EY711310
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY711310 vs. ExPASy Swiss-Prot
Match: RL3_SALHS (50S ribosomal protein L3 OS=Salmonella heidelberg (strain SL476) GN=rplC PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 2.080e-21 Identity = 69/174 (39.66%), Postives = 93/174 (53.45%), Query Frame = 1 Query: 283 IGVMGTKLGMMSYFEXXXXXXXXXXXXFREGNIVTQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRXGAMTHG-SKSHRQFGSIGAEHS-GPCIPGEEDAXKNGRXNXKIR 798 IG++G K+GM F E N VTQVK A DGY AVQ+ + ++TKPE GH K+G+ R L EFRL + + GQ ++ E+F + VDV+GT+ GKGF G +KR NFR THG S SHR GSIG + G G++ A + G ++ Sbjct: 2 IGLVGKKVGMTRIFTEDGVSIPVTVIEV-EANRVTQVKDLANDGYRAVQVTTGAKKANRVTKPEAGHFAKAGVEAGRGLWEFRLAEGEEYTVGQSISV-ELFADVKKVDVTGTSKGKGFAGTVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQMGNERVTVQ 173
BLAST of EY711310 vs. ExPASy Swiss-Prot
Match: RL3_SALG2 (50S ribosomal protein L3 OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=rplC PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 2.080e-21 Identity = 69/174 (39.66%), Postives = 93/174 (53.45%), Query Frame = 1 Query: 283 IGVMGTKLGMMSYFEXXXXXXXXXXXXFREGNIVTQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRXGAMTHG-SKSHRQFGSIGAEHS-GPCIPGEEDAXKNGRXNXKIR 798 IG++G K+GM F E N VTQVK A DGY AVQ+ + ++TKPE GH K+G+ R L EFRL + + GQ ++ E+F + VDV+GT+ GKGF G +KR NFR THG S SHR GSIG + G G++ A + G ++ Sbjct: 2 IGLVGKKVGMTRIFTEDGVSIPVTVIEV-EANRVTQVKDLANDGYRAVQVTTGAKKANRVTKPEAGHFAKAGVEAGRGLWEFRLAEGEEYTVGQSISV-ELFADVKKVDVTGTSKGKGFAGTVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQMGNERVTVQ 173
BLAST of EY711310 vs. ExPASy Swiss-Prot
Match: RL3_SALEP (50S ribosomal protein L3 OS=Salmonella enteritidis PT4 (strain P125109) GN=rplC PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 2.080e-21 Identity = 69/174 (39.66%), Postives = 93/174 (53.45%), Query Frame = 1 Query: 283 IGVMGTKLGMMSYFEXXXXXXXXXXXXFREGNIVTQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRXGAMTHG-SKSHRQFGSIGAEHS-GPCIPGEEDAXKNGRXNXKIR 798 IG++G K+GM F E N VTQVK A DGY AVQ+ + ++TKPE GH K+G+ R L EFRL + + GQ ++ E+F + VDV+GT+ GKGF G +KR NFR THG S SHR GSIG + G G++ A + G ++ Sbjct: 2 IGLVGKKVGMTRIFTEDGVSIPVTVIEV-EANRVTQVKDLANDGYRAVQVTTGAKKANRVTKPEAGHFAKAGVEAGRGLWEFRLAEGEEYTVGQSISV-ELFADVKKVDVTGTSKGKGFAGTVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQMGNERVTVQ 173
BLAST of EY711310 vs. ExPASy Swiss-Prot
Match: RL3_SALDC (50S ribosomal protein L3 OS=Salmonella dublin (strain CT_02021853) GN=rplC PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 2.080e-21 Identity = 69/174 (39.66%), Postives = 93/174 (53.45%), Query Frame = 1 Query: 283 IGVMGTKLGMMSYFEXXXXXXXXXXXXFREGNIVTQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRXGAMTHG-SKSHRQFGSIGAEHS-GPCIPGEEDAXKNGRXNXKIR 798 IG++G K+GM F E N VTQVK A DGY AVQ+ + ++TKPE GH K+G+ R L EFRL + + GQ ++ E+F + VDV+GT+ GKGF G +KR NFR THG S SHR GSIG + G G++ A + G ++ Sbjct: 2 IGLVGKKVGMTRIFTEDGVSIPVTVIEV-EANRVTQVKDLANDGYRAVQVTTGAKKANRVTKPEAGHFAKAGVEAGRGLWEFRLAEGEEYTVGQSISV-ELFADVKKVDVTGTSKGKGFAGTVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQMGNERVTVQ 173
BLAST of EY711310 vs. ExPASy Swiss-Prot
Match: RL3_SALCH (50S ribosomal protein L3 OS=Salmonella choleraesuis GN=rplC PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 2.080e-21 Identity = 69/174 (39.66%), Postives = 93/174 (53.45%), Query Frame = 1 Query: 283 IGVMGTKLGMMSYFEXXXXXXXXXXXXFREGNIVTQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRXGAMTHG-SKSHRQFGSIGAEHS-GPCIPGEEDAXKNGRXNXKIR 798 IG++G K+GM F E N VTQVK A DGY AVQ+ + ++TKPE GH K+G+ R L EFRL + + GQ ++ E+F + VDV+GT+ GKGF G +KR NFR THG S SHR GSIG + G G++ A + G ++ Sbjct: 2 IGLVGKKVGMTRIFTEDGVSIPVTVIEV-EANRVTQVKDLANDGYRAVQVTTGAKKANRVTKPEAGHFAKAGVEAGRGLWEFRLAEGEEYTVGQSISV-ELFADVKKVDVTGTSKGKGFAGTVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQMGNERVTVQ 173
BLAST of EY711310 vs. ExPASy Swiss-Prot
Match: RL3_SALA4 (50S ribosomal protein L3 OS=Salmonella agona (strain SL483) GN=rplC PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 2.080e-21 Identity = 69/174 (39.66%), Postives = 93/174 (53.45%), Query Frame = 1 Query: 283 IGVMGTKLGMMSYFEXXXXXXXXXXXXFREGNIVTQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRXGAMTHG-SKSHRQFGSIGAEHS-GPCIPGEEDAXKNGRXNXKIR 798 IG++G K+GM F E N VTQVK A DGY AVQ+ + ++TKPE GH K+G+ R L EFRL + + GQ ++ E+F + VDV+GT+ GKGF G +KR NFR THG S SHR GSIG + G G++ A + G ++ Sbjct: 2 IGLVGKKVGMTRIFTEDGVSIPVTVIEV-EANRVTQVKDLANDGYRAVQVTTGAKKANRVTKPEAGHFAKAGVEAGRGLWEFRLAEGEEYTVGQSISV-ELFADVKKVDVTGTSKGKGFAGTVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQMGNERVTVQ 173
BLAST of EY711310 vs. ExPASy Swiss-Prot
Match: RL3_DESVM (50S ribosomal protein L3 OS=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) GN=rplC PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 2.080e-21 Identity = 60/148 (40.54%), Postives = 84/148 (56.76%), Query Frame = 1 Query: 283 IGVMGTKLGMMSYFEXXXXXXXXXXXXFREGNIVTQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRXGAMTHG-SKSHRQFGSIG 723 +G++G K+GM F ++ QV+ TDGYDAVQI + ++K +TKP GH K+G R+L+E RL++ FE GQ+L +F G+ V V+GT+IGKG+QG ++R NF THG K HR GSIG Sbjct: 5 LGILGRKVGMTRIFASDGSAVAVTVIQAGPCPVI-QVRNGETDGYDAVQIAFEEAKEKHVTKPARGHFAKAGKGLFRNLREIRLEAPAEFEVGQELTV-SLFAAGEKVKVTGTSIGKGYQGVMRRWNFAGSKDTHGCEKVHRSGGSIG 150
BLAST of EY711310 vs. ExPASy Swiss-Prot
Match: RL3_ALTMD (50S ribosomal protein L3 OS=Alteromonas macleodii (strain DSM 17117 / Deep ecotype) GN=rplC PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 2.080e-21 Identity = 69/169 (40.83%), Postives = 93/169 (55.03%), Query Frame = 1 Query: 283 IGVMGTKLGMMSYFEXXXXXXXXXXXXFREGNIVTQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDG--FEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRXGAMTHG-SKSHRQFGSIGAEHS-GPCIPGEEDAXKNG 777 IG++G K+GM F N VTQ++TE +DGY A+Q+ + ++ K E GH K+G+ R L EFRL+ +G E G ++ E IFN+ +DV+GT+ GKGFQG IKR NF MTHG S SHR GSIG S G G++ A + G Sbjct: 3 IGLVGRKVGMTRIFTEDGTSIPVTVIEATP-NRVTQLRTEESDGYRALQVTAGTKKANRINKAEAGHFAKAGVEAGRTLVEFRLEENEGADIEVGSEITVE-IFNDTKKIDVTGTSKGKGFQGAIKRWNFSSQRMTHGNSLSHRAPGSIGQNQSPGKVFKGKKMAGQLG 169
BLAST of EY711310 vs. ExPASy Swiss-Prot
Match: RL3_HERAR (50S ribosomal protein L3 OS=Herminiimonas arsenicoxydans GN=rplC PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 2.637e-21 Identity = 65/170 (38.24%), Postives = 89/170 (52.35%), Query Frame = 1 Query: 259 VSMSYEAGIGVMGTKLGMMSYFEXXXXXXXXXXXXFREGNIVTQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFE--AGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRXGAMTHG-SKSHRQFGSIG-AEHSGPCIPGE 756 ++ + + G G++G K+GMM F N VTQ+KT DGY AVQ+ + R ++ K GH K+G+ L+EFR+ + E G +A +F G VDV G TIGKG+ G IKRH+F G THG S+SH GSIG A+ G PG+ Sbjct: 1 MNQNQDKGQGLLGRKVGMMRIFTDDGDSIPVTVLDV-SNNRVTQIKTPDVDGYSAVQVAFGSRRASRVNKASAGHHAKAGVEAGTVLKEFRVAATAASELKVGDVIA-ASLFEVGQKVDVQGVTIGKGYAGTIKRHHFASGRATHGNSRSHNVPGSIGMAQDPGRVFPGK 168 HSP 2 Score: 23.8682 bits (50), Expect = 2.637e-21 Identity = 11/40 (27.50%), Postives = 19/40 (47.50%), Query Frame = 2 Query: 734 PXRVYQGKKMPXRMGGTTXRSEKLRCKNCN-DXSCVMIKG 850 P RV+ GK+M +G + L + D +++KG Sbjct: 161 PGRVFPGKRMTGHLGDVARTMQNLEIARIDADRQLLLVKG 200
BLAST of EY711310 vs. ExPASy Swiss-Prot
Match: RL3_RALSO (50S ribosomal protein L3 OS=Ralstonia solanacearum GN=rplC PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 2.639e-21 Identity = 62/161 (38.51%), Postives = 89/161 (55.28%), Query Frame = 1 Query: 283 IGVMGTKLGMMSYFEXXXXXXXXXXXXFREGNIVTQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFE-EIFNEGDLVDVSGTTIGKGFQGGIKRHNFRXGAMTHG-SKSHRQFGSIG-AEHSGPCIPGE 756 +G++G K+GM F GN VTQ+KT+ TDGY AVQ+ + R ++TKP GHL K+G+ + EFR+ + E + ++F+ +DV GTTIGKG+ G IKR++F G +HG S+SH GSIG A+ G PG+ Sbjct: 3 LGLVGRKVGMTRVFTDDGDSIPVTVLEVG-GNRVTQIKTDETDGYTAVQVTFGTRRASRVTKPLAGHLAKAGVEAGEIIVEFRIDATKAAELKLGDTIDVDLFSVDQKIDVQGTTIGKGYAGTIKRYHFSSGRASHGNSRSHNVPGSIGMAQDPGRVFPGK 162 HSP 2 Score: 23.8682 bits (50), Expect = 2.639e-21 Identity = 10/24 (41.67%), Postives = 13/24 (54.17%), Query Frame = 2 Query: 734 PXRVYQGKKMPXRMGGTTXRSEKL 805 P RV+ GK+M MG T + L Sbjct: 155 PGRVFPGKRMTGHMGDVTRTVQNL 178 The following BLAST results are available for this feature:
BLAST of EY711310 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY711310 ID=EY711310; Name=EY711310; organism=Citrus sinensis; type=EST; length=894bpback to top |