EY711287
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY711287 vs. ExPASy Swiss-Prot
Match: ISPG_NOSP7 (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=ispG PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.383e-30 Identity = 61/111 (54.95%), Postives = 81/111 (72.97%), Query Frame = 2 Query: 14 FNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGRWAEP 346 +++LQ +R T EYV+CPSCGRTLF+L+E+ ++RE T HL G+ IA+MGCIVNGPGEMADAD+GYVG PG I LY G+ +K+ + ++ + LI LIK RW EP Sbjct: 299 YSILQALGLRKTMVEYVACPSCGRTLFNLEEVLHKVREATKHLTGLDIAVMGCIVNGPGEMADADYGYVGKTPGYISLYRGREEIKK-VPEDKGVEELINLIKADERWVEP 408
BLAST of EY711287 vs. ExPASy Swiss-Prot
Match: ISPG_CYAP7 (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Cyanothece sp. (strain PCC 7424) GN=ispG PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.383e-30 Identity = 61/111 (54.95%), Postives = 81/111 (72.97%), Query Frame = 2 Query: 14 FNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGRWAEP 346 +++LQ +R T EYV+CPSCGRTLF+L+E+ ++RE T HL G+ IA+MGCIVNGPGEMADAD+GYVG G I LY G+ +K+ + +Q + LI LIK GRW +P Sbjct: 297 YSILQALGLRKTMVEYVACPSCGRTLFNLEEVLHKVREATKHLTGLDIAVMGCIVNGPGEMADADYGYVGKQAGYISLYRGREEIKK-VPEDQGVEELINLIKADGRWVDP 406
BLAST of EY711287 vs. ExPASy Swiss-Prot
Match: ISPG_TRIEI (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Trichodesmium erythraeum (strain IMS101) GN=ispG PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.807e-30 Identity = 62/111 (55.86%), Postives = 79/111 (71.17%), Query Frame = 2 Query: 14 FNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGRWAEP 346 +++LQ +R T EYV+CPSCGRTLF+L+ + E+RE T HL G+ IA+MGCIVNGPGEMADAD+GYVG G I LY G+ +K+ + Q + LI LIK GRW EP Sbjct: 297 YSILQALGLRKTMVEYVACPSCGRTLFNLENVLHEVREATKHLTGLDIAVMGCIVNGPGEMADADYGYVGKQSGYISLYRGREEIKK-VHESQGVEELINLIKADGRWVEP 406
BLAST of EY711287 vs. ExPASy Swiss-Prot
Match: ISPG_CYAA5 (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Cyanothece sp. (strain ATCC 51142) GN=ispG PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.807e-30 Identity = 61/111 (54.95%), Postives = 81/111 (72.97%), Query Frame = 2 Query: 14 FNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGRWAEP 346 +++LQ +R T EYV+CPSCGRTLF+L+E+ ++RE T HL G+ IA+MGCIVNGPGEMADAD+GYVG G I LY G+ +K+ + +Q + LI LIK GRW +P Sbjct: 295 YSILQALGLRKTMVEYVACPSCGRTLFNLEEVLHKVREATKHLTGLDIAVMGCIVNGPGEMADADYGYVGKQAGYISLYRGREEIKK-VPEDQGVEELINLIKADGRWIDP 404
BLAST of EY711287 vs. ExPASy Swiss-Prot
Match: ISPG_SYNS9 (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Synechococcus sp. (strain CC9902) GN=ispG PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 5.257e-30 Identity = 58/111 (52.25%), Postives = 83/111 (74.77%), Query Frame = 2 Query: 14 FNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGRWAEP 346 +++LQ +R T EY++CPSCGRTLF+L+++ ++R TSHL G+ IA+MGCIVNGPGEMADAD+GYVG PG I LY G+ +++ + ++ ALIQLI++ G W +P Sbjct: 288 YSILQSLGLRKTMVEYIACPSCGRTLFNLEDVLHKVRNATSHLKGLDIAVMGCIVNGPGEMADADYGYVGKGPGIIALYRGREEIRK-VPEKEGVQALIQLIQEDGLWVDP 397
BLAST of EY711287 vs. ExPASy Swiss-Prot
Match: ISPG_SYNY3 (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Synechocystis sp. (strain PCC 6803) GN=ispG PE=3 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 1.171e-29 Identity = 61/111 (54.95%), Postives = 78/111 (70.27%), Query Frame = 2 Query: 14 FNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGRWAEP 346 +++LQ +R T EYV+CPSCGRTLF+L+++ E+RE T HL G+ IA+MGCIVNGPGEMADAD+GYVG G I LY G+ +KR + LI LIK GRW +P Sbjct: 294 YSILQALGLRKTMVEYVACPSCGRTLFNLEDVLHEVREATKHLTGLDIAVMGCIVNGPGEMADADYGYVGKQAGYIALYRGREEIKR-VPETDGVQELINLIKADGRWVDP 403
BLAST of EY711287 vs. ExPASy Swiss-Prot
Match: ISPG_MICAN (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Microcystis aeruginosa (strain NIES-843) GN=ispG PE=3 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 1.171e-29 Identity = 60/111 (54.05%), Postives = 78/111 (70.27%), Query Frame = 2 Query: 14 FNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGRWAEP 346 +++LQ +R T EYV+CPSCGRTLF+L+++ ++R T HL G+ IA+MGCIVNGPGEMADAD+GYVG G I LY G+ +KR + + LI LIK GRW EP Sbjct: 297 YSILQALGLRKTMVEYVACPSCGRTLFNLEDVLQQVRAATQHLTGLDIAVMGCIVNGPGEMADADYGYVGKQAGYISLYRGREEIKR-VPESEGVSELINLIKADGRWVEP 406
BLAST of EY711287 vs. ExPASy Swiss-Prot
Match: ISPG_SYMTH (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Symbiobacterium thermophilum GN=ispG PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.471e-13 Identity = 38/104 (36.54%), Postives = 63/104 (60.58%), Query Frame = 2 Query: 14 FNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLP-GVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIK 322 + +L+ +R +SCPSCGR DL +++ E+ + H+ +++A+MGC+VNGPGE A+AD GG G LYVG V++ E+ +AL++L++ Sbjct: 247 YEILKALGLRTRGINIISCPSCGRVQIDLVKVANEVERRLQHIDVPLNVAVMGCVVNGPGEAAEADVALFGG-KGVGMLYVGGERVRK-TTEEEMVEALVELVE 348
BLAST of EY711287 vs. ExPASy Swiss-Prot
Match: ISPG_KOCRD (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Kocuria rhizophila (strain ATCC 9341 / DSM 348 / NBRC 103217 / DC2201) GN=ispG PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 9.960e-13 Identity = 39/98 (39.80%), Postives = 59/98 (60.20%), Query Frame = 2 Query: 20 LLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLP-GVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALI 310 +LQ +R K E VSCPSCGR D+ +++ E+ E +HL + +A+MGC+VNGPGE +AD G G GK ++V V+K + +Q + L+ Sbjct: 265 ILQSLGLRPRKLEIVSCPSCGRAQVDVYKLAEEVNEGLAHLTVPLRVAVMGCVVNGPGEAREADLGVASG-NGKGQIFVRGEVIKT-VPEDQIVETLL 360
BLAST of EY711287 vs. ExPASy Swiss-Prot
Match: ISPG_THETN (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Thermoanaerobacter tengcongensis GN=ispG PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.219e-12 Identity = 35/105 (33.33%), Postives = 61/105 (58.10%), Query Frame = 2 Query: 20 LLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGK--TVVKRGIAMEQATDALIQLIKD 325 +L+ + E +SCP+CGRT D+ +++ E+ +TSH+ + +A+MGC+VNGPGE +AD G GG + GK +VK +E+ + +++K+ Sbjct: 250 ILRALGLLKEGVEVISCPTCGRTKIDVIKLATEVERRTSHIKKPLKVAVMGCVVNGPGEAKEADIGIAGGDREGVIFKKGKIYKIVKEEHLLEELLKEIEKMVKE 354 The following BLAST results are available for this feature:
BLAST of EY711287 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 74
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Sequences
The
following sequences are available for this feature:
EST sequence >EY711287 ID=EY711287; Name=EY711287; organism=Citrus sinensis; type=EST; length=743bpback to top |