EY711306

Overview
NameEY711306
Unique NameEY711306
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length901
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY711306 vs. ExPASy Swiss-Prot
Match: PABP3_ARATH (Polyadenylate-binding protein 3 OS=Arabidopsis thaliana GN=PAB3 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.320e-15
Identity = 63/221 (28.51%), Postives = 98/221 (44.34%), Query Frame = 1
Query:    4 DAWAAIVTLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISEDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKG-----FGFVRYSTHPEASLAIQMGN 651
            DA+ A+  LN   +F +PI++  +         SG  N+F+ +L   + +  LF  FS F T    +V  D  TGRS+G+GFV F  +E AQ+AI+ LNG  + ++Q+                                  +   +E+ P   P++T VYV NL  E+   +L + F     G I    V RD+      FGFV +     A+ A++  N
Sbjct:  101 DAYRAMEALNYTPLFDRPIRIMLSNRDPSTR-LSGKGNIFIKNLDASIDNKALFETFSSFGTILSCKVAMDV-TGRSKGYGFVQFEKEESAQAAIDKLNGMLMNDKQV-------------------------FVGHFIRRQERARDENTP--TPRFTNVYVKNLPKEIGEDELRKTFGKF--GVISSAVVMRDQSGNSRCFGFVNFECTEAAASAVEKMN 290          
BLAST of EY711306 vs. ExPASy Swiss-Prot
Match: PAP1L_HUMAN (Polyadenylate-binding protein 1-like OS=Homo sapiens GN=PABPC1L PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.842e-15
Identity = 70/232 (30.17%), Postives = 101/232 (43.53%), Query Frame = 1
Query:    1 ADAWAAIVTLNGRHIFGQPIKVNWAYASSQRED---TSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISEDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKG-----FGFVRYSTHPEASLAIQMGNARILCGK 672
            ADA  A+ T+N   + GQPI++ W    SQR+     SG  N+F+ +L   + +  L+  FS F      +V  D+    SRGFGFV F   E AQ AIN +NG  L +R++          S  E+++      +E TN                       +YV NL  +V    L   F     G +  V+V RD       FGFV +  H EA  A+   N + + G+
Sbjct:   63 ADAERALDTMNFEMLKGQPIRIMW----SQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCKVACDEHG--SRGFGFVHFETHEAAQQAINTMNGMLLNDRKV----FVGHFKSRREREAELGARALEFTN-----------------------IYVKNLPVDVDEQGLQDLFSQF--GKMLSVKVMRDNSGHSRCFGFVNFEKHEEAQKAVVHMNGKEVSGR 259          

HSP 2 Score: 73.9442 bits (180), Expect = 1.366e-12
Identity = 69/231 (29.87%), Postives = 103/231 (44.59%), Query Frame = 1
Query:    7 AWAAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISEDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQ--RDKGFGFVRYSTHPEASLAIQMGNARILCGKPI 678
            A  AI T+NG  +  + + V    +  +RE   G       N++V +L  +V +  L   FS F      +VM D  +G SR FGFV+F   E+AQ A+  +NGK +  R +    A K      E+Q+       EL     +  Q++          Q   +YV NL   +    L + F    V T   V  +    KGFGFV +S+  EA+ A+   N RI+  KP+
Sbjct:  151 AQQAINTMNGMLLNDRKVFVGHFKSRREREAELGARALEFTNIYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDN-SGHSRCFGFVNFEKHEEAQKAVVHMNGKEVSGRLLYAGRAQKRV----ERQN-------ELKRRFEQMKQDRL------RRYQGVNLYVKNLDDSIDDDKLRKEFSPYGVITSAKVMTEGGHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPL 363          
BLAST of EY711306 vs. ExPASy Swiss-Prot
Match: PABPB_XENLA (Polyadenylate-binding protein 1-B OS=Xenopus laevis GN=pabpc1-B PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 6.553e-15
Identity = 70/230 (30.43%), Postives = 104/230 (45.22%), Query Frame = 1
Query:   16 AIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISEDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEASLAIQMGNARILCGKPI 678
            AI  +NG  +  + + V    +  +RE   G       NV++ +   ++ D  L   F  +      +VM D   G+SRGFGFVSF   EDAQ A++D+NGK L  + I    A K      E+Q+       EL     +  Q++          Q   +YV NL   +    L + F     G+I   +V     R KGFGFV +S+  EA+ A+   N RI+  KP+
Sbjct:  154 AIDKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKEWFGQYGAALSVKVMTDDH-GKSRGFGFVSFERHEDAQKAVDDMNGKDLNGKAIFVGRAQKKV----ERQT-------ELKRKFEQMKQDRI------TRYQGVNLYVKNLDDGIDDERLRKEFTPF--GSITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPL 363          

HSP 2 Score: 77.411 bits (189), Expect = 1.236e-13
Identity = 68/230 (29.57%), Postives = 107/230 (46.52%), Query Frame = 1
Query:    1 ADAWAAIVTLNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTN-GISEDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEASLAIQMGNARILCGKPI 678
            ADA  A+ T+N   I G+P+++ W    SQR+ +   SG  N+F+ +L   + +  L+  FS F      +V+ D+    S+G+GFV F  QE A+ AI+ +NG  L +R++          S  E+++       E TN  I   G++  +E   E   QY       LS +V + D     H             + +GFGFV +  H +A  A+   N + L GK I
Sbjct:   63 ADAERALDTMNFDVIKGKPVRIMW----SQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIDKMNGMLLNDRKV----FVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKEWFGQYGAA----LSVKVMTDD-----HG------------KSRGFGFVSFERHEDAQKAVDDMNGKDLNGKAI 261          
BLAST of EY711306 vs. ExPASy Swiss-Prot
Match: PABP_PICST (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Pichia stipitis GN=PAB1 PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 8.558e-15
Identity = 68/233 (29.18%), Postives = 106/233 (45.49%), Query Frame = 1
Query:    4 DAWAAIVTLNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISEDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD-----KGFGFVRYSTHPEASLAIQMGNARILCGKPI 678
            D   AI  LN   I G+P ++ W    SQR+ +   SG  N+F+ +L P + +  L   FS F      +V  D   G+S+ FGFV +   E A++AI ++NG  L +R+                        V +   IS+  +E   E+   N   +T +YV N+  E +  DL + F     G I  + +++D     KGFGFV Y  H  A  A++  N + + G+ I
Sbjct:  105 DGEKAIEELNYSPIEGRPCRIMW----SQRDPSARRSGDGNIFIKNLHPAIDNKALHDTFSTFGKILSCKVATDDM-GQSKCFGFVHYETAEAAEAAIENVNGMLLNDRE------------------------VFVGKHISKKDRESKFEEIKAN---FTNIYVKNIDLEYSEEDLKKLFTP--YGAITSIYLEKDAEGKSKGFGFVNYEGHEAAVKAVEELNDKEINGQKI 303          

HSP 2 Score: 67.781 bits (164), Expect = 9.792e-11
Identity = 61/234 (26.07%), Postives = 101/234 (43.16%), Query Frame = 1
Query:    7 AWAAIVTLNGRHIFGQPIKVNWAYASSQREDT-----SGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISEDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD-----KGFGFVRYSTHPEASLAIQMGNARILCGKPI 678
            A AAI  +NG  +  + + V    +   RE       +   N++V ++  E ++  L   F+ +   +   +  D + G+S+GFGFV++   E A  A+ +LN K +  ++I    A K     +E +     + +E                   +  Q   +++ NL   + S  L   F     GTI   RV  D     KGFGFV +S+  EA+ AI   N R+  GKP+
Sbjct:  193 AEAAIENVNGMLLNDREVFVGKHISKKDRESKFEEIKANFTNIYVKNIDLEYSEEDLKKLFTPYGAITSIYLEKDAE-GKSKGFGFVNYEGHEAAVKAVEELNDKEINGQKIYVGRAQKKRERMEELKKQYENTRLEKL-----------------SKYQGVNLFIKNLDDTIDSEKLEEEFKPF--GTITSARVMVDETGKSKGFGFVCFSSPEEATKAITEMNQRMFFGKPL 406          
BLAST of EY711306 vs. ExPASy Swiss-Prot
Match: SF3B4_RAT (Splicing factor 3B subunit 4 OS=Rattus norvegicus GN=Sf3b4 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.118e-14
Identity = 50/153 (32.68%), Postives = 87/153 (56.86%), Query Frame = 1
Query:    4 DAWAAIVTLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDA-RVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISE-DGQEKSNEDAP 456
            DA  AI  +N   ++G+PI+VN A A ++  D     N+F+G+L PE+ +  L+  FS F       ++M D  TG S+G+ F++F + + + +AI  +NG++L NR I  ++A K  + G E+  S ++ ++   N +S+ D   +   DAP
Sbjct:   66 DADYAIKIMNMIKLYGKPIRVNKASAHNKNLDVGA--NIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKDSKG-ERHGSAAERLLAAQNPLSQADRPHQLFADAP 215          
BLAST of EY711306 vs. ExPASy Swiss-Prot
Match: SF3B4_MOUSE (Splicing factor 3B subunit 4 OS=Mus musculus GN=Sf3b4 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.118e-14
Identity = 50/153 (32.68%), Postives = 87/153 (56.86%), Query Frame = 1
Query:    4 DAWAAIVTLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDA-RVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISE-DGQEKSNEDAP 456
            DA  AI  +N   ++G+PI+VN A A ++  D     N+F+G+L PE+ +  L+  FS F       ++M D  TG S+G+ F++F + + + +AI  +NG++L NR I  ++A K  + G E+  S ++ ++   N +S+ D   +   DAP
Sbjct:   66 DADYAIKIMNMIKLYGKPIRVNKASAHNKNLDVGA--NIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKDSKG-ERHGSAAERLLAAQNPLSQADRPHQLFADAP 215          
BLAST of EY711306 vs. ExPASy Swiss-Prot
Match: SF3B4_HUMAN (Splicing factor 3B subunit 4 OS=Homo sapiens GN=SF3B4 PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.118e-14
Identity = 50/153 (32.68%), Postives = 87/153 (56.86%), Query Frame = 1
Query:    4 DAWAAIVTLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDA-RVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISE-DGQEKSNEDAP 456
            DA  AI  +N   ++G+PI+VN A A ++  D     N+F+G+L PE+ +  L+  FS F       ++M D  TG S+G+ F++F + + + +AI  +NG++L NR I  ++A K  + G E+  S ++ ++   N +S+ D   +   DAP
Sbjct:   66 DADYAIKIMNMIKLYGKPIRVNKASAHNKNLDVGA--NIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKDSKG-ERHGSAAERLLAAQNPLSQADRPHQLFADAP 215          
BLAST of EY711306 vs. ExPASy Swiss-Prot
Match: SF3B4_CAEEL (Splicing factor 3B subunit 4 OS=Caenorhabditis elegans GN=sap-49 PE=1 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 1.118e-14
Identity = 51/172 (29.65%), Postives = 88/172 (51.16%), Query Frame = 1
Query:    4 DAWAAIVTLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDA-RVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISEDGQEKSNEDAPENNPQYTTVYVGNLSSEVTS 516
            DA  AI  LN   ++G+PIKVN A A  +  D     N+FVG+L PEV +  L+  FS F       ++M D  +G S+GF F++F + E + +A+  +NG++L NR I  ++A K  + G+   ++  + +        +D   +   D P   P  T + +  + + + +
Sbjct:   66 DADYAIKILNMIKLYGKPIKVNKASAHEKNMDVGA--NIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASDTALEAMNGQFLCNRAITVSYAFKRDSKGERHGTAAERMLAAQNPLFPKDRPHQVFSDVPLGVPANTPLAMPGVHAAIAA 235          
BLAST of EY711306 vs. ExPASy Swiss-Prot
Match: PABPA_XENLA (Polyadenylate-binding protein 1-A OS=Xenopus laevis GN=pabpc1-A PE=1 SV=3)

HSP 1 Score: 80.8777 bits (198), Expect = 1.118e-14
Identity = 68/230 (29.57%), Postives = 105/230 (45.65%), Query Frame = 1
Query:   16 AIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISEDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEASLAIQMGNARILCGKPI 678
            AI  +NG  +  + + V    +  +RE   G       NV++ +   ++ D  L   F  +      +VM D   G+S+GFGFVSF   EDAQ A++++NGK +  + +    A K      E+Q+       EL     +  Q++          Q   +YV NL   +    L + F  L  GTI   +V     R KGFGFV +S+  EA+ A+   N RI+  KP+
Sbjct:  154 AIDKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGDDMNDERLKEMFGKYGPALSVKVMTDDN-GKSKGFGFVSFERHEDAQKAVDEMNGKDMNGKSMFVGRAQKKV----ERQT-------ELKRKFEQMKQDRI------TRYQGVNLYVKNLDDGIDDERLRKEF--LPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPL 363          

HSP 2 Score: 77.0258 bits (188), Expect = 1.614e-13
Identity = 64/231 (27.71%), Postives = 104/231 (45.02%), Query Frame = 1
Query:    1 ADAWAAIVTLNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISEDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHF----HALCVGTIEDVRVQRDKGFGFVRYSTHPEASLAIQMGNARILCGK 672
            ADA  A+ T+N   I G+P+++ W    SQR+ +   SG  N+F+ +L   + +  L+  FS F      +V+ D+    S+G+GFV F  QE A+ AI+ +NG  L +R++                            G  +  +E+  E       ++T VY+ N   ++    L   F     AL V  + D    + KGFGFV +  H +A  A+   N + + GK
Sbjct:   63 ADAERALDTMNFDVIKGRPVRIMW----SQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIDKMNGMLLNDRKVFV--------------------------GRFKSRKEREAE-LGARAKEFTNVYIKNFGDDMNDERLKEMFGKYGPALSVKVMTDDN-GKSKGFGFVSFERHEDAQKAVDEMNGKDMNGK 259          
BLAST of EY711306 vs. ExPASy Swiss-Prot
Match: PABP_LODEL (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Lodderomyces elongisporus GN=PAB1 PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.460e-14
Identity = 65/233 (27.90%), Postives = 102/233 (43.78%), Query Frame = 1
Query:    4 DAWAAIVTLNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISEDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD-----KGFGFVRYSTHPEASLAIQMGNARILCGKPI 678
            D   AI  LN   + G+P ++ W    SQR+ +   SG  N+F+ +L P + +  L   FS F      +V  D   G+S+ FGFV +  +E AQ+AI  +NG  L +R++           G      D +S +E                  E    YT +YV N+    T  +    F     G I  + +++D     KGFGFV +  H  A+ A++  N + + G+ I
Sbjct:  120 DGEKAIEELNYTPVEGRPCRIMW----SQRDPSARRSGDGNIFIKNLHPAIDNKALHDTFSAFGKILSVKVATDD-LGQSKCFGFVHYETEEAAQAAIESVNGMLLNDREVYV---------GKHVSKKDRESKLE------------------EMKANYTNIYVKNIDLAYTEKEFEELFAPF--GKITSIYLEKDAEGKSKGFGFVNFEEHEAAAKAVEELNDKEINGQKI 318          

HSP 2 Score: 70.8626 bits (172), Expect = 1.157e-11
Identity = 64/235 (27.23%), Postives = 106/235 (45.11%), Query Frame = 1
Query:    7 AWAAIVTLNGRHIFGQPIKVNWAYASSQREDT-----SGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDE-KQSSDSKSVVELTNGISEDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD-----KGFGFVRYSTHPEASLAIQMGNARILCGKPI 678
            A AAI ++NG  +  + + V    +   RE       + + N++V ++    T+      F+ F   +   +  D + G+S+GFGFV+F   E A  A+ +LN K +  ++I    A K     +E K+  ++  + +L                  +  Q   ++V NL  ++ S  L   F     GTI   +V  D     KGFGFV +ST  EA+ AI   N R++ GKP+
Sbjct:  208 AQAAIESVNGMLLNDREVYVGKHVSKKDRESKLEEMKANYTNIYVKNIDLAYTEKEFEELFAPFGKITSIYLEKDAE-GKSKGFGFVNFEEHEAAAKAVEELNDKEINGQKIYVGRAQKKRERTEELKKQYEAVRLEKL------------------SKYQGVNLFVKNLDEQIDSEKLEEEFKPF--GTITSSKVMVDDAGKSKGFGFVCFSTPEEATKAITEMNQRMVNGKPL 421          
The following BLAST results are available for this feature:
BLAST of EY711306 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 77
Match NameE-valueIdentityDescription
PABP3_ARATH1.320e-1528.51Polyadenylate-binding protein 3 OS=Arabidopsis tha... [more]
PAP1L_HUMAN3.842e-1530.17Polyadenylate-binding protein 1-like OS=Homo sapie... [more]
PABPB_XENLA6.553e-1530.43Polyadenylate-binding protein 1-B OS=Xenopus laevi... [more]
PABP_PICST8.558e-1529.18Polyadenylate-binding protein, cytoplasmic and nuc... [more]
SF3B4_RAT1.118e-1432.68Splicing factor 3B subunit 4 OS=Rattus norvegicus ... [more]
SF3B4_MOUSE1.118e-1432.68Splicing factor 3B subunit 4 OS=Mus musculus GN=Sf... [more]
SF3B4_HUMAN1.118e-1432.68Splicing factor 3B subunit 4 OS=Homo sapiens GN=SF... [more]
SF3B4_CAEEL1.118e-1429.65Splicing factor 3B subunit 4 OS=Caenorhabditis ele... [more]
PABPA_XENLA1.118e-1429.57Polyadenylate-binding protein 1-A OS=Xenopus laevi... [more]
PABP_LODEL1.460e-1427.90Polyadenylate-binding protein, cytoplasmic and nuc... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-006-B12-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY711306 ID=EY711306; Name=EY711306; organism=Citrus sinensis; type=EST; length=901bp
GCGGACGCGTGGGCTGCAATTGTGACTCTTAATGGAAGGCACATATTTGG
ACAACCTATTAAAGTAAACTGGGCTTATGCTAGCAGCCAGAGAGAGGACA
CATCAGGTCATTTCAACGTTTTTGTTGGTGATCTTAGCCCTGAAGTTACA
GATGCTACTTTGTTTGCGTGCTTCTCTGTGTTTCCTACTTGTTCGGATGC
AAGGGTTATGTGGGACCAAAAGACTGGGCGTTCAAGGGGTTTTGGGTTTG
TTTCTTTTCGGAATCAGGAGGATGCCCAAAGTGCAATAAATGACTTAAAT
GGGAAGTGGCTTGGTAATAGACAGATTCGGTGCAACTGGGCTGCAAAAGG
TGCTACCTCTGGTGATGAAAAGCAAAGTTCAGATTCCAAAAGTGTTGTAG
AGCTTACAAATGGAATATCTGAAGATGGTCAAGAGAAGAGCAATGAGGAT
GCTCCGGAGAACAATCCTCAGTATACAACTGTTTATGTTGGCAATCTTTC
TTCAGAGGTTACCTCAGTTGATCTCCACCGACATTTTCATGCTCTTTGTG
TTGGAACAATTGAAGATGTTCGGGTACAGCGAGACAAGGGTTTCGGGTTT
GTGAGATACTCTACACATCCTGAAGCTTCCCTGGCTATTCAGATGGGTAA
TGCTCGGATTCTTTGCGGCAAACCAATTAAGTGTTCGTGGGGAAGTAAAC
CAACTCCCCCAGGAACAGCTCTACTCCTCTTCCTCCACCTCCTGCACCAC
ATTTGTCAGGTTTCTCAGCCACAGACCTTCCCTGCTATGAGCGACAGATA
CCTTTGACACAATAGCTGGGGCACCAGCCCTTAATGCTCCCCATGCACAG
CATGCTCCTTACCTTGGAATGGTTGTGCTGGGGCTATTCAAGCATTCATG
A
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