EY711310
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY711310 vs. ExPASy Swiss-Prot
Match: RL3_SYNJB (50S ribosomal protein L3 OS=Synechococcus sp. GN=rplC PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 2.896e-31 Identity = 76/178 (42.70%), Postives = 109/178 (61.24%), Query Frame = 1 Query: 283 IGVMGTKLGMMSYFEXXXXXXXXXXXXFREGNIVTQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPM-RHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRXGAMTHGSKSHRQFGSIGAEHS-GPCIPGEEDAXKNGRXNXKIRKAQM 810 +G++G K+GM F VTQ+KT+ATDGY+A+Q+GY +K LT+ + GHL K+G+ + RHL+EFR+ + ++ GQK+ E +F+ G LVDV+GT+IG+GF G KRH+F G M+HGSK+HR+ GSIGA + G PG A + G RK Q+ Sbjct: 3 LGILGRKVGMTQIFSPEGLAIPVTVVQAGPCT-VTQIKTQATDGYNAIQLGYLPTAEKHLTRAQRGHLTKAGVTELLRHLREFRVDQPEAYQLGQKITVE-MFSPGQLVDVAGTSIGRGFAGYQKRHHFGRGPMSHGSKNHRRPGSIGAGTTPGRVFPGMRMAGRLGGGRVTTRKLQL 178
BLAST of EY711310 vs. ExPASy Swiss-Prot
Match: RL3_SYNPX (50S ribosomal protein L3 OS=Synechococcus sp. (strain WH8102) GN=rplC PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 4.940e-31 Identity = 84/197 (42.64%), Postives = 109/197 (55.33%), Query Frame = 1 Query: 283 IGVMGTKLGMMSYFEXXXXXXXXXXXXFREGNIVTQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRXGAMTHGSKSHRQFGSIG-AEHSGPCIPGEEDAXKNGRXNXKIRKAQM*KL**P-FLCNDKRAVPGKP 867 IG++G KLGM +F+ I TQ+K+ TDGY AVQIG+ R+K + KP GHL K+G +RHL+E+R+ +DGFE G + + F G VDVSG TIG+GF G KRH F G MTHGSK+HR+ GSIG G PG+ A + G R + K+ L K +VPGKP Sbjct: 3 IGILGKKLGMSQFFDEQGRAVPVTLIEAGPCRI-TQLKSSDTDGYAAVQIGFGDTREKLINKPAKGHLNKTGETLLRHLREYRVDGLDGFELGGSITVGD-FEAGQKVDVSGDTIGRGFSGYQKRHGFSRGPMTHGSKNHREPGSIGPGTTPGRIYPGKRMAGRYGGKKITTRGLTILKVDSERNLLVVKGSVPGKP 197
BLAST of EY711310 vs. ExPASy Swiss-Prot
Match: RL3_SYNSC (50S ribosomal protein L3 OS=Synechococcus sp. (strain CC9605) GN=rplC PE=3 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 6.452e-31 Identity = 83/197 (42.13%), Postives = 110/197 (55.84%), Query Frame = 1 Query: 283 IGVMGTKLGMMSYFEXXXXXXXXXXXXFREGNIVTQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRXGAMTHGSKSHRQFGSIGAEHS-GPCIPGEEDAXKNGRXNXKIRKAQM*KL**PF-LCNDKRAVPGKP 867 IG++G KLGM +F+ I TQ+K + TDGY AVQIG+ R+K + KP GHL KSG +RHL+E+R+ S++G E G + + F G VDVSG T+G+GF G KRH F G MTHGSK+HR+ GS GA + G PG+ A + G R + K+ L K +VPGKP Sbjct: 3 IGILGKKLGMSQFFDEQGRAVPVTLIEAGPCRI-TQLKNDDTDGYSAVQIGFGETREKLINKPAQGHLNKSGEGLLRHLREYRVDSVEGLELGGAITVGD-FEAGQKVDVSGDTVGRGFAGYQKRHGFSRGPMTHGSKNHREPGSTGAGTTPGRIYPGKRMAGRYGGKKITTRGLTILKVDSEHNLLVVKGSVPGKP 197
BLAST of EY711310 vs. ExPASy Swiss-Prot
Match: RL3_SYNR3 (50S ribosomal protein L3 OS=Synechococcus sp. (strain RCC307) GN=rplC PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 8.426e-31 Identity = 83/197 (42.13%), Postives = 111/197 (56.35%), Query Frame = 1 Query: 283 IGVMGTKLGMMSYFEXXXXXXXXXXXXFREGNIVTQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRXGAMTHGSKSHRQFGSIGAEHS-GPCIPGEEDAXKNGRXNXKIRKAQM*KL**P-FLCNDKRAVPGKP 867 IG++G KLGM +F+ I TQVKT DGY AVQ+G+ VR+K + +P GHL+KSG +RHL+E+R+ S DG E G + + F G VDVSG T+G+GF G KRH F G MTHGSK+HR+ GS GA + G PG+ A + G ++ + K+ L K +VPGKP Sbjct: 3 IGILGKKLGMSQFFDDEGRAVPVTVIEAGPCRI-TQVKTPTNDGYSAVQVGFGDVREKLVNQPAKGHLKKSGEDLLRHLKEYRVDSTDGVELGSSVTV-DAFEPGQKVDVSGDTMGRGFSGYQKRHGFSRGPMTHGSKNHREPGSTGAGTTPGRIYPGKRMAGRYGGTKTTVKGLVVLKVDSERNLLVVKGSVPGKP 197
BLAST of EY711310 vs. ExPASy Swiss-Prot
Match: RL3_SYNS9 (50S ribosomal protein L3 OS=Synechococcus sp. (strain CC9902) GN=rplC PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 1.437e-30 Identity = 83/197 (42.13%), Postives = 110/197 (55.84%), Query Frame = 1 Query: 283 IGVMGTKLGMMSYFEXXXXXXXXXXXXFREGNIVTQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRXGAMTHGSKSHRQFGSIGAEHS-GPCIPGEEDAXKNGRXNXKIRKAQM*KL**P-FLCNDKRAVPGKP 867 IG++G KLGM F+ I TQ+K + TDGY AVQIG+ R+K + KP GHL KSG +RHL+E+R+ ++DG E G + + F G VDVSG T+G+GF G KRH F G MTHGSK+HRQ GSIGA + G PG+ + + G R + ++ L K +VPGKP Sbjct: 3 IGILGKKLGMSQLFDEQGRAVPVTLIEAGPCRI-TQLKNDDTDGYAAVQIGFGETREKLINKPSKGHLTKSGEDLLRHLREYRVDNVDGLELGGSITVSD-FEAGQKVDVSGDTMGRGFAGLQKRHGFSRGPMTHGSKNHRQPGSIGAGTTPGRIYPGKRMSGRYGGKKTTTRGLTILRIDSDRNLLVVKGSVPGKP 197
BLAST of EY711310 vs. ExPASy Swiss-Prot
Match: RK3_RHDSA (50S ribosomal protein L3, chloroplastic OS=Rhodomonas salina GN=rpl3 PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 1.437e-30 Identity = 80/205 (39.02%), Postives = 117/205 (57.07%), Query Frame = 1 Query: 286 GVMGTKLGMMSYFEXXXXXXXXXXXXFREGN-IVTQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRXGAMTHGSKSHRQFGSIG-AEHSGPCIPGEEDAXKNGRXNXKIRKAQM*KL**PFLCND------KRAVPGKPENL 876 G++GTKLGM F+ + G I+TQ+KT+ +D Y A+QIG+ V++ L KP LGHL+KS ++HL+E+R++S++G E QK+ + F G V VSG TIGKGF G ++R++F G MTHGSK+HR+ GSIG G G++ A + G I+ ++ + D K AVPGK N+ Sbjct: 4 GILGTKLGMTQIFDESGLAIPVTV--IKAGPCILTQIKTQESDSYQAIQIGFSEVKESSLNKPLLGHLKKSQAPALKHLKEYRVKSVEGLEVAQKITLDS-FEVGKTVSVSGKTIGKGFAGTVRRYSFTRGPMTHGSKNHREPGSIGQGSTPGKVHKGKKMAGRLGGKQSTIKNLEI-----VHVNTDNNILVVKGAVPGKKGNI 200
BLAST of EY711310 vs. ExPASy Swiss-Prot
Match: RL3_SYNS3 (50S ribosomal protein L3 OS=Synechococcus sp. (strain CC9311) GN=rplC PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 2.452e-30 Identity = 84/200 (42.00%), Postives = 112/200 (56.00%), Query Frame = 1 Query: 283 IGVMGTKLGMMSYFEXXXXXXXXXXXXFREGNIVTQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRXGAMTHGSKSHRQFGSIGAEHS-GPCIPGEEDAXKNGRXNXKIRKAQM*KL**P-FLCNDKRAVPGKPENL 876 IG++G KLGM +F+ I TQ+K+ TDGY AVQIG+ +R+K + KP GHL KSG +RHL E+R+ +DG + G + + F G VDVSG T+G+GF G KRH F G MTHGSK+HRQ GSIGA + G PG+ + + G R + K+ L K +VPGKP +L Sbjct: 3 IGILGKKLGMSQFFDEQGKAVPVTLIEAGPCRI-TQLKSSETDGYQAVQIGFGEIREKLINKPAKGHLAKSGEDLVRHLCEYRVDDLDGIQLGGAVTVGD-FAAGQKVDVSGDTMGRGFAGLQKRHGFSRGPMTHGSKNHRQPGSIGAGTTPGRIYPGKRMSGRYGGKKITTRGLTILKIDSERNLLVVKGSVPGKPGSL 200
BLAST of EY711310 vs. ExPASy Swiss-Prot
Match: RL3_PROM1 (50S ribosomal protein L3 OS=Prochlorococcus marinus (strain NATL1A) GN=rplC PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 2.452e-30 Identity = 82/200 (41.00%), Postives = 115/200 (57.50%), Query Frame = 1 Query: 283 IGVMGTKLGMMSYFEXXXXXXXXXXXXFREGNIVTQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRXGAMTHGSKSHRQFGSIGAEHS-GPCIPGEEDAXKNGRXNXKIRKAQM*KL**PF-LCNDKRAVPGKPENL 876 +G++G KLGM F+ I TQ+K+ TDGY AVQIG++ +R+K + KP GHL KSG +RHL+E+R+++ FE G + ++ F +G VDVSG T+G+GF G KRH F G M+HGSK+HR GSIGA + G PG+ A + G R ++ K+ L K +VPGKP +L Sbjct: 3 LGILGKKLGMSQLFDDQGRAVPVTLIEAGPCRI-TQLKSADTDGYAAVQIGFQLIREKLINKPSKGHLAKSGNDLLRHLREYRVENSSEFELGASITVDD-FEKGQKVDVSGDTMGRGFAGYQKRHGFSRGPMSHGSKNHRLPGSIGAGTTPGRVYPGKRMAGRMGGKKVTTRALEILKIDTNHNLLVVKGSVPGKPGSL 200
BLAST of EY711310 vs. ExPASy Swiss-Prot
Match: RL3_PROMT (50S ribosomal protein L3 OS=Prochlorococcus marinus (strain NATL2A) GN=rplC PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 3.202e-30 Identity = 81/200 (40.50%), Postives = 115/200 (57.50%), Query Frame = 1 Query: 283 IGVMGTKLGMMSYFEXXXXXXXXXXXXFREGNIVTQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRXGAMTHGSKSHRQFGSIGAEHS-GPCIPGEEDAXKNGRXNXKIRKAQM*KL**PF-LCNDKRAVPGKPENL 876 +G++G KLGM F+ I TQ+K+ TDGY AVQIG++ +R+K + KP GHL KSG +RHL+E+R+++ FE G + ++ F +G VD+SG T+G+GF G KRH F G M+HGSK+HR GSIGA + G PG+ A + G R ++ K+ L K +VPGKP +L Sbjct: 3 LGILGKKLGMSQLFDDQGRAVPVTLIEAGPCRI-TQLKSADTDGYAAVQIGFQLIREKLINKPSKGHLAKSGNDLLRHLREYRVENSSEFELGASITVDD-FEKGQKVDISGDTMGRGFAGYQKRHGFSRGPMSHGSKNHRLPGSIGAGTTPGRVYPGKRMAGRMGGKKVTTRALEILKIDTNHNLLVVKGSVPGKPGSL 200
BLAST of EY711310 vs. ExPASy Swiss-Prot
Match: RL3_ALKMQ (50S ribosomal protein L3 OS=Alkaliphilus metalliredigens (strain QYMF) GN=rplC PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 3.202e-30 Identity = 81/205 (39.51%), Postives = 112/205 (54.63%), Query Frame = 1 Query: 286 GVMGTKLGMMSYFEXXXXXXXXXXXXFREGNIVTQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRXGAMTHGSKSHRQFGSIGAE------HSGPCIPGEEDAXKNGRXNXKIRKAQM*KL**PFLCNDKRAVPGKPENLCV 882 G+MG K+GM F E N+VTQ+K++ TDGY++VQ+GY + K KP GH +K+G P R ++EFR+ S +GF AGQ+L ++F GD VDV+G + GKGFQG IKRH G M HGS+ HR+ GS+GA G +PG + N +I + + K L K AVPG + + V Sbjct: 3 GLMGRKVGMTQIFNEDGIVTPVTVIEVAE-NVVTQIKSDETDGYNSVQVGYGEKKIKNTIKPLQGHFEKAGTTPKRTMKEFRVDSTEGFTAGQELK-ADLFQAGDKVDVTGISKGKGFQGVIKRHGQSRGPMAHGSRYHRRPGSMGASAYPGRVFKGKNLPGHMGNVQVTAQNLEIVRVDLEK----NLLLIKGAVPGPKKGVLV 201 The following BLAST results are available for this feature:
BLAST of EY711310 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY711310 ID=EY711310; Name=EY711310; organism=Citrus sinensis; type=EST; length=894bpback to top |