHKLKSWWNLQRMLIIRRTTAFFFGFVDCIVKQMGLSQTAFAITAKMVTEDVMERYEQEMMEFGSSSVM-FTIV----ATLAMLNXXXXXXXXXXXXXXXXXXXGNLMCQIILCGLMVLVNVPIYEALFIRKDXGCMPFSVXVKSMFLASLACLL 699
            R+CP  YG+G  ++K+  ++ Y N +++   SLP + Y  +P +CL  G  + P +S+   I F  +F++    S+ E    G  ++ WW  ++  +I   +A  F     I+K +    T F +TAK  T+D          EFG   V  +T V     ++ +LN                   G L  ++     +++   P  + L  R++    P  V + S+ LAS+  LL
Sbjct:  741 RHCPLWYGYGGGRLKWLQRLSYINTIVYPFTSLPLIAYCCLPAICLLTGKFIIPTLSNAATIWFLGLFISIIVTSVLELRWSGIGIEDWWRNEQFWVIGGVSAHLFAVFQGILKMIAGLDTNFTVTAK-ATDDT---------EFGELYVFKWTTVLIPPTSILVLNLVGVVAGFSDALNSGYESWGPLFGKVFFAMWVIMHLYPFLKGLMGRQNR--TPTIVVLWSVLLASVFSLL 965          
BLAST of EY711311 vs. ExPASy Swiss-Prot
Match: CESA4_ORYSI (Cellulose synthase A catalytic subunit 4 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA4 PE=2 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 4.794e-11
Identity = 60/237 (25.32%), Postives = 105/237 (44.30%), Query Frame = 1
Query:   10 RYCPFIYGHG--KIKFGAQMGYCNYLLWAPLSLPTLFYVIVPPLCLRHGISLFPKVSSLWFIPFAYVFVAQNAYSICEALSCGHKLKSWWNLQRMLIIRRTTAFFFGFVDCIVKQMGLSQTAFAITAKMVTEDVMERYEQEMMEFGSSSVM-FTIV----ATLAMLNXXXXXXXXXXXXXXXXXXXGNLMCQIILCGLMVLVNVPIYEALFIRKDXGCMPFSVXVKSMFLASLACLL 699
            R+CP  YG+G  ++K+  ++ Y N +++   SLP + Y  +P +CL  G  + P +S+   I F  +F++    S+ E    G  ++ WW  ++  +I   +A  F     I+K +    T F +TAK  T+D          EFG   V  +T V     ++ +LN                   G L  ++     +++   P  + L  R++    P  V + S+ LAS+  LL
Sbjct:  741 RHCPLWYGYGGGRLKWLQRLSYINTIVYPFTSLPLIAYCCLPAICLLTGKFIIPTLSNAATIWFLGLFISIIVTSVLELRWSGIGIEDWWRNEQFWVIGGVSAHLFAVFQGILKMIAGLDTNFTVTAK-ATDDT---------EFGELYVFKWTTVLIPPTSILVLNLVGVVAGFSDALNSGYESWGPLFGKVFFAMWVIMHLYPFLKGLMGRQNR--TPTIVVLWSVLLASVFSLL 965          
The following BLAST results are available for this feature:
BLAST of EY711311 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 27
Match NameE-valueIdentityDescription
CESA1_ORYSJ2.810e-1124.24Probable cellulose synthase A catalytic subunit 1 ... [more]
CESA1_ORYSI2.810e-1124.24Probable cellulose synthase A catalytic subunit 1 ... [more]
CESA9_ORYSJ3.670e-1123.71Cellulose synthase A catalytic subunit 9 [UDP-form... [more]
CESA9_ORYSI3.670e-1123.71Cellulose synthase A catalytic subunit 9 [UDP-form... [more]
CESA7_ORYSJ3.670e-1122.51Cellulose synthase A catalytic subunit 7 [UDP-form... [more]
CESA4_ORYSJ4.794e-1125.32Cellulose synthase A catalytic subunit 4 [UDP-form... [more]
CESA4_ORYSI4.794e-1125.32Cellulose synthase A catalytic subunit 4 [UDP-form... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-006-C06-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY711311 ID=EY711311; Name=EY711311; organism=Citrus sinensis; type=EST; length=804bp
CCACGCGTCCGGTATTGCCCCTTCATTTATGGTCATGGCAAGATCAAATT
TGGAGCCCAAATGGGTTACTGCAATTATCTTTTATGGGCTCCCCTCTCCT
TGCCTACTCTGTTTTATGTTATTGTTCCTCCTCTTTGCTTGCGCCATGGC
ATTTCCTTATTTCCAAAGGTGTCAAGCCTATGGTTCATACCATTTGCATA
TGTTTTCGTAGCCCAGAATGCGTACAGCATATGTGAGGCGCTGAGTTGTG
GCCACAAACTCAAATCCTGGTGGAATTTGCAGAGAATGCTGATCATCCGA
AGGACTACTGCATTCTTTTTCGGATTCGTCGACTGTATTGTCAAGCAAAT
GGGGCTATCCCAAACAGCATTTGCCATCACTGCCAAGATGGTGACAGAGG
ATGTTATGGAGAGGTATGAGCAAGAAATGATGGAGTTTGGAAGCTCGTCC
GTCATGTTCACAATTGTTGCAACACTTGCAATGCTCAATCTTTTCAGCTT
AATTGGAGGATTCATCGACATCATTTTCCTGGATTTCGGAGCTCTAGGAA
ATCTGATGTGTCAGATTATTCTTTGCGGATTAATGGTGTTGGTCAATGTT
CCCATATATGAAGCTCTCTTCATCCGCAAGGACAANGGCTGCATGCCATT
TTCTGTCATNGTCAAGTCTATGTTTTTGGCTTCATTGGCATGCCTGCTGC
CTTATGTATAANTCATGAGAATAACGTACAATCTTTCACGCCGNTACAGT
TTTTACTTGNAAGTNNATAAACATACTGGTTGCAGAAAAAAAAAAAAAAA
AAAA
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