EY711310
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY711310 vs. ExPASy Swiss-Prot
Match: RL3_PETMO (50S ribosomal protein L3 OS=Petrotoga mobilis (strain DSM 10674 / SJ95) GN=rplC PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 1.345e-27 Identity = 61/147 (41.50%), Postives = 94/147 (63.95%), Query Frame = 1 Query: 286 GVMGTKLGMMSYFEXXXXXXXXXXXXFREGN-IVTQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRXGAMTHGSKSHRQFGSIG 723 G++G K+GM F+ + G +V Q KT TDGY+A+QIG+ + ++K KP +GH +K+ + P+R+L+EFR++++D +E GQK+ IF+EG+ +D+ G + G+G+ G +KR NFR G THGSK HR GS G Sbjct: 3 GILGKKVGMTRVFKDDKAIPVTV---IKAGPCVVVQKKTVETDGYNAIQIGFEEIPERKANKPLMGHFKKAQVKPLRYLREFRVENVDDYEIGQKIDV-TIFSEGEKIDLIGNSKGRGYSGVMKRWNFRGGENTHGSKFHRGLGSTG 145 HSP 2 Score: 23.483 bits (49), Expect = 1.345e-27 Identity = 8/15 (53.33%), Postives = 12/15 (80.00%), Query Frame = 2 Query: 734 PXRVYQGKKMPXRMG 778 P +V++GKKMP + G Sbjct: 150 PSKVFKGKKMPGQYG 164
BLAST of EY711310 vs. ExPASy Swiss-Prot
Match: RL3_GEOTN (50S ribosomal protein L3 OS=Geobacillus thermodenitrificans (strain NG80-2) GN=rplC PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 1.345e-27 Identity = 60/147 (40.82%), Postives = 89/147 (60.54%), Query Frame = 1 Query: 286 GVMGTKLGMMSYFEXXXXXXXXXXXXFREGNIVTQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRXGAMTHGSKSHRQFGSIGA 726 G++G K+GM F N+V Q KT DGY+A+Q+G+ + K+ KP++GH K+ P R ++E R +++ +E GQ++ + IF+EGD+VDV+G + GKGFQG IKRH G M HGS+ HR+ GS+GA Sbjct: 4 GILGRKIGMTQVFAENGDLIPVTVIEATP-NVVLQKKTIENDGYEAIQLGFEDLSTKRANKPQIGHAAKANTAPKRFIREIRGANVNEYEVGQEVKVD-IFSEGDIVDVTGISKGKGFQGVIKRHGQSRGPMAHGSRYHRRPGSMGA 148 HSP 2 Score: 26.9498 bits (58), Expect = 1.345e-27 Identity = 13/40 (32.50%), Postives = 23/40 (57.50%), Query Frame = 2 Query: 734 PXRVYQGKKMPXRMGGTTXRSEKLRCKNCN-DXSCVMIKG 850 P RV++ K +P RMGG + L+ + + + ++IKG Sbjct: 151 PNRVFKTKNLPGRMGGERVTIQNLKIVKVDPERNLLLIKG 190
BLAST of EY711310 vs. ExPASy Swiss-Prot
Match: RL3_BACHD (50S ribosomal protein L3 OS=Bacillus halodurans GN=rplC PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 1.345e-27 Identity = 62/146 (42.47%), Postives = 86/146 (58.90%), Query Frame = 1 Query: 286 GVMGTKLGMMSYFEXXXXXXXXXXXXFREGNIVTQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRXGAMTHGSKSHRQFGSIG 723 G++G K+GM F N+V Q KT +DGY+AVQ+G+ + KPE GH K+ P R ++E R ++D FE GQ++ + F EGD+VDV+GT+ GKGF G IKRHN G M+HGS+ HR+ GS+G Sbjct: 4 GILGKKVGMTQVFAENGDVIPVTVIEAAP-NVVLQKKTVDSDGYEAVQLGFDDQKQNNANKPEKGHAAKAETAPKRFIKEIRGVNLDEFEVGQEIKVDA-FAEGDIVDVTGTSKGKGFAGAIKRHNQARGPMSHGSRYHRRPGSMG 147 HSP 2 Score: 28.8758 bits (63), Expect = 1.345e-27 Identity = 16/49 (32.65%), Postives = 28/49 (57.14%), Query Frame = 2 Query: 707 NLGPLVLNTPXRVYQGKKMPXRMGGTTXRSEKLR-CKNCNDXSCVMIKG 850 ++GP+ P RV++GK +P RMGG + L K + + +++KG Sbjct: 145 SMGPV---DPNRVFKGKALPGRMGGEQVTVQNLEIIKVDAERNLLLVKG 190
BLAST of EY711310 vs. ExPASy Swiss-Prot
Match: RL3_DESHY (50S ribosomal protein L3 OS=Desulfitobacterium hafniense (strain Y51) GN=rplC PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.487e-27 Identity = 73/204 (35.78%), Postives = 111/204 (54.41%), Query Frame = 1 Query: 286 GVMGTKLGMMSYFEXXXXXXXXXXXXFREGNIVTQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRXGAMTHGSKSHRQFGSIGAE-----HSGPCIPGEEDAXKNGRXNXKIRKAQM*KL**PFLCNDKRAVPGKPENLCV 882 G++G K+GM F ++ Q KT+ATDGY+A+Q+G+ +R++ KP+ GH+ K+ + PMR+++EFR+ ++ +E GQ + E+F GD VDV G + GKGF G IKRH G M HGSK HR+ GS+GA+ G +PG + N K+ + K + K AVPG ++L + Sbjct: 7 GILGKKVGMTQVFTEEGHLIPVTVVEAGPCYVI-QKKTKATDGYNAIQVGFGALRERLANKPQKGHVAKASVKPMRYIREFRVDDVEAYEIGQVIT-AELFAAGDAVDVVGISKGKGFAGMIKRHGASRGPMKHGSKYHRRTGSLGAKGPARVFKGRNLPGRMGGERVTVQNLKVVRVDADK----NMILVKGAVPGAKKSLLI 204
BLAST of EY711310 vs. ExPASy Swiss-Prot
Match: RL3_BREBN (50S ribosomal protein L3 OS=Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) GN=rplC PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.487e-27 Identity = 77/200 (38.50%), Postives = 109/200 (54.50%), Query Frame = 1 Query: 286 GVMGTKLGMMSYFEXXXXXXXXXXXXFREGNIVTQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRXGAMTHGSKSHRQFGSIGAEHSGPCIPGEEDAXKNGRXNXKIRKAQM*KL**P-FLCNDKRAVPGKPENLCV 882 G++G KLGM F N+V Q K TDGY+A+QIG+ ++++ KPE GH K+ P R ++E R ++ +E GQ+L +IF EG++VDV+G + GKGFQG IKRHN G M HGS+ HR GS+GA G+ + G N I+ ++ K+ L K +VPG P+N CV Sbjct: 4 GILGKKLGMTQVFGPNGTATAVTVIEVGS-NVVLQKKDVETDGYEAIQIGFEDKKEQRANKPEKGHAAKANTAPKRFIREIRGVNLADYEVGQELK-ADIFAEGEMVDVAGVSKGKGFQGAIKRHNQSRGPMAHGSRYHRGPGSMGAVAPNRVFKGQTLPGQMGGDNVTIQNLEVIKVDTERNLVLVKGSVPG-PKNSCV 200
BLAST of EY711310 vs. ExPASy Swiss-Prot
Match: RL3_NOCFA (50S ribosomal protein L3 OS=Nocardia farcinica GN=rplC PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 2.277e-27 Identity = 61/148 (41.22%), Postives = 90/148 (60.81%), Query Frame = 1 Query: 286 GVMGTKLGMMSYFEXXXXXXXXXXXXFREG-NIVTQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRXGAMTHGSKS-HRQFGSIG 723 G++GTKLGM F+ + G N+VTQ++TE DGY AVQ+ + + +K+ KP G K+G+ P RH+ E R+ FE GQ++ ++F EG VDV+GT+ GKG+ G +KRH FR +HG+++ HR+ GSIG Sbjct: 11 GILGTKLGMTQVFDEKNRVVPVTV--IKAGPNVVTQIRTEERDGYSAVQVAFGAIDPRKVNKPVAGQFAKAGVTPRRHIAEIRVADASSFEVGQEIN-ADVFEEGSYVDVTGTSKGKGYAGTMKRHGFRGQGASHGAQAVHRRPGSIG 155 HSP 2 Score: 26.1794 bits (56), Expect = 2.277e-27 Identity = 13/41 (31.71%), Postives = 22/41 (53.66%), Query Frame = 2 Query: 731 TPXRVYQGKKMPXRMGGTTXRSEKLRCKNCN-DXSCVMIKG 850 TP RV++G +M RMG ++ L + + ++IKG Sbjct: 159 TPGRVFKGMRMAGRMGNDRVTTQNLSVHKVDAENGLLLIKG 199
BLAST of EY711310 vs. ExPASy Swiss-Prot
Match: RL3_STAS1 (50S ribosomal protein L3 OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=rplC PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.278e-27 Identity = 60/154 (38.96%), Postives = 87/154 (56.49%), Query Frame = 1 Query: 286 GVMGTKLGMMSYFEXXXXXXXXXXXXFREGNIVTQVKTEATDGYDAVQIGYRRVR--------DKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRXGAMTHGSKSHRQFGSIG 723 G++G K+GM F + N++ Q K+E DGY+A+Q+GY + K KP GH +K+G P R ++EFR ++D +E GQ+++ F GD++DV+G + GKGFQG IKRHN G M+HGS HR GS+G Sbjct: 4 GILGRKIGMTQVFGENGDLIPVTVVEASQ-NVILQKKSEEIDGYNAIQVGYEDKQAYKKDSRSSKYANKPAEGHAKKAGTAPKRFIREFRNVNVDEYEVGQEVSVNT-FEAGDVIDVTGVSKGKGFQGAIKRHNQARGPMSHGSHFHRAPGSVG 155 HSP 2 Score: 31.5722 bits (70), Expect = 2.278e-27 Identity = 14/38 (36.84%), Postives = 24/38 (63.16%), Query Frame = 2 Query: 740 RVYQGKKMPXRMGGTTXRSEKLRCKNCN-DXSCVMIKG 850 RV++G+KMP RMGG T + L + + + +++KG Sbjct: 162 RVFKGQKMPGRMGGNTVTVQNLEVVQIDAENNVILVKG 199
BLAST of EY711310 vs. ExPASy Swiss-Prot
Match: RL3_ARTS2 (50S ribosomal protein L3 OS=Arthrobacter sp. (strain FB24) GN=rplC PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 2.278e-27 Identity = 62/147 (42.18%), Postives = 89/147 (60.54%), Query Frame = 1 Query: 286 GVMGTKLGMMSYFEXXXXXXXXXXXXFREGNIVTQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRXGAMTHGS-KSHRQFGSIG 723 G++GTKLGM ++ + N++TQ++ DGY AVQIGY ++ +K+TKP GH +K+G+ P RH+ E R +E GQ+L+ E+F G +DV GTT GKGF G +KRH F +HG+ K+HR+ GSIG Sbjct: 9 GLLGTKLGMTQVWDENNKLIPVTVVQ-ADSNVITQLRNADVDGYVAVQIGYGQIDPRKVTKPLAGHFEKAGVTPRRHVVELRTADAAEYELGQELSV-EVFEAGQKIDVVGTTKGKGFAGVMKRHGFHGVGASHGAHKNHRKPGSIG 153 HSP 2 Score: 26.9498 bits (58), Expect = 2.278e-27 Identity = 15/42 (35.71%), Postives = 23/42 (54.76%), Query Frame = 2 Query: 728 NTPXRVYQGKKMPXRMGGTTXRSEKLRCKNCN-DXSCVMIKG 850 +TP RV++G KM RMG + L + + S ++IKG Sbjct: 156 STPSRVFKGMKMAGRMGAVRHTTLNLTVHAVDVEKSLLLIKG 197
BLAST of EY711310 vs. ExPASy Swiss-Prot
Match: RL3_LISW6 (50S ribosomal protein L3 OS=Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334) GN=rplC PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 2.280e-27 Identity = 62/146 (42.47%), Postives = 87/146 (59.59%), Query Frame = 1 Query: 286 GVMGTKLGMMSYFEXXXXXXXXXXXXFREGNIVTQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRXGAMTHGSKSHRQFGSIG 723 G++G K+GM F + N+V Q KT TDGY+AVQIG+ R K KPE GH+ K+ P R ++EFR ++D +E G ++ ++F EGD++D +G + GKGFQG IKRH G M HGS+ HR+ GS+G Sbjct: 4 GILGRKVGMTQVFTENGELIPVTVIEAAQ-NVVLQKKTVETDGYEAVQIGFEDKRAKLSNKPEQGHVAKADTTPKRFIREFRDVNLDEYEIGAEVKV-DVFAEGDIIDATGVSKGKGFQGVIKRHGQSRGPMAHGSRYHRRPGSMG 147 HSP 2 Score: 26.9498 bits (58), Expect = 2.280e-27 Identity = 14/49 (28.57%), Postives = 27/49 (55.10%), Query Frame = 2 Query: 707 NLGPLVLNTPXRVYQGKKMPXRMGGTTXRSEKLRCKNCN-DXSCVMIKG 850 ++GP+ P RV++ K +P RMGG + L + + + +++KG Sbjct: 145 SMGPVA---PNRVFKNKLLPGRMGGEQITIQNLEIVKVDVEKNVLLVKG 190
BLAST of EY711310 vs. ExPASy Swiss-Prot
Match: RL3_LISIN (50S ribosomal protein L3 OS=Listeria innocua GN=rplC PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 2.280e-27 Identity = 62/146 (42.47%), Postives = 87/146 (59.59%), Query Frame = 1 Query: 286 GVMGTKLGMMSYFEXXXXXXXXXXXXFREGNIVTQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRXGAMTHGSKSHRQFGSIG 723 G++G K+GM F + N+V Q KT TDGY+AVQIG+ R K KPE GH+ K+ P R ++EFR ++D +E G ++ ++F EGD++D +G + GKGFQG IKRH G M HGS+ HR+ GS+G Sbjct: 4 GILGRKVGMTQVFTENGELIPVTVIEAAQ-NVVLQKKTVETDGYEAVQIGFEDKRAKLSNKPEQGHVAKADTTPKRFIREFRDVNLDEYEIGAEVKV-DVFAEGDIIDATGVSKGKGFQGVIKRHGQSRGPMAHGSRYHRRPGSMG 147 HSP 2 Score: 26.9498 bits (58), Expect = 2.280e-27 Identity = 14/49 (28.57%), Postives = 27/49 (55.10%), Query Frame = 2 Query: 707 NLGPLVLNTPXRVYQGKKMPXRMGGTTXRSEKLRCKNCN-DXSCVMIKG 850 ++GP+ P RV++ K +P RMGG + L + + + +++KG Sbjct: 145 SMGPVA---PNRVFKNKLLPGRMGGEQITIQNLEIVKVDVEKNVLLVKG 190 The following BLAST results are available for this feature:
BLAST of EY711310 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY711310 ID=EY711310; Name=EY711310; organism=Citrus sinensis; type=EST; length=894bpback to top |