EY711306
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY711306 vs. ExPASy Swiss-Prot
Match: EPAB_XENTR (Embryonic polyadenylate-binding protein OS=Xenopus tropicalis GN=epabp PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.842e-17 Identity = 74/230 (32.17%), Postives = 108/230 (46.96%), Query Frame = 1 Query: 16 AIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISEDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD----KGFGFVRYSTHPEASLAIQMGNARILCGKPI 678 AI T+NG + + + V + +RE G NV++ + ++ D L FS F +VM D TGRSRGFGFV++ N E+AQ A++++NGK + R I A K E+Q EL + QE+ N Q +YV NL + L + F GTI +V + KGFGFV +S+ EA+ A+ N RI+ KP+ Sbjct: 154 AIQTMNGMLLNDRKVFVGHFKSRRERELEYGAKVMEFTNVYIKNFGEDMDDKRLREIFSAFGNTLSVKVMMDD-TGRSRGFGFVNYGNHEEAQKAVSEMNGKEVNGRMIYVGRAQKRI----ERQG-------ELKRKFEQIKQERI------NRYQGVNLYVKNLDDGIDDDRLRKEFSP--YGTITSAKVMTEGGHSKGFGFVCFSSPEEATKAVTEMNGRIVSTKPL 363 HSP 2 Score: 83.5741 bits (205), Expect = 1.724e-15 Identity = 71/234 (30.34%), Postives = 102/234 (43.59%), Query Frame = 1 Query: 1 ADAWAAIVTLNGRHIFGQPIKVNWAYASSQRED---TSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISEDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQ-----RDKGFGFVRYSTHPEASLAIQMGNARILCGKPI 678 ADA A+ T+N I G+PI++ W SQR+ SG NVF+ +L + + L+ FS F +V+ D+ SRG+GFV F QE A AI +NG L +R++ S E++ V+E TN VY+ N ++ L F A G V+V R +GFGFV Y H EA A+ N + + G+ I Sbjct: 63 ADAERALDTMNFEVIKGRPIRIMW----SQRDPGLRKSGVGNVFIKNLDESIDNKALYDTFSAFGNILSCKVVCDEHG--SRGYGFVHFETQEAANRAIQTMNGMLLNDRKV----FVGHFKSRRERELEYGAKVMEFTN-----------------------VYIKNFGEDMDDKRLREIFSAF--GNTLSVKVMMDDTGRSRGFGFVNYGNHEEAQKAVSEMNGKEVNGRMI 261
BLAST of EY711306 vs. ExPASy Swiss-Prot
Match: PABP3_HUMAN (Polyadenylate-binding protein 3 OS=Homo sapiens GN=PABPC3 PE=1 SV=2) HSP 1 Score: 88.9669 bits (219), Expect = 4.104e-17 Identity = 72/230 (31.30%), Postives = 108/230 (46.96%), Query Frame = 1 Query: 16 AIVTLNGRHIFGQPIKVNWAYASSQREDTSGHF-----NVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISEDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEASLAIQMGNARILCGKPI 678 AI +NG + G+ + V + +RE G NV++ + ++ D L F F +VM D+ +G+S+GFGFVSF EDAQ A++++NGK L +QI A K E+Q+ EL + Q++ Q +YV NL + L + F GTI +V R KGFGFV +S+ EA+ A+ N RI+ KP+ Sbjct: 154 AIKKMNGMLLNGRKVFVGQFKSRKEREAELGARAKEFPNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKV----ERQT-------ELKRTFEQMKQDRI------TRYQVVNLYVKNLDDGIDDERLRKAFSPF--GTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPL 363
BLAST of EY711306 vs. ExPASy Swiss-Prot
Match: EPABB_XENLA (Embryonic polyadenylate-binding protein B OS=Xenopus laevis GN=epabp-B PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 9.144e-17 Identity = 72/230 (31.30%), Postives = 107/230 (46.52%), Query Frame = 1 Query: 16 AIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISEDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD----KGFGFVRYSTHPEASLAIQMGNARILCGKPI 678 AI T+NG + + + V + +RE G NV++ + ++ D L FS F +VM D +GRSRGFGFV++ N E+AQ A+ ++NGK + R + A K E+Q EL + QE+ N Q +YV NL + L + F GTI +V + KGFGFV +S+ EA+ A+ N RI+ KP+ Sbjct: 154 AIQTMNGMLLNDRKVFVGHFKSRRERELEYGAKVMEFTNVYIKNFGEDMDDKRLKEIFSAFGNTLSVKVMMDN-SGRSRGFGFVNYGNHEEAQKAVTEMNGKEVNGRMVYVGRAQKRI----ERQG-------ELKRKFEQIKQERI------NRYQGVNLYVKNLDDGIDDDRLRKEFSP--YGTITSTKVMTEGGHSKGFGFVCFSSPEEATKAVTEMNGRIVSTKPL 363 HSP 2 Score: 81.6481 bits (200), Expect = 6.553e-15 Identity = 70/234 (29.91%), Postives = 102/234 (43.59%), Query Frame = 1 Query: 1 ADAWAAIVTLNGRHIFGQPIKVNWAYASSQRED---TSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISEDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQ-----RDKGFGFVRYSTHPEASLAIQMGNARILCGKPI 678 ADA A+ T+N I G+PI++ W SQR+ SG NVF+ +L + + L+ FS F +V+ D+ SRG+GFV F QE A AI +NG L +R++ S E++ V+E TN VY+ N ++ L F A G V+V R +GFGFV Y H EA A+ N + + G+ + Sbjct: 63 ADAERALDTMNFEVIKGRPIRIMW----SQRDPGLRKSGVGNVFIKNLDDSIDNKALYDTFSAFGDILSCKVVCDEYG--SRGYGFVHFETQEAANRAIQTMNGMLLNDRKV----FVGHFKSRRERELEYGAKVMEFTN-----------------------VYIKNFGEDMDDKRLKEIFSAF--GNTLSVKVMMDNSGRSRGFGFVNYGNHEEAQKAVTEMNGKEVNGRMV 261
BLAST of EY711306 vs. ExPASy Swiss-Prot
Match: PABP1_MOUSE (Polyadenylate-binding protein 1 OS=Mus musculus GN=Pabpc1 PE=1 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 1.194e-16 Identity = 71/230 (30.87%), Postives = 107/230 (46.52%), Query Frame = 1 Query: 16 AIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISEDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEASLAIQMGNARILCGKPI 678 AI +NG + + + V + +RE G NV++ + ++ D L F F +VM D+ +G+S+GFGFVSF EDAQ A++++NGK L +QI A K E+Q+ EL + Q++ Q +YV NL + L + F GTI +V R KGFGFV +S+ EA+ A+ N RI+ KP+ Sbjct: 154 AIEKMNGMLLNDRKVFVGRFKSQKEREAELGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKV----ERQT-------ELKRKFEQMKQDRI------TRYQGVNLYVKNLDDGIDDERLRKEFSPF--GTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPL 363
BLAST of EY711306 vs. ExPASy Swiss-Prot
Match: PABP1_RAT (Polyadenylate-binding protein 1 OS=Rattus norvegicus GN=Pabpc1 PE=2 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.560e-16 Identity = 71/230 (30.87%), Postives = 107/230 (46.52%), Query Frame = 1 Query: 16 AIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISEDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEASLAIQMGNARILCGKPI 678 AI +NG + + + V + +RE G NV++ + ++ D L F F +VM D+ +G+S+GFGFVSF EDAQ A++++NGK L +QI A K E+Q+ EL + Q++ Q +YV NL + L + F GTI +V R KGFGFV +S+ EA+ A+ N RI+ KP+ Sbjct: 154 AIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKV----ERQT-------ELKRKFEQMKQDRI------TRYQGVNLYVKNLDDGIDDERLRKEFSPF--GTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPL 363
BLAST of EY711306 vs. ExPASy Swiss-Prot
Match: PABP1_PONAB (Polyadenylate-binding protein 1 OS=Pongo abelii GN=PABPC1 PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 2.037e-16 Identity = 71/230 (30.87%), Postives = 107/230 (46.52%), Query Frame = 1 Query: 16 AIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISEDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEASLAIQMGNARILCGKPI 678 AI +NG + + + V + +RE G NV++ + ++ D L F F +VM D+ +G+S+GFGFVSF EDAQ A++++NGK L +QI A K E+Q+ EL + Q++ Q +YV NL + L + F GTI +V R KGFGFV +S+ EA+ A+ N RI+ KP+ Sbjct: 154 AIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKV----ERQT-------ELKRKFEQMKQDRI------TRYQGVNLYVKNLDDGIDDERLRKEFSPF--GTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPL 363
BLAST of EY711306 vs. ExPASy Swiss-Prot
Match: PABP1_HUMAN (Polyadenylate-binding protein 1 OS=Homo sapiens GN=PABPC1 PE=1 SV=2) HSP 1 Score: 86.6557 bits (213), Expect = 2.037e-16 Identity = 71/230 (30.87%), Postives = 107/230 (46.52%), Query Frame = 1 Query: 16 AIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISEDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEASLAIQMGNARILCGKPI 678 AI +NG + + + V + +RE G NV++ + ++ D L F F +VM D+ +G+S+GFGFVSF EDAQ A++++NGK L +QI A K E+Q+ EL + Q++ Q +YV NL + L + F GTI +V R KGFGFV +S+ EA+ A+ N RI+ KP+ Sbjct: 154 AIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKV----ERQT-------ELKRKFEQMKQDRI------TRYQGVNLYVKNLDDGIDDERLRKEFSPF--GTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPL 363
BLAST of EY711306 vs. ExPASy Swiss-Prot
Match: PABP1_BOVIN (Polyadenylate-binding protein 1 OS=Bos taurus GN=PABPC1 PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 2.037e-16 Identity = 71/230 (30.87%), Postives = 107/230 (46.52%), Query Frame = 1 Query: 16 AIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISEDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEASLAIQMGNARILCGKPI 678 AI +NG + + + V + +RE G NV++ + ++ D L F F +VM D+ +G+S+GFGFVSF EDAQ A++++NGK L +QI A K E+Q+ EL + Q++ Q +YV NL + L + F GTI +V R KGFGFV +S+ EA+ A+ N RI+ KP+ Sbjct: 154 AIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKV----ERQT-------ELKRKFEQMKQDRI------TRYQGVNLYVKNLDDGIDDERLRKEFSPF--GTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPL 363
BLAST of EY711306 vs. ExPASy Swiss-Prot
Match: PABP4_HUMAN (Polyadenylate-binding protein 4 OS=Homo sapiens GN=PABPC4 PE=1 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 7.741e-16 Identity = 68/234 (29.06%), Postives = 106/234 (45.30%), Query Frame = 1 Query: 1 ADAWAAIVTLNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISEDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD-----KGFGFVRYSTHPEASLAIQMGNARILCGKPI 678 ADA A+ T+N I G+PI++ W SQR+ + SG NVF+ +L + + L+ FS F +V+ D+ S+G+ FV F QE A AI +NG L +R++ + + + + + +K+ ++T VY+ N EV L F G V+V RD KGFGFV Y H +A+ A++ N + + GK I Sbjct: 63 ADAERALDTMNFDVIKGKPIRIMW----SQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKV---FVGRFKSRKEREAELGAKA------------------------KEFTNVYIKNFGEEVDDESLKELFSQF--GKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKII 261 HSP 2 Score: 81.2629 bits (199), Expect = 8.558e-15 Identity = 69/230 (30.00%), Postives = 105/230 (45.65%), Query Frame = 1 Query: 16 AIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISEDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEASLAIQMGNARILCGKPI 678 AI +NG + + + V + +RE G NV++ + EV D +L FS F +VM D G+S+GFGFVS+ EDA A+ ++NGK + + I A K E+Q+ EL + QE+ + Q +Y+ NL + L + F G+I +V R KGFGFV +S+ EA+ A+ N RI+ KP+ Sbjct: 154 AIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPN-GKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKV----ERQA-------ELKRKFEQLKQERI------SRYQGVNLYIKNLDDTIDDEKLRKEFSPF--GSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPL 363
BLAST of EY711306 vs. ExPASy Swiss-Prot
Match: PABP_PICGU (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Pichia guilliermondii GN=PAB1 PE=3 SV=2) HSP 1 Score: 84.3445 bits (207), Expect = 1.011e-15 Identity = 72/235 (30.64%), Postives = 109/235 (46.38%), Query Frame = 1 Query: 7 AWAAIVTLNGRHIFGQPIKVNWAYASSQREDT-----SGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDE-KQSSDSKSVVELTNGISEDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD-----KGFGFVRYSTHPEASLAIQMGNARILCGKPI 678 A AAI +NG + + + V + RE + NV+V +L+PEV +A F F + + DQ+ G+SRGFGFV+F N E A +A+ ++N K + +++ A K DE K+ +S + +L + Q ++V NL + S L F GTI RV D KGFGFV +S+ EA+ AI N R++ GKP+ Sbjct: 199 AEAAIENVNGMLLNDREVFVGKHVSKRDRESKFEEMKANFTNVYVKNLAPEVDNAKFEEIFKPFGPVTSVHLETDQE-GKSRGFGFVNFENHESALNAVKEMNDKEIDGQKLYVGRAQKKRERLDELKRLYESTRLEKL------------------SKYQGVNLFVKNLDDSIDSEKLEEEFKPF--GTITSARVMVDDAGKSKGFGFVCFSSPEEATKAITEMNQRMIQGKPL 412 HSP 2 Score: 77.7962 bits (190), Expect = 9.462e-14 Identity = 64/234 (27.35%), Postives = 106/234 (45.30%), Query Frame = 1 Query: 1 ADAWAAIVTLNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISEDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD-----KGFGFVRYSTHPEASLAIQMGNARILCGKPI 678 AD AI LN + G+P ++ W SQR+ + +G N+F+ +L P + + L FS F +V D+ G+S+ FGFV + E A++AI ++NG L +R+ V + +S+ +E E+ N +T VYV NL+ EV + F G + V ++ D +GFGFV + H A A++ N + + G+ + Sbjct: 110 ADGSRAIEELNYSLVDGRPCRIMW----SQRDPSLRRNGDGNIFIKNLHPAIDNKALHDTFSAFGRILSCKVATDE-LGQSKCFGFVHYETAEAAEAAIENVNGMLLNDRE------------------------VFVGKHVSKRDRESKFEEMKAN---FTNVYVKNLAPEVDNAKFEEIFKPF--GPVTSVHLETDQEGKSRGFGFVNFENHESALNAVKEMNDKEIDGQKL 309 The following BLAST results are available for this feature:
BLAST of EY711306 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 77
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY711306 ID=EY711306; Name=EY711306; organism=Citrus sinensis; type=EST; length=901bpback to top |