EY711306
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY711306 vs. ExPASy Swiss-Prot
Match: PABP_NEOFI (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=pab1 PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.907e-14 Identity = 62/231 (26.84%), Postives = 101/231 (43.72%), Query Frame = 1 Query: 1 ADAWAAIVTLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISEDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD-----KGFGFVRYSTHPEASLAIQMGNARILCGKPI 678 AD A+ LN I G+P ++ W+ T G NVF+ +L + + L F+ F +V D+ G S+G+GFV + E A +AI +NG L +++ V + + IS+ ++ E+ N +T VY+ N+ EVT + + F G I + RD +GFGFV +STH A A+ N + + G+ + Sbjct: 104 ADGERALEDLNYTLIKGKPCRIMWSQRDPALRKT-GQGNVFIKNLDAAIDNKALHDTFAAFGNILSCKVAQDE-FGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKK------------------------VFVGHHISKKDRQSKFEEMKAN---FTNVYIKNIDQEVTDEEFRKMFEKF--GEITSATLSRDQEGKSRGFGFVNFSTHDSAQAAVDEMNDKEIKGQKL 303
BLAST of EY711306 vs. ExPASy Swiss-Prot
Match: PABP_ASPFU (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Aspergillus fumigatus GN=pab1 PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.907e-14 Identity = 62/231 (26.84%), Postives = 101/231 (43.72%), Query Frame = 1 Query: 1 ADAWAAIVTLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISEDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD-----KGFGFVRYSTHPEASLAIQMGNARILCGKPI 678 AD A+ LN I G+P ++ W+ T G NVF+ +L + + L F+ F +V D+ G S+G+GFV + E A +AI +NG L +++ V + + IS+ ++ E+ N +T VY+ N+ EVT + + F G I + RD +GFGFV +STH A A+ N + + G+ + Sbjct: 104 ADGERALEDLNYTLIKGKPCRIMWSQRDPALRKT-GQGNVFIKNLDAAIDNKALHDTFAAFGNILSCKVAQDE-FGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKK------------------------VFVGHHISKKDRQSKFEEMKAN---FTNVYIKNIDQEVTDEEFRKMFEKF--GEITSATLSRDQEGKSRGFGFVNFSTHDSAQAAVDEMNDKEIKGQKL 303
BLAST of EY711306 vs. ExPASy Swiss-Prot
Match: PABP_ASPTN (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=pab1 PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 2.490e-14 Identity = 62/231 (26.84%), Postives = 101/231 (43.72%), Query Frame = 1 Query: 1 ADAWAAIVTLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISEDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD-----KGFGFVRYSTHPEASLAIQMGNARILCGKPI 678 AD A+ LN I G+P ++ W+ T G NVF+ +L + + L F+ F +V D+ G S+G+GFV + E A +AI +NG L +++ V + + IS+ ++ E+ N +T VY+ NL E++ + + F G I + RD +GFGFV YSTH A A+ N + + G+ + Sbjct: 100 ADGERALEDLNYTLIKGKPCRIMWSQRDPALRKT-GQGNVFIKNLDAAIDNKALHDTFAAFGNILSCKVAQDE-FGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKK------------------------VFVGHHISKKDRQSKFEEMKAN---FTNVYIKNLDQEISEEEFRQMFEKF--GEITSATLSRDQEGKSRGFGFVNYSTHDSAQAAVDEMNDKEVKGQKL 299
BLAST of EY711306 vs. ExPASy Swiss-Prot
Match: PABP5_ARATH (Polyadenylate-binding protein 5 OS=Arabidopsis thaliana GN=PAB5 PE=1 SV=2) HSP 1 Score: 79.337 bits (194), Expect = 3.252e-14 Identity = 64/221 (28.96%), Postives = 101/221 (45.70%), Query Frame = 1 Query: 4 DAWAAIVTLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISEDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD-----KGFGFVRYSTHPEASLAIQMGN 651 DA A+ +LN I +PI++ + SG NVF+ +L + + L+ FS F T +V D GRS+G+GFV F +E AQ+AI+ LNG L ++Q+ + ++ S+S +V P +T VYV NL E+T +L + F G I V +D + FGFV + + A++A++ N Sbjct: 97 DASRAMESLNYAPIRDRPIRIMLSNRDPSTR-LSGKGNVFIKNLDASIDNKALYETFSSFGTILSCKVAMDV-VGRSKGYGFVQFEKEETAQAAIDKLNGMLLNDKQVFVGHFVR----RQDRARSESGAV-----------------------PSFTNVYVKNLPKEITDDELKKTFGK--YGDISSAVVMKDQSGNSRSFGFVNFVSPEAAAVAVEKMN 286
BLAST of EY711306 vs. ExPASy Swiss-Prot
Match: PABP_CANGA (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Candida glabrata GN=PAB1 PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 4.247e-14 Identity = 66/234 (28.21%), Postives = 105/234 (44.87%), Query Frame = 1 Query: 7 AWAAIVTLNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISEDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCV--GTIEDVRVQR-----DKGFGFVRYSTHPEASLAIQMGNARILCGKPI 678 A AI LN I G+ ++ W SQR+ + G N+F+ +L P++ + L+ FSVF ++V D+ TG+S+GFG+V F E A AI+ LNG L ++I G + +S E E +T VY+ N+++E T + F L G + V ++R +KGFGFV + H +A ++ N G+P+ Sbjct: 89 AKTAIEKLNFTPIKGKLCRIMW----SQRDPSLRKKGAGNIFIKNLHPDIDNKALYDTFSVFGNILSSKVATDE-TGKSKGFGYVHFEEDESASEAIDALNGMLLNGQEIYV---------GPHLSKKERESKFE------------------EMKANFTNVYIKNINTETTD----KEFEELVAKFGKTDSVVLERTPEGENKGFGFVNFVNHEDAVKCVEELNNTEFKGQPL 286 HSP 2 Score: 72.4034 bits (176), Expect = 3.975e-12 Identity = 66/231 (28.57%), Postives = 101/231 (43.72%), Query Frame = 1 Query: 16 AIVTLNGRHIFGQPIKVNWAYASSQREDT-----SGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISEDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQ-----RDKGFGFVRYSTHPEASLAIQMGNARILCGKPI 678 AI LNG + GQ I V + +RE + NV++ +++ E TD + F +D+ V+ G ++GFGFV+F N EDA + +LN + + N A K ++ + K E T EK + Q +++ NL + L F GTI +V + KGFGFV +ST EA+ AI N +I+ GKP+ Sbjct: 179 AIDALNGMLLNGQEIYVGPHLSKKERESKFEEMKANFTNVYIKNINTETTDKEFEELVAKFGK-TDSVVLERTPEGENKGFGFVNFVNHEDAVKCVEELNNTEFKGQPLYVNRAQK-----KYERQQELKKQYEATR------MEKMAKY------QGINLFIKNLDDSIDDKKLEEEFAPY--GTITSAKVMTTENGKSKGFGFVCFSTPEEATKAITEKNQQIVAGKPL 389
BLAST of EY711306 vs. ExPASy Swiss-Prot
Match: PABP_SCHPO (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Schizosaccharomyces pombe GN=pab1 PE=1 SV=2) HSP 1 Score: 78.5666 bits (192), Expect = 5.547e-14 Identity = 64/232 (27.59%), Postives = 103/232 (44.40%), Query Frame = 1 Query: 13 AAIVTLNGRHIFGQPIKVNWAYASSQREDT-----SGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISEDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD-----KGFGFVRYSTHPEASLAIQMGNARILCGKPI 678 AAI +NG + + + V + +R+ + NV++ +L E+T+ F F + ++ DQ + RGFGFV++ N E AQ A+++LN K +++ A K +E + + +E N Q +++ NL EV L F A GTI ++ D KGFGFV Y+T EA+ A+ N R+L GKP+ Sbjct: 223 AAIEHVNGMLLNDKKVYVGHHVSRRERQSKVEALKANFTNVYIKNLDTEITEQEFSDLFGQFGEITSLSLVKDQND-KPRGFGFVNYANHECAQKAVDELNDKEYKGKKLYVGRAQKKHEREEELRKRYEQMKLEKMNKY-----------------QGVNLFIKNLQDEVDDERLKAEFSAF--GTITSAKIMTDEQGKSKGFGFVCYTTPEEANKAVTEMNQRMLAGKPL 434 HSP 2 Score: 73.559 bits (179), Expect = 1.784e-12 Identity = 66/231 (28.57%), Postives = 104/231 (45.02%), Query Frame = 1 Query: 4 DAWAAIVTLNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISEDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALC-VGTIEDVRVQRDK--GFGFVRYSTHPEASLAIQMGNARILCGKPI 678 D A+ LN I G+P ++ W SQR+ + G NVF+ +L P + + L FS F +V D+ G ++G+GFV F + E A +AI +NG L ++++ G + +S VE K+N +T VY+ NL +E+T + F + ++ V+ Q DK GFGFV Y+ H A A+ N + GK + Sbjct: 133 DGEKALDELNYTLIKGRPCRIMW----SQRDPSLRKMGTGNVFIKNLDPAIDNKALHDTFSAFGKILSCKVAVDE-LGNAKGYGFVHFDSVESANAAIEHVNGMLLNDKKVYV---------GHHVSRRERQSKVEAL---------KAN---------FTNVYIKNLDTEITEQEFSDLFGQFGEITSLSLVKDQNDKPRGFGFVNYANHECAQKAVDELNDKEYKGKKL 331
BLAST of EY711306 vs. ExPASy Swiss-Prot
Match: PABP_ASPNC (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=pab1 PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 5.547e-14 Identity = 61/222 (27.48%), Postives = 97/222 (43.69%), Query Frame = 1 Query: 1 ADAWAAIVTLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISEDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD-----KGFGFVRYSTHPEASLAIQMGN 651 AD A+ LN I G+P ++ W+ T G NVF+ +L + + L F+ F +V D+ G S+G+GFV + E A +AI +NG L +++ V + + IS+ ++ E+ N +T VY+ NL SE+ + + F G I + RD +GFGFV +STH A A++ N Sbjct: 106 ADGERALEDLNYTLIKGKPCRIMWSQRDPALRKT-GQGNVFIKNLDSAIDNKALHDTFAAFGNILSCKVAQDE-FGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKK------------------------VFVGHHISKKDRQSKFEEMKAN---FTNVYIKNLDSEIDDDEFRKMFEKF--GEITSATLSRDQEGKSRGFGFVNFSTHESAQAAVEEMN 296
BLAST of EY711306 vs. ExPASy Swiss-Prot
Match: PABP_CRYNE (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Cryptococcus neoformans GN=PAB1 PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 9.462e-14 Identity = 68/232 (29.31%), Postives = 106/232 (45.69%), Query Frame = 1 Query: 13 AAIVTLNGRHIFGQPIKVNWAYASSQR----EDTSGHF-NVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISEDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD-----KGFGFVRYSTHPEASLAIQMGNARILCGKPI 678 AAI +NG + + + V +R E+ F NV++ ++ EVTDA F + D+K G S+GFGFV++ N E A+ A+++LN K + +++ +A + T + + EL E E + A N +YV NL E L F A GTI +V RD +GFGFV YS+ EA+ A+ N +++ KP+ Sbjct: 189 AAIKAVNGMLLNDKKVYVGHHVGKKERLSKVEELRAQFTNVYIKNVDLEVTDAEFEDLVKPFGPTISVALSRDEK-GVSKGFGFVNYENHESARKAVDELNEKEVNGKKL---YAGRAQTKSERE--------AELKKSHEEKRLENEAKSAGVN------LYVKNLDDEWDDDRLRAEFEAF--GTITSSKVMRDDSGVSRGFGFVCYSSPDEATKAVSEMNGKMIGTKPL 400
BLAST of EY711306 vs. ExPASy Swiss-Prot
Match: ROC2_NICSY (29 kDa ribonucleoprotein B, chloroplastic OS=Nicotiana sylvestris PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 2.108e-13 Identity = 66/204 (32.35%), Postives = 89/204 (43.63%), Query Frame = 1 Query: 103 SGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWA---AKGATSGDEKQSSDSKSVVELTNGISEDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRV------QRDKGFGFVRYSTHPEASLAIQMGNARILCGKPIKCS 687 S +FVG+L V A L F V++D+ TGRSRGFGFV+ +E+ ++A NG + R IR N AK S + S +G S G + +N VYVGNLS V + L F G + D +V R +GFGFV YS+ E + AI N L G+ I+ S Sbjct: 84 SEDLKLFVGNLPFSVDSAALAGLFERAGNVEMVEVIYDKLTGRSRGFGFVTMSTKEEVEAAEQQFNGYEIDGRAIRVNAGPAPAKRENSSFGGGRGGNSSYGGGRDGNSSFGGARGGRSVDSSN----RVYVGNLSWGVDDLALKELFSE--QGNVVDAKVVYDRDSGRSRGFGFVTYSSSKEVNDAIDSLNGVDLDGRSIRVS 281
BLAST of EY711306 vs. ExPASy Swiss-Prot
Match: PABP_ASPOR (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Aspergillus oryzae GN=pab1 PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 2.108e-13 Identity = 60/224 (26.79%), Postives = 96/224 (42.86%), Query Frame = 1 Query: 1 ADAWAAIVTLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISEDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD-----KGFGFVRYSTHPEASLAIQMGNAR 657 AD A+ LN I G+P ++ W+ T G NVF+ +L + + L F+ F +V D+ G S+G+GFV + E A +AI +NG L +++ V + + IS+ ++ E+ N +T VY+ N+ +VT + F G I + RD +GFGFV +STH A A+ N + Sbjct: 101 ADGERALEDLNYTLIKGKPCRIMWSQRDPALRKT-GQGNVFIKNLDSAIDNKALHDTFAAFGNILSCKVAQDE-FGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKK------------------------VFVGHHISKKDRQSKFEEMKAN---FTNVYIKNIDQDVTEEEFRELFEKF--GEITSATLSRDQEGKSRGFGFVNFSTHESAQAAVDEMNEK 293 The following BLAST results are available for this feature:
BLAST of EY711306 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 77
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY711306 ID=EY711306; Name=EY711306; organism=Citrus sinensis; type=EST; length=901bpback to top |