EY711310
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY711310 vs. ExPASy Swiss-Prot
Match: RL3_STAHJ (50S ribosomal protein L3 OS=Staphylococcus haemolyticus (strain JCSC1435) GN=rplC PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 7.929e-28 Identity = 61/154 (39.61%), Postives = 87/154 (56.49%), Query Frame = 1 Query: 286 GVMGTKLGMMSYFEXXXXXXXXXXXXFREGNIVTQVKTEATDGYDAVQIGYRRVR--------DKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRXGAMTHGSKSHRQFGSIG 723 G++G K+GM F + N+V Q KTE DGY+A+Q+G+ + +K KP GH +K+G P R ++EFR ++D +E GQ++ + F GD++DV+GT+ GKGFQG IKRH G M HGS HR GS+G Sbjct: 4 GILGRKIGMTQVFGENGELIPVTVVEASQ-NVVLQKKTEEVDGYNAIQVGFEDKKAYKKDAKSNKYANKPAEGHAKKAGAAPKRFIREFRNVNVDEYEVGQEVTVDT-FEAGDIIDVTGTSKGKGFQGAIKRHGQARGPMAHGSHFHRAPGSVG 155 HSP 2 Score: 31.5722 bits (70), Expect = 7.929e-28 Identity = 14/38 (36.84%), Postives = 24/38 (63.16%), Query Frame = 2 Query: 740 RVYQGKKMPXRMGGTTXRSEKLRCKNCN-DXSCVMIKG 850 RV++G+KMP RMGG T + L + + + +++KG Sbjct: 162 RVFKGQKMPGRMGGNTVTVQNLEVVQVDTENNVILVKG 199
BLAST of EY711310 vs. ExPASy Swiss-Prot
Match: RL3_ENTFA (50S ribosomal protein L3 OS=Enterococcus faecalis GN=rplC PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 7.938e-28 Identity = 61/146 (41.78%), Postives = 88/146 (60.27%), Query Frame = 1 Query: 286 GVMGTKLGMMSYFEXXXXXXXXXXXXFREGNIVTQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRXGAMTHGSKSHRQFGSIG 723 G++G K+GM F N+V QVKT TDGY+A+Q+GY+ R+ KP GH+ K+ P R ++EF+ + +E G+++ + +F GD+VDV+GTT GKGFQG IKRH G M+HGS+ HR+ GS+G Sbjct: 4 GILGKKVGMTQIFTESGELIPVTVVEATP-NVVLQVKTVETDGYEAIQVGYQDKREVLSNKPAKGHVAKANTAPKRFIKEFKNVELGEYEVGKEIKVD-VFQAGDVVDVTGTTKGKGFQGAIKRHGQSRGPMSHGSRYHRRPGSMG 147 HSP 2 Score: 26.5646 bits (57), Expect = 7.938e-28 Identity = 14/49 (28.57%), Postives = 27/49 (55.10%), Query Frame = 2 Query: 707 NLGPLVLNTPXRVYQGKKMPXRMGGTTXRSEKLRCKNCN-DXSCVMIKG 850 ++GP+ P RV++ K++ RMGG + L + + + ++IKG Sbjct: 145 SMGPVA---PNRVFKNKRLAGRMGGDRVTIQNLEVVKVDVERNVILIKG 190
BLAST of EY711310 vs. ExPASy Swiss-Prot
Match: RL3_BACSU (50S ribosomal protein L3 OS=Bacillus subtilis GN=rplC PE=3 SV=2) HSP 1 Score: 116.316 bits (290), Expect = 7.938e-28 Identity = 61/146 (41.78%), Postives = 87/146 (59.59%), Query Frame = 1 Query: 286 GVMGTKLGMMSYFEXXXXXXXXXXXXFREGNIVTQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRXGAMTHGSKSHRQFGSIG 723 G++G K+GM F N+V Q KT DGY+A+Q+G+ R+K KPE GH+ K+ P R ++E R +D +E GQ++ E IF+ G++VDV+G + GKGFQG IKRH G M+HGS+ HR+ GS+G Sbjct: 4 GILGRKIGMTQVFAENGDLIPVTVIEAAP-NVVLQKKTAENDGYEAIQLGFDDKREKLSNKPEKGHVAKAETAPKRFVKELRGVEMDAYEVGQEVKVE-IFSAGEIVDVTGVSKGKGFQGAIKRHGQSRGPMSHGSRYHRRPGSMG 147 HSP 2 Score: 29.261 bits (64), Expect = 7.938e-28 Identity = 16/49 (32.65%), Postives = 28/49 (57.14%), Query Frame = 2 Query: 707 NLGPLVLNTPXRVYQGKKMPXRMGGTTXRSEKLRCKNCN-DXSCVMIKG 850 ++GP+ P RV++GK +P RMGG + L + + + ++IKG Sbjct: 145 SMGPV---DPNRVFKGKLLPGRMGGEQITVQNLEIVKVDAERNLLLIKG 190
BLAST of EY711310 vs. ExPASy Swiss-Prot
Match: RL3_PELPD (50S ribosomal protein L3 OS=Pelobacter propionicus (strain DSM 2379) GN=rplC PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 7.938e-28 Identity = 66/148 (44.59%), Postives = 85/148 (57.43%), Query Frame = 1 Query: 286 GVMGTKLGMMSYFEXXXXXXXXXXXXFREGN-IVTQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRXGAMTHGSKSHRQFGSIGA 726 G++G K+GM F + G +VTQ KT + DGY AVQ+G+ +KP LGH KSG R+L+EF+ + G L E+ F GD VDV+GT+IGKGFQG IKR+NFR G +HGS+ HR GSIGA Sbjct: 4 GIIGKKIGMTQIFTEDGTRVPVTV--IQAGPCVVTQKKTASIDGYSAVQVGFDSTPAANASKPMLGHCTKSGQGVFRYLREFKFDAASEMNLGDVLTVEQ-FTAGDFVDVTGTSIGKGFQGVIKRYNFRGGRASHGSRFHRAPGSIGA 148 HSP 2 Score: 30.0314 bits (66), Expect = 7.938e-28 Identity = 15/41 (36.59%), Postives = 25/41 (60.98%), Query Frame = 2 Query: 731 TPXRVYQGKKMPXRMGGTTXRSEKLRCKNCN-DXSCVMIKG 850 TP RV++ KKMP ++G T + L+ + D + ++IKG Sbjct: 151 TPSRVFKNKKMPGQLGNTQVTMQCLQVIRVDADDNLLLIKG 191
BLAST of EY711310 vs. ExPASy Swiss-Prot
Match: RL3_PROM2 (50S ribosomal protein L3 OS=Prochlorococcus marinus (strain MIT 9215) GN=rplC PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 8.720e-28 Identity = 77/200 (38.50%), Postives = 111/200 (55.50%), Query Frame = 1 Query: 283 IGVMGTKLGMMSYFEXXXXXXXXXXXXFREGNIVTQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRXGAMTHGSKSHRQFGSIGAEHS-GPCIPGEEDAXKNGRXNXKIRKAQM*KL-**PFLCNDKRAVPGKPENL 876 IG++G KLGM F+ VTQ+KT A DGY A+QIGY ++K ++KPE GHL KSG ++HL+E+R++ +E G ++ + F G VD+SG ++G+GF G KRH F G M+HGSK+HR GS GA + G PG+ A + G + + K+ L K +VPGKP ++ Sbjct: 3 IGILGKKLGMSQLFDDKGNAVPVTLIEAGPCR-VTQLKTNALDGYTAIQIGYGVSKEKHISKPEKGHLLKSGEELLKHLKEYRVEETSSYEIGNQITVKN-FEVGQKVDISGKSMGRGFSGYQKRHGFSRGPMSHGSKNHRAPGSTGAGTTPGRIYPGKRMAGRYGGKQITTKGLLVLKIDDQKNLLVVKGSVPGKPGSI 200
BLAST of EY711310 vs. ExPASy Swiss-Prot
Match: RL3_CHLSY (50S ribosomal protein L3 OS=Chloroflexus aurantiacus (strain ATCC 29364 / DSM 637 / Y-400-fl) GN=rplC PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.033e-27 Identity = 66/148 (44.59%), Postives = 85/148 (57.43%), Query Frame = 1 Query: 286 GVMGTKLGMMSYFEXXXXXXXXXXXXFREGNIVTQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRXGAMTHG-SKSHRQFGSIGA 726 G++G K+GMM YF IVTQ++T DGY AVQ+GY V +KLTKP+ GHL+ SG +R+L+EF G+ + E+F G VD+SGT+ G+GF G +KRH FR G THG S HR GSIGA Sbjct: 4 GLLGRKIGMMQYFTAQGMAIPVTVIAAGPC-IVTQIRTPERDGYSAVQLGYEEVEPRKLTKPQQGHLKASGGKMLRYLREFSADDPQAHTPGEVVTV-ELFRPGQKVDISGTSKGRGFAGVVKRHGFRGGPKTHGQSDRHRAPGSIGA 149 HSP 2 Score: 28.8758 bits (63), Expect = 1.033e-27 Identity = 12/25 (48.00%), Postives = 17/25 (68.00%), Query Frame = 2 Query: 731 TPXRVYQGKKMPXRMGGTTXRSEKL 805 TP RV++G++M RMGGT + L Sbjct: 152 TPGRVWKGQRMAGRMGGTRVTIQNL 176
BLAST of EY711310 vs. ExPASy Swiss-Prot
Match: RL3_CHLAA (50S ribosomal protein L3 OS=Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl) GN=rplC PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.033e-27 Identity = 66/148 (44.59%), Postives = 85/148 (57.43%), Query Frame = 1 Query: 286 GVMGTKLGMMSYFEXXXXXXXXXXXXFREGNIVTQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRXGAMTHG-SKSHRQFGSIGA 726 G++G K+GMM YF IVTQ++T DGY AVQ+GY V +KLTKP+ GHL+ SG +R+L+EF G+ + E+F G VD+SGT+ G+GF G +KRH FR G THG S HR GSIGA Sbjct: 4 GLLGRKIGMMQYFTAQGMAIPVTVIAAGPC-IVTQIRTPERDGYSAVQLGYEEVEPRKLTKPQQGHLKASGGKMLRYLREFSADDPQAHTPGEVVTV-ELFRPGQKVDISGTSKGRGFAGVVKRHGFRGGPKTHGQSDRHRAPGSIGA 149 HSP 2 Score: 28.8758 bits (63), Expect = 1.033e-27 Identity = 12/25 (48.00%), Postives = 17/25 (68.00%), Query Frame = 2 Query: 731 TPXRVYQGKKMPXRMGGTTXRSEKL 805 TP RV++G++M RMGGT + L Sbjct: 152 TPGRVWKGQRMAGRMGGTRVTIQNL 176
BLAST of EY711310 vs. ExPASy Swiss-Prot
Match: RL3_BACA2 (50S ribosomal protein L3 OS=Bacillus amyloliquefaciens (strain FZB42) GN=rplC PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 1.033e-27 Identity = 61/146 (41.78%), Postives = 87/146 (59.59%), Query Frame = 1 Query: 286 GVMGTKLGMMSYFEXXXXXXXXXXXXFREGNIVTQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRXGAMTHGSKSHRQFGSIG 723 G++G K+GM F N+V Q KT DGY+A+Q+G+ R+K KPE GH+ K+ P R ++E R +D +E GQ++ E IF+ G++VDV+G + GKGFQG IKRH G M+HGS+ HR+ GS+G Sbjct: 4 GILGRKIGMTQVFAENGDLIPVTVIEAAP-NVVLQKKTAENDGYEAIQLGFDDKREKLSNKPEKGHVAKAETAPKRFVKELRGVDMDAYEIGQEVKVE-IFSAGEIVDVTGVSKGKGFQGAIKRHGQSRGPMSHGSRYHRRPGSMG 147 HSP 2 Score: 29.261 bits (64), Expect = 1.033e-27 Identity = 16/49 (32.65%), Postives = 28/49 (57.14%), Query Frame = 2 Query: 707 NLGPLVLNTPXRVYQGKKMPXRMGGTTXRSEKLRCKNCN-DXSCVMIKG 850 ++GP+ P RV++GK +P RMGG + L + + + ++IKG Sbjct: 145 SMGPV---DPNRVFKGKLLPGRMGGDQITVQNLEIVKVDAERNLLLIKG 190
BLAST of EY711310 vs. ExPASy Swiss-Prot
Match: RL3_PROM9 (50S ribosomal protein L3 OS=Prochlorococcus marinus (strain MIT 9312) GN=rplC PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 1.139e-27 Identity = 78/200 (39.00%), Postives = 109/200 (54.50%), Query Frame = 1 Query: 283 IGVMGTKLGMMSYFEXXXXXXXXXXXXFREGNIVTQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRXGAMTHGSKSHRQFGSIGAEHS-GPCIPGEEDAXKNGRXNXKIRKAQM*KL-**PFLCNDKRAVPGKPENL 876 IG++G KLGM F+ VTQ+KT DGY AVQIGY +DK + KPE GHL KSG ++HL+E+R++ +E G ++ + F G VD+SG ++G+GF G KRH F G M+HGSK+HR GS GA + G PG+ A + G + + K+ L K +VPGKP ++ Sbjct: 3 IGILGKKLGMSQLFDDKGNAVPVTLIEAGPCR-VTQLKTTTLDGYSAVQIGYGLSKDKHINKPEKGHLLKSGEELLKHLKEYRVEETTSYEIGNQITVKN-FEVGQKVDISGKSMGRGFAGYQKRHGFSRGPMSHGSKNHRAPGSTGAGTTPGRIYPGKRMAGRYGGKQITTKGLLVLKIDDQKNLLVIKGSVPGKPGSI 200
BLAST of EY711310 vs. ExPASy Swiss-Prot
Match: RL3_NOCSJ (50S ribosomal protein L3 OS=Nocardioides sp. (strain BAA-499 / JS614) GN=rplC PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.343e-27 Identity = 64/148 (43.24%), Postives = 92/148 (62.16%), Query Frame = 1 Query: 286 GVMGTKLGMMSYFEXXXXXXXXXXXXFREGNIVTQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRXGAMTHGS-KSHRQFGSIGA 726 G++GTKLGM ++ N+VTQV+T ATDGY+A+Q+GY + +K+TKP+ GH K+G P RHL E R + GQ+LA + F G+ +DV+GT+ GKGF G +KRH F + +HG+ ++HR+ GSIGA Sbjct: 9 GLLGTKLGMTQVWDENNRVVPVTVIAAGT-NVVTQVRTPATDGYNAIQVGYGEIDGRKVTKPQAGHFGKAGTTPRRHLVEIRTALAADYTVGQELAV-DTFAAGEEIDVTGTSKGKGFAGTMKRHGFAGVSASHGAHRNHRKPGSIGA 154 HSP 2 Score: 25.0238 bits (53), Expect = 1.343e-27 Identity = 10/25 (40.00%), Postives = 16/25 (64.00%), Query Frame = 2 Query: 731 TPXRVYQGKKMPXRMGGTTXRSEKL 805 TP RV++G +M RMG T ++ + Sbjct: 157 TPGRVFKGVRMAGRMGTDTVTTQNV 181 The following BLAST results are available for this feature:
BLAST of EY711310 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY711310 ID=EY711310; Name=EY711310; organism=Citrus sinensis; type=EST; length=894bpback to top |