EY711306
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY711306 vs. ExPASy Swiss-Prot
Match: PABP_CANAL (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Candida albicans GN=PAB1 PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.753e-13 Identity = 64/233 (27.47%), Postives = 104/233 (44.64%), Query Frame = 1 Query: 4 DAWAAIVTLNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISEDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD-----KGFGFVRYSTHPEASLAIQMGNARILCGKPI 678 D AI LN I G+P ++ W SQR+ + SG N+F+ +L P + + L FS F +V D+ G+S+ FGFV + E A++AI ++NG L +R+ V + IS+ +E E+ N +T +YV N+ + + F G I + +++D KGFGFV + H A A++ N + + G+ I Sbjct: 105 DGEKAIEELNYNPIEGRPCRIMW----SQRDPSARRSGDGNIFIKNLHPAIDNKALHDTFSAFGKILSCKVATDE-FGQSKCFGFVHYETAEAAEAAIENVNGMLLNDRE------------------------VFVGKHISKKDRESKFEEMKAN---FTNIYVKNIDLNYSEESFEKLFSPF--GKITSIYLEKDQDGKSKGFGFVNFEDHESAVKAVEELNDKEINGQKI 303 HSP 2 Score: 69.707 bits (169), Expect = 2.577e-11 Identity = 64/235 (27.23%), Postives = 104/235 (44.26%), Query Frame = 1 Query: 7 AWAAIVTLNGRHIFGQPIKVNWAYASSQREDT-----SGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDE-KQSSDSKSVVELTNGISEDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD-----KGFGFVRYSTHPEASLAIQMGNARILCGKPI 678 A AAI +NG + + + V + RE + N++V ++ ++ + FS F + + DQ G+S+GFGFV+F + E A A+ +LN K + ++I A K +E K+ ++ + +L Q ++V NL + S L F GTI +V D KGFGFV ++T EA+ AI N R++ GKP+ Sbjct: 193 AEAAIENVNGMLLNDREVFVGKHISKKDRESKFEEMKANFTNIYVKNIDLNYSEESFEKLFSPFGKITSIYLEKDQD-GKSKGFGFVNFEDHESAVKAVEELNDKEINGQKIYVGRAQKKRERLEELKKQYEAVRLEKLA------------------KYQGVNLFVKNLDDTIDSEKLEEEFKPF--GTITSAKVMVDEAGKSKGFGFVCFTTPEEATKAITEMNTRMINGKPL 406
BLAST of EY711306 vs. ExPASy Swiss-Prot
Match: PABP_ASPCL (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Aspergillus clavatus GN=pab1 PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.753e-13 Identity = 58/218 (26.61%), Postives = 95/218 (43.58%), Query Frame = 1 Query: 1 ADAWAAIVTLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISEDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD-----KGFGFVRYSTHPEASLAI 639 AD A+ LN I G+P ++ W+ T G NVF+ +L + + L F+ F +V D+ G S+G+GFV + E A +AI +NG L +++ V + + IS+ ++ ++ N +T +Y+ N+ +VT + + F G I + RD +GFGFV YSTH A A+ Sbjct: 103 ADGERALEDLNYTLIKGKPCRIMWSQRDPALRKT-GQGNVFIKNLDSAIDNKALHDTFAAFGNILSCKVAQDE-FGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKK------------------------VFVGHHISKKDRQSKFDEMKAN---FTNIYIKNIDPDVTEEEFRKIFEQF--GEITSATLSRDPEGKSRGFGFVNYSTHESAQAAV 289
BLAST of EY711306 vs. ExPASy Swiss-Prot
Match: PABP_KLULA (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Kluyveromyces lactis GN=PAB1 PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 3.596e-13 Identity = 62/222 (27.93%), Postives = 98/222 (44.14%), Query Frame = 1 Query: 16 AIVTLNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISEDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD-----KGFGFVRYSTHPEASLAIQMGNAR 657 AI LN I G+P ++ W S+R+ G N+F+ +L P + + L FS F +V D+ G SRGFGFV F+ + DA+ AI +NG + ++ + A D IS+ + K+N +T +YV N+ E T + + F G I +++D KGFGFV + H A+ A++ N + Sbjct: 107 AIQELNYAEINGRPCRIMW----SERDPAIRKKGSGNIFIKNLHPAIDNKALHETFSTFGEVLSCKVALDEN-GNSRGFGFVHFKEESDAKDAIEAVNGMLMNGLEV---YVAMHVPKKDR---------------ISKLEEAKAN---------FTNIYVKNIDVETTDEEFEQLFSQ--YGEIVSAALEKDAEGKPKGFGFVNFVDHNAAAKAVEELNGK 294 HSP 2 Score: 70.4774 bits (171), Expect = 1.511e-11 Identity = 65/237 (27.43%), Postives = 103/237 (43.46%), Query Frame = 1 Query: 1 ADAWAAIVTLNGRHIFGQPIKVNWAYASSQR----EDTSGHF-NVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDE-KQSSDSKSVVELTNGISEDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD-----KGFGFVRYSTHPEASLAIQMGNARILCGKPI 678 +DA AI +NG + G + V R E+ +F N++V ++ E TD FS + A + D + G+ +GFGFV+F + A A+ +LNGK ++ + A K +E K+ + + +L Q +++ NL + L F GTI RV RD KGFGFV +S+ EA+ A+ N +I+ GKP+ Sbjct: 189 SDAKDAIEAVNGMLMNGLEVYVAMHVPKKDRISKLEEAKANFTNIYVKNIDVETTDEEFEQLFSQYGEIVSAALEKDAE-GKPKGFGFVNFVDHNAAAKAVEELNGKEFKSQALYVGRAQKKYERAEELKKQYEQYRLEKLAKF------------------QGVNLFIKNLDDSIDDEKLKEEFAP--YGTITSARVMRDQEGNSKGFGFVCFSSPEEATKAMTEKNQQIVAGKPL 404
BLAST of EY711306 vs. ExPASy Swiss-Prot
Match: PABP_COCIM (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Coccidioides immitis GN=PAB1 PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 3.596e-13 Identity = 60/230 (26.09%), Postives = 98/230 (42.61%), Query Frame = 1 Query: 1 ADAWAAIVTLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISEDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSV---DLHRHFHALCVGTI-EDVRVQRDKGFGFVRYSTHPEASLAIQMGNARILCGKPI 678 AD A+ LN I G+P ++ W+ T G NVF+ +L + + L F+ F +V D+ G S+G+GFV + E AQ+AI +NG L ++++ G D +S E E +T VYV N+ + T DL F + T+ D + +GFGFV +++H A+ A++ N + G+ + Sbjct: 107 ADGERALEDLNYTLIKGRPCRIMWSQRDPALRKT-GQGNVFIKNLDTAIDNKALHDTFAAFGNILSCKVAQDE-FGNSKGYGFVHYETAEAAQNAIKHVNGMLLNDKKV---------FVGHHIAKKDRQSKFE------------------EMKANFTNVYVKNIDQDTTEEEFRDLFEKFGEITSATLARDAESGKSRGFGFVNFTSHDNAAAAVEALNDKDFKGQKL 307
BLAST of EY711306 vs. ExPASy Swiss-Prot
Match: PAB4L_HUMAN (Polyadenylate-binding protein 4-like OS=Homo sapiens GN=PABPC4L PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 6.133e-13 Identity = 68/231 (29.44%), Postives = 104/231 (45.02%), Query Frame = 1 Query: 1 ADAWAAIVTLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISEDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD-----KGFGFVRYSTHPEASLAIQMGNARILCGKPI 678 ADA A+ T+N I G+ I++ W+ + SG NVF+ +L + + TL+ FS F ++VM D + S+G+ FV F+NQ A AI ++NGK L ++ G K D ++ EL + SE +T VY+ N ++ L F G V+V D KGFGFV + +H A A++ N R + G+ I Sbjct: 62 ADAQKALDTMNFDIIKGKSIRLMWSQRDAYLR-RSGIGNVFIKNLDKSIDNKTLYEHFSAFGKILSSKVMSDDQG--SKGYAFVHFQNQSAADRAIEEMNGKLLKGCKV---------FVGRFKNRKDREA--ELRSKASE----------------FTNVYIKNFGGDMDDERLKDVFSK--YGKTLSVKVMTDSSGKSKGFGFVSFDSHEAAKKAVEEMNGRDINGQLI 260 HSP 2 Score: 68.5514 bits (166), Expect = 5.741e-11 Identity = 63/230 (27.39%), Postives = 105/230 (45.65%), Query Frame = 1 Query: 16 AIVTLNGRHIFGQPIKVNWAYASSQRE-----DTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISEDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD----KGFGFVRYSTHPEASLAIQMGNARILCGKPI 678 AI +NG+ + G + V RE S NV++ + ++ D L FS + +VM D +G+S+GFGFVSF + E A+ A+ ++NG+ + + I A K E+Q+ EL + +E+ Q +Y+ NL + L F + G+I V+V ++ KGFG + +S+ +A+ A+ N RIL KP+ Sbjct: 153 AIEEMNGKLLKGCKVFVGRFKNRKDREAELRSKASEFTNVYIKNFGGDMDDERLKDVFSKYGKTLSVKVMTDS-SGKSKGFGFVSFDSHEAAKKAVEEMNGRDINGQLIFVGRAQKKV----ERQA-------ELKQMFEQLKRERI------RGCQGVKLYIKNLDDTIDDEKLRNEFSSF--GSISRVKVMQEEGQSKGFGLICFSSPEDATKAMTEMNGRILGSKPL 362
BLAST of EY711306 vs. ExPASy Swiss-Prot
Match: ROC2_NICPL (31 kDa ribonucleoprotein, chloroplastic OS=Nicotiana plumbaginifolia PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 8.010e-13 Identity = 65/204 (31.86%), Postives = 89/204 (43.63%), Query Frame = 1 Query: 103 SGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWA---AKGATSGDEKQSSDSKSVVELTNGISEDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRV------QRDKGFGFVRYSTHPEASLAIQMGNARILCGKPIKCS 687 S +FVG+L V A L F V++D+ +GRSRGFGFV+ +E+ ++A NG + R IR N AK S + S +G S G + +N VYVGNLS V + L F G + D +V R +GFGFV YS+ E + AI N L G+ I+ S Sbjct: 85 SEDLKLFVGNLPFSVDSAALAGLFERAGNVEIVEVIYDKLSGRSRGFGFVTMSTKEEVEAAEQQFNGYEIDGRAIRVNAGPAPAKRENSSFGGGRGGNSSYGGGRDGNSSFGGARGGRSVDSSN----RVYVGNLSWGVDDLALKELFSE--QGNVVDAKVVYDRDSGRSRGFGFVTYSSAKEVNDAIDSLNGIDLDGRSIRVS 282
BLAST of EY711306 vs. ExPASy Swiss-Prot
Match: PABP_NEUCR (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Neurospora crassa GN=pab-1 PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 1.046e-12 Identity = 60/231 (25.97%), Postives = 96/231 (41.56%), Query Frame = 1 Query: 1 ADAWAAIVTLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISEDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD-----KGFGFVRYSTHPEASLAIQMGNARILCGKPI 678 AD A+ LN I G+P ++ W+ T G N+F+ +L + + L F+ F +V D+ G S+G+GFV + E A AI +NG L +++ G D +S E E +T VYV N+++EVT + F G + + RD +GFGFV ++TH A+ A+ N + G+ + Sbjct: 112 ADGEKALEELNYTLIKGRPCRIMWSQRDPALRKT-GAGNIFIKNLDAAIDNKALHDTFAAFGNILSCKVAQDEH-GNSKGYGFVHYETDEAASQAIKHVNGMLLNEKKVYV---------GHHIPKKDRQSKFE------------------EMKANFTNVYVKNINNEVTDEEFRELFAKF--GEVTSSSLARDQEGKSRGFGFVNFTTHEAAAQAVDELNGKDFRGQDL 311
BLAST of EY711306 vs. ExPASy Swiss-Prot
Match: PABP_MAGGR (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Magnaporthe grisea GN=PAB1 PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 1.046e-12 Identity = 58/228 (25.44%), Postives = 93/228 (40.79%), Query Frame = 1 Query: 1 ADAWAAIVTLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISEDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFH----ALCVGTIEDVRVQRDKGFGFVRYSTHPEASLAIQMGNARILCGK 672 AD A+ LN I G+P ++ W+ T G NVF+ +L + + L F+ F +V D+ G S+G+GFV + E A AI +NG L +++ G D +S + E +T +YV N++ EVT + F D + +GFGFV +++H +AS A+Q N + G+ Sbjct: 113 ADGEKALEELNYTLIKGRPCRIMWSQRDPALRKT-GQGNVFIKNLDVAIDNKALHDTFAAFGNILSCKVAQDEN-GNSKGYGFVHYETDEAASQAIKHVNGMLLNEKKVYV---------GHHIPKKDRQSKFD------------------EMKANFTNIYVKNINPEVTDDEFRTLFEKYGDVTSSSLARDQETGKSRGFGFVNFTSHEDASKAVQELNEKEFHGQ 311
BLAST of EY711306 vs. ExPASy Swiss-Prot
Match: PABP2_ARATH (Polyadenylate-binding protein 2 OS=Arabidopsis thaliana GN=PAB2 PE=1 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 1.046e-12 Identity = 65/232 (28.02%), Postives = 109/232 (46.98%), Query Frame = 1 Query: 7 AWAAIVTLNGRHIFGQPIKVNWAYASSQREDTSGHF---NVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISEDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD-----KGFGFVRYSTHPEASLAIQMGNARILCGKPI 678 A AI LNG + + + V +R+ T+ NV+V +L+ TD L F + + A VM D + G+S+GFGFV+F N +DA A+ LNG +++ W A E+++ EL ++ +E +++ Q + +YV NL ++ L F GT+ +V RD KG GFV ++T EA+ A+ + +++ KP+ Sbjct: 177 AQKAIEKLNGMLLNDKQVYVGPFLRRQERDSTANKTKFTNVYVKNLAESTTDDDLKNAFGEYGKITSAVVMKDGE-GKSKGFGFVNFENADDAARAVESLNGHKFDDKE----WYVGRAQKKSERET-------ELRVRYEQNLKEAADKF------QSSNLYVKNLDPSISDEKLKEIFSPF--GTVTSSKVMRDPNGTSKGSGFVAFATPEEATEAMSQLSGKMIESKPL 388
BLAST of EY711306 vs. ExPASy Swiss-Prot
Match: RRP2_SPIOL (30S ribosomal protein 2, chloroplastic OS=Spinacia oleracea GN=PSRP2 PE=1 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.366e-12 Identity = 62/208 (29.81%), Postives = 92/208 (44.23%), Query Frame = 1 Query: 82 SSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGD--EKQSSDSKSVVELTNGISEDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQR------DKGFGFVRYSTHPEASLAIQMGNARILCGKPIK 681 +S D G ++VG++ + + L A VM+D+ +GRSR FGFV+ + EDA + I LN +G R+I+ N K D Q+ DS+ V ++P VY+GNL+ VT+ L F G + +VQR GFGFV +S+ E AIQ N +L G+ I+ Sbjct: 74 ASSSSDGEGARRLYVGNIPRNLNNDELRTIVEEHGAIEIAEVMYDKYSGRSRRFGFVTMKTVEDANAVIEKLNDTEIGGRKIKVNITEKPLEGMDIATTQAEDSQFV-----------------ESPYK------VYIGNLAKTVTNELLKDFFSE--KGKVLGAKVQRTPGTSKSNGFGFVSFSSEEEVEAAIQALNNSVLEGQKIR 256 The following BLAST results are available for this feature:
BLAST of EY711306 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 77
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Sequences
The
following sequences are available for this feature:
EST sequence >EY711306 ID=EY711306; Name=EY711306; organism=Citrus sinensis; type=EST; length=901bpback to top |