EY711310
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY711310 vs. ExPASy Swiss-Prot
Match: RL3_SYNP6 (50S ribosomal protein L3 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=rplC PE=3 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 1.136e-35 Identity = 91/198 (45.96%), Postives = 119/198 (60.10%), Query Frame = 1 Query: 283 IGVMGTKLGMMSYFEXXXXXXXXXXXXFREGNI-VTQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRXGAMTHGSKSHRQFGSIGAEHS-GPCIPGEEDAXKNGRXNXKIRKAQM*KL**P-FLCNDKRAVPGKP 867 IG++GTKLGM F+ + G +TQ+KT ATDGY+A+QIG+ VR+K+L+KPELGHL K+G P+RHL E+R+ S DG E GQ L + F G VDV G TIG+GF G KRH F G M+HGSK+HR GS GA + G PG+ A ++G IR + ++ L K +VPGKP Sbjct: 3 IGILGTKLGMTQIFDESGKAVPVTV--IQAGPCPITQIKTVATDGYNAIQIGFLEVREKQLSKPELGHLSKAGAPPLRHLLEYRVPSTDGLELGQALTADR-FEAGQKVDVQGHTIGRGFTGYQKRHGFARGPMSHGSKNHRLPGSTGAGTTPGRVYPGKRMAGRSGNDKTTIRGLTVVRVDADRNLLLVKGSVPGKP 197
BLAST of EY711310 vs. ExPASy Swiss-Prot
Match: RL3_SYNE7 (50S ribosomal protein L3 OS=Synechococcus elongatus (strain PCC 7942) GN=rplC PE=3 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 1.136e-35 Identity = 91/198 (45.96%), Postives = 119/198 (60.10%), Query Frame = 1 Query: 283 IGVMGTKLGMMSYFEXXXXXXXXXXXXFREGNI-VTQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRXGAMTHGSKSHRQFGSIGAEHS-GPCIPGEEDAXKNGRXNXKIRKAQM*KL**P-FLCNDKRAVPGKP 867 IG++GTKLGM F+ + G +TQ+KT ATDGY+A+QIG+ VR+K+L+KPELGHL K+G P+RHL E+R+ S DG E GQ L + F G VDV G TIG+GF G KRH F G M+HGSK+HR GS GA + G PG+ A ++G IR + ++ L K +VPGKP Sbjct: 3 IGILGTKLGMTQIFDESGKAVPVTV--IQAGPCPITQIKTVATDGYNAIQIGFLEVREKQLSKPELGHLSKAGAPPLRHLLEYRVPSTDGLELGQALTADR-FEAGQKVDVQGHTIGRGFTGYQKRHGFARGPMSHGSKNHRLPGSTGAGTTPGRVYPGKRMAGRSGNDKTTIRGLTVVRVDADRNLLLVKGSVPGKP 197
BLAST of EY711310 vs. ExPASy Swiss-Prot
Match: RL3_CYAP8 (50S ribosomal protein L3 OS=Cyanothece sp. (strain PCC 8801) GN=rplC PE=3 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 1.136e-35 Identity = 88/200 (44.00%), Postives = 117/200 (58.50%), Query Frame = 1 Query: 283 IGVMGTKLGMMSYFEXXXXXXXXXXXXFREGNIVTQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRXGAMTHGSKSHRQFGSIGAEHS-GPCIPGEEDAXKNGRXNXKIRKAQM*KL**P-FLCNDKRAVPGKPENL 876 +G++GTKLGM F+ VTQVKT TDGY A+Q+GY V++K LTK E+GHL+K P+RHL+E+RL ++ G + +IFN GDLVDVSG ++G+GF G KRHNF+ G MTHGSK+HR GS GA + G PG+ A + G IR + ++ L K A+PGKP L Sbjct: 3 VGILGTKLGMTQIFDQETGMAIPVTVVQAGPCTVTQVKTPDTDGYTAIQVGYHEVKEKALTKAEIGHLKKIDAPPLRHLKEYRLDDSSQYQLGDAIK-ADIFNPGDLVDVSGKSMGRGFAGYQKRHNFKRGNMTHGSKNHRLPGSTGAGTTPGRVYPGKRMAGQYGATQVTIRHLTVVRVDSDRNLILVKGAIPGKPGTL 201
BLAST of EY711310 vs. ExPASy Swiss-Prot
Match: RK3_CYAPA (50S ribosomal protein L3, cyanelle OS=Cyanophora paradoxa GN=rpl3 PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 2.798e-34 Identity = 88/201 (43.78%), Postives = 120/201 (59.70%), Query Frame = 1 Query: 283 IGVMGTKLGMMSYFEXXXXXXXXXXXXFREGNI-VTQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRXGAMTHGSKSHRQFGSIGAEHS-GPCIPGEEDAXKNGRXNXKIRKAQM*KL**P-FLCNDKRAVPGKPENL 876 IG++GTKLGM F+ + G +TQ+KT ATDGY+A+Q+GYR ++K LTK +LGHLQK+ +R LQEF ++S D E +K E+FN+ D+V++ G +IG+GF G KRHNF G M+HGSK+HR GSIGA + G PG A + G IR ++ K+ L K +VPGKP L Sbjct: 3 IGILGTKLGMTQIFDEAGNAIPVTI--IQAGPCPITQIKTTATDGYNAIQVGYRETKEKNLTKAQLGHLQKTNNSALRVLQEFSIESSDSIEV-EKPITVELFNDNDIVNIQGYSIGRGFSGYQKRHNFARGPMSHGSKNHRLPGSIGAGSTPGRVYPGTRMAGRKGDSKITIRGLKIVKVDSERSLLIVKGSVPGKPGGL 200
BLAST of EY711310 vs. ExPASy Swiss-Prot
Match: RL3_CYAP4 (50S ribosomal protein L3 OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=rplC PE=3 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 4.773e-34 Identity = 87/197 (44.16%), Postives = 116/197 (58.88%), Query Frame = 1 Query: 283 IGVMGTKLGMMSYFEXXXXXXXXXXXXFREGNIVTQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRXGAMTHGSKSHRQFGSIGAEHS-GPCIPGEEDAXKNGRXNXKIRKAQM*KL**P-FLCNDKRAVPGKP 867 +G++GTKLGM F+ I TQ+KT+ TDGY A+Q+ + VR K L+K ELGHL KS PMRHL E+R +D F+ GQ L ++F+ G +VDV+GT+IG+GF G KRHNF+ G M HGSK+HR GS GA + G PG+ A + G IR+ + ++ L K AVPGKP Sbjct: 3 VGILGTKLGMTQIFDQERRAIPVTVVQAGPCPI-TQIKTKQTDGYAAIQVAFGEVRAKSLSKAELGHLAKSNTAPMRHLHEYRTGEVDQFQVGQVLK-ADLFSAGQVVDVTGTSIGRGFAGYQKRHNFKRGPMAHGSKNHRLPGSTGAGTTPGRVYPGKRMAGQLGSARTTIRQLTIVRVDPERNLVLIKGAVPGKP 197
BLAST of EY711310 vs. ExPASy Swiss-Prot
Match: RK3_ODOSI (50S ribosomal protein L3, chloroplastic OS=Odontella sinensis GN=rpl3 PE=3 SV=2) HSP 1 Score: 144.821 bits (364), Expect = 6.234e-34 Identity = 84/204 (41.18%), Postives = 123/204 (60.29%), Query Frame = 1 Query: 283 IGVMGTKLGMMSYFEXXXXXXXXXXXXFREGNIVTQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRXGAMTHGSKSHRQFGSIG-AEHSGPCIPGEEDAXKNGRXNXKIRKAQM*KL-**PFLCNDKRAVPGKPENLCV*H 888 +G++G K+GM F+ ++TQVKT+ DGY+A+QIGY V +K LT+PELGHLQKS + P+++L+EFR+ + + F+ GQ + E + + G +DV+G + GKGF G KRHNF G MTHGSK+HR GSIG G +PG++ A + G K +K ++ ++ + K +VPGKP NL H Sbjct: 3 LGLLGNKIGMTQIFDESGNIIPVTILKVGPC-VITQVKTDLNDGYNAIQIGYGTVSNKSLTQPELGHLQKSNIQPLKYLKEFRVNNPEEFKVGQVVNVESL-STGQFIDVTGKSSGKGFSGLQKRHNFTRGPMTHGSKNHRAPGSIGMGTTPGRVLPGKKMAGQLGNKVTKTKKLKIIQVNGNENILVVKGSVPGKPGNLVTIH 204
BLAST of EY711310 vs. ExPASy Swiss-Prot
Match: RK3_PORYE (50S ribosomal protein L3, chloroplastic OS=Porphyra yezoensis GN=rpl3 PE=3 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 2.369e-33 Identity = 81/200 (40.50%), Postives = 122/200 (61.00%), Query Frame = 1 Query: 283 IGVMGTKLGMMSYFEXXXXXXXXXXXXFREGNIVTQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRXGAMTHGSKSHRQFGSIGAEHS-GPCIPGEEDAXKNGRXNXKIRKAQM*KL**PFLCND----KRAVPGKP 867 +G++GTK+GM +F+ ++TQ+K +TDGY+A+Q+GY++V ++KL KP LGHL+KS P+++L+E+ ++S D FE Q L+ ++F G ++VS ++GKGF G KRH+F G M+HGSK+HRQ GSIGA + G PG+ A + G I+ Q+ + ND K AVPGKP Sbjct: 3 VGILGTKVGMTQFFDEAGLSIPVTVIQVGPC-VITQIKAVSTDGYNAIQVGYKQVAEQKLNKPLLGHLKKSQAPPLKYLREYEMKSTDDFEVSQILS-TDLFQVGQKINVSSRSVGKGFSGYQKRHHFSRGPMSHGSKNHRQPGSIGAGTTPGRVYPGKNMAGQLGNKKVTIKNLQIVSI---NSENDLLIVKGAVPGKP 197
BLAST of EY711310 vs. ExPASy Swiss-Prot
Match: RK3_PHATR (50S ribosomal protein L3, chloroplastic OS=Phaeodactylum tricornutum GN=rpl3 PE=3 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 2.369e-33 Identity = 83/200 (41.50%), Postives = 119/200 (59.50%), Query Frame = 1 Query: 283 IGVMGTKLGMMSYFEXXXXXXXXXXXXFREGNIVTQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRXGAMTHGSKSHRQFGSIG-AEHSGPCIPGEEDAXKNGRXNXKIRKAQM*KL-**PFLCNDKRAVPGKPENL 876 +G++G K+GM F+ ++TQVK ++ DGYD++QIGY V K LT+PELGHLQKS + P+++L+EFR+ F+ GQ L + F G LV++ G +IGKGF G KRHNF G MTHGSK+HR GSIG G +PG++ + + G I+K ++ ++ + K +VPGKP NL Sbjct: 3 VGLLGNKIGMTQIFDESGNIIPVTILKVGPC-VITQVKNQSKDGYDSIQIGYGNVLSKALTQPELGHLQKSNIQPLKYLKEFRINQETEFQIGQVLNVDS-FTPGQLVNIQGKSIGKGFSGLQKRHNFTRGPMTHGSKNHRAPGSIGMGTTPGRVLPGKKMSGQLGNKITTIKKLKIIQINSEENILVIKGSVPGKPGNL 200
BLAST of EY711310 vs. ExPASy Swiss-Prot
Match: RL3_GLOVI (50S ribosomal protein L3 OS=Gloeobacter violaceus GN=rplC PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 3.094e-33 Identity = 81/175 (46.29%), Postives = 107/175 (61.14%), Query Frame = 1 Query: 283 IGVMGTKLGMMSYFEXXXXXXXXXXXXFREGNIVTQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGL-IPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRXGAMTHGSKSHRQFGSIGAEHS-GPCIPGEEDAXKNGRXNXKIRK 801 +G++G KLGM F+ VTQVK+EATDGY AVQ+G+ R+K LT+PE+GH +K+GL P+RHL+EFRL + GQ++ + +F G LVDV GT+IGKGF GG KRH+F G M HGSK+HR GSIGA + G PG+ + G +RK Sbjct: 3 LGILGRKLGMTQIFDEEGRAIPVTVVEAGPCP-VTQVKSEATDGYTAVQLGFGTAREKVLTRPEVGHCKKAGLEAPVRHLREFRLPDSSQYTPGQQITVD-LFAAGQLVDVVGTSIGKGFAGGQKRHHFGRGPMAHGSKNHRAPGSIGAGTTPGRVFPGKRMPGRMGNERVTVRK 175
BLAST of EY711310 vs. ExPASy Swiss-Prot
Match: RK3_GUITH (50S ribosomal protein L3, chloroplastic OS=Guillardia theta GN=rpl3 PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 3.241e-33 Identity = 70/147 (47.62%), Postives = 95/147 (64.63%), Query Frame = 1 Query: 283 IGVMGTKLGMMSYFEXXXXXXXXXXXXFREGNIVTQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRXGAMTHGSKSHRQFGSIG 723 IG++GTKLGM F+ VT +K++ D Y+A+QIGY++V KKLTKP+LGHLQ + L P++HL+E+++ + F Q+L IF G +V VSG +IGKGF G +KRHNF G MTHGSK+HR+ GSIG Sbjct: 3 IGLLGTKLGMTQIFDDNGSAIPVTILKVGPC-YVTNLKSDTKDNYNAIQIGYQQVDAKKLTKPQLGHLQVNNLPPLKHLKEYKVDATHTFTIAQQLDV-SIFELGQIVSVSGVSIGKGFAGTVKRHNFTRGPMTHGSKNHREPGSIG 147 HSP 2 Score: 29.6462 bits (65), Expect = 3.241e-33 Identity = 14/42 (33.33%), Postives = 27/42 (64.29%), Query Frame = 2 Query: 728 NTPXRVYQGKKMPXRMGGTTXRSEKLRCKNCN-DXSCVMIKG 850 +TP +V++GKKM R+GG ++ L + + D + +++KG Sbjct: 150 STPAKVHKGKKMAGRLGGHQVTTKNLTVVHLDKDNNVLVLKG 191 The following BLAST results are available for this feature:
BLAST of EY711310 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY711310 ID=EY711310; Name=EY711310; organism=Citrus sinensis; type=EST; length=894bpback to top |