EY711287
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY711287 vs. ExPASy Swiss-Prot
Match: ISPG_SYNJB (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Synechococcus sp. GN=ispG PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 5.080e-33 Identity = 66/114 (57.89%), Postives = 82/114 (71.93%), Query Frame = 2 Query: 11 AFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGRWAEPPA 352 A+ +LQ +R T EYV+CPSCGRTLF+L+E+ ++R T HL G+ IA+MGCIVNGPGEMADAD+GYVG PG I LY GK VKR + + ALI LIK GRW +PP+ Sbjct: 295 AYGILQALNLRKTMVEYVACPSCGRTLFNLEEVLQKVRAATQHLVGLDIAVMGCIVNGPGEMADADYGYVGKTPGVISLYRGKEEVKR-VPESEGVQALIDLIKADGRWVDPPS 407
BLAST of EY711287 vs. ExPASy Swiss-Prot
Match: ISPG_SYNJA (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Synechococcus sp. (strain JA-3-3Ab) GN=ispG PE=3 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 8.665e-33 Identity = 65/113 (57.52%), Postives = 82/113 (72.57%), Query Frame = 2 Query: 11 AFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGRWAEPP 349 A+ +LQ +R T EYV+CPSCGRTLF+L+E+ ++R T HL G+ IA+MGCIVNGPGEMADAD+GYVG PG I LY GK VK+ + + ALI+LIK GRW +PP Sbjct: 295 AYGILQALNLRKTMVEYVACPSCGRTLFNLEEVLQKVRAATQHLVGLDIAVMGCIVNGPGEMADADYGYVGKTPGYISLYRGKEEVKK-VPESEGVQALIELIKADGRWVDPP 406
BLAST of EY711287 vs. ExPASy Swiss-Prot
Match: ISPG_BACFR (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Bacteroides fragilis GN=ispG PE=3 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 8.665e-33 Identity = 66/113 (58.41%), Postives = 84/113 (74.34%), Query Frame = 2 Query: 5 ASAFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGRWAE 343 A+AF +LQ R+R +KTEY+SCP CGRTLF+LQ A ++E TSHL G+ I IMGCIVNGPGEMADAD+GYVG GKI LY K +++ I E+A + LI+LIK +G + E Sbjct: 500 ATAFGILQAGRIRTSKTEYISCPGCGRTLFNLQSTIARVKEATSHLKGLKIGIMGCIVNGPGEMADADYGYVGAGRGKISLYKQKECIEKNIPEEEAVEKLIELIKANGDYEE 612
BLAST of EY711287 vs. ExPASy Swiss-Prot
Match: ISPG_BACFN (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) GN=ispG PE=3 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 8.665e-33 Identity = 66/113 (58.41%), Postives = 84/113 (74.34%), Query Frame = 2 Query: 5 ASAFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGRWAE 343 A+AF +LQ R+R +KTEY+SCP CGRTLF+LQ A ++E TSHL G+ I IMGCIVNGPGEMADAD+GYVG GKI LY K +++ I E+A + LI+LIK +G + E Sbjct: 500 ATAFGILQAGRIRTSKTEYISCPGCGRTLFNLQSTIARVKEATSHLKGLKIGIMGCIVNGPGEMADADYGYVGAGRGKISLYKQKECIEKNIPEEEAVEKLIELIKANGDYEE 612
BLAST of EY711287 vs. ExPASy Swiss-Prot
Match: ISPG_SYNSC (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Synechococcus sp. (strain CC9605) GN=ispG PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 1.930e-32 Identity = 63/111 (56.76%), Postives = 84/111 (75.68%), Query Frame = 2 Query: 14 FNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGRWAEP 346 +++LQ +R T EYV+CPSCGRTLF+L+E+ ++R TSHL G+ IA+MGCIVNGPGEMADAD+GYVG PG I LY G+ +++ + + +ALIQLIK+ GRW EP Sbjct: 288 YSILQSLGLRKTMVEYVACPSCGRTLFNLEEVLHKVRNATSHLTGLDIAVMGCIVNGPGEMADADYGYVGKTPGVISLYRGRDEIRK-VPEAEGVEALIQLIKEDGRWVEP 397
BLAST of EY711287 vs. ExPASy Swiss-Prot
Match: ISPG_PROMP (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=ispG PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 5.616e-32 Identity = 64/111 (57.66%), Postives = 84/111 (75.68%), Query Frame = 2 Query: 14 FNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGRWAEP 346 +++LQ +R T EY+SCPSCGRTLF+L+E+ ++R+ TSHL G+ IAIMGCIVNGPGEMADAD+GYVG G I LY K +KR + ++ DALI+LIKD G+W +P Sbjct: 296 YSILQSLGLRKTMVEYISCPSCGRTLFNLEEVVDKVRKATSHLTGLDIAIMGCIVNGPGEMADADYGYVGKGKGTIALYRRKEEIKR-VPEDEGVDALIRLIKDDGKWIDP 405
BLAST of EY711287 vs. ExPASy Swiss-Prot
Match: ISPG_SYNP6 (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=ispG PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 7.335e-32 Identity = 64/111 (57.66%), Postives = 82/111 (73.87%), Query Frame = 2 Query: 14 FNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGRWAEP 346 +++LQ +R T EYV+CPSCGRTLF+L+E+ ++R T+HL G+ IA+MGCIVNGPGEMADAD+GYVG PG I LY G+ +KR + EQ + LI LIK GRW EP Sbjct: 294 YSILQALGLRKTMVEYVACPSCGRTLFNLEEVLHKVRAATNHLVGLDIAVMGCIVNGPGEMADADYGYVGKTPGTIALYRGRDEIKR-VPEEQGVEELINLIKADGRWVEP 403
BLAST of EY711287 vs. ExPASy Swiss-Prot
Match: ISPG_SYNP2 (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=ispG PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 7.335e-32 Identity = 62/112 (55.36%), Postives = 83/112 (74.11%), Query Frame = 2 Query: 14 FNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGRWAEPP 349 +++LQ +R T EYV+CPSCGRTLF+L+E+ ++RE T+HL G+ IA+MGCIVNGPGEMADAD+GYVG PG I LY G+ +++ + Q + LI LIK GRW +PP Sbjct: 295 YSILQALGLRKTMVEYVACPSCGRTLFNLEEVLHKVREATNHLTGLDIAVMGCIVNGPGEMADADYGYVGKTPGVISLYRGREEIRK-VPEAQGVEELINLIKADGRWVDPP 405
BLAST of EY711287 vs. ExPASy Swiss-Prot
Match: ISPG_SYNE7 (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Synechococcus elongatus (strain PCC 7942) GN=ispG PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 7.335e-32 Identity = 64/111 (57.66%), Postives = 82/111 (73.87%), Query Frame = 2 Query: 14 FNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGRWAEP 346 +++LQ +R T EYV+CPSCGRTLF+L+E+ ++R T+HL G+ IA+MGCIVNGPGEMADAD+GYVG PG I LY G+ +KR + EQ + LI LIK GRW EP Sbjct: 294 YSILQALGLRKTMVEYVACPSCGRTLFNLEEVLHKVRAATNHLVGLDIAVMGCIVNGPGEMADADYGYVGKTPGTIALYRGRDEIKR-VPEEQGVEELINLIKADGRWVEP 403
BLAST of EY711287 vs. ExPASy Swiss-Prot
Match: ISPG_SYNS3 (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Synechococcus sp. (strain CC9311) GN=ispG PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 9.580e-32 Identity = 62/111 (55.86%), Postives = 82/111 (73.87%), Query Frame = 2 Query: 14 FNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGRWAEP 346 F++LQ +R T EYV+CPSCGRTLF+L+E+ ++R T HL G+ IA+MGCIVNGPGEMADAD+GYVG PG I LY + +++ + + +AL+QLIKD GRW EP Sbjct: 288 FSILQALGIRKTMVEYVACPSCGRTLFNLEEVLHQVRNATCHLTGLDIAVMGCIVNGPGEMADADYGYVGKGPGVIALYRNRDEIRK-VPESEGVEALVQLIKDDGRWVEP 397 The following BLAST results are available for this feature:
BLAST of EY711287 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 74
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Sequences
The
following sequences are available for this feature:
EST sequence >EY711287 ID=EY711287; Name=EY711287; organism=Citrus sinensis; type=EST; length=743bpback to top |