EY711287
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY711287 vs. ExPASy Swiss-Prot
Match: ISPG_RENSM (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Renibacterium salmoninarum (strain ATCC 33209 / DSM 20767 / IFO 15589) GN=ispG PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.453e-11 Identity = 41/102 (40.20%), Postives = 58/102 (56.86%), Query Frame = 2 Query: 20 LLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSI----AIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQ 313 +LQ +R K E VSCPSCGR D+ ++ E+ T+ L G+ I A+MGC+VNGPGE +AD G G GK ++V V+K + Q + LI+ Sbjct: 265 ILQSLNLRPRKLEIVSCPSCGRAQVDVYTLAEEV---TAGLEGMEIPLRVAVMGCVVNGPGEAREADLGVASG-NGKGQIFVKGEVIKT-VPESQIVETLIE 361
BLAST of EY711287 vs. ExPASy Swiss-Prot
Match: ISPG_LEIXX (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Leifsonia xyli subsp. xyli GN=ispG PE=3 SV=2) HSP 1 Score: 69.3218 bits (168), Expect = 2.453e-11 Identity = 37/88 (42.05%), Postives = 53/88 (60.23%), Query Frame = 2 Query: 20 LLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSI----AIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVK 271 +LQ +R K E VSCPSCGR D+ +++ ++ TS G+S+ A+MGC+VNGPGE +AD G G GK ++V V+K Sbjct: 257 ILQSLNLRERKLEIVSCPSCGRAQVDVYKLAEDV---TSGFEGMSVPLRVAVMGCVVNGPGEAREADLGVASG-NGKGQIFVKGEVIK 340
BLAST of EY711287 vs. ExPASy Swiss-Prot
Match: ISPG_SACD2 (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=ispG PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.204e-11 Identity = 38/123 (30.89%), Postives = 68/123 (55.28%), Query Frame = 2 Query: 14 FNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGRWAEPPAEE*DMVISI 379 +++L+ ++R+ +++CPSC R FD+ + E+ + + + +A++GC+VNGPGE + D G GG P + +YV V + E D+L QLI+ AE A+E D++ + Sbjct: 252 WDILKSLKLRSKGINFIACPSCSRQNFDVIKTMNELEMRLEDITTPLDVAVIGCVVNGPGEAKEVDVGLAGGTPKNL-VYV-NGVPSQKFEQENLVDSLEQLIRKQA--AEKEAKEKDIIAKV 370
BLAST of EY711287 vs. ExPASy Swiss-Prot
Match: ISPG_GRABC (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) GN=ispG PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.204e-11 Identity = 36/106 (33.96%), Postives = 63/106 (59.43%), Query Frame = 2 Query: 14 FNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLY-VGKTVVKRGIAMEQATDALIQLIKD 325 + +L+G +R+ + +SCPSC R F++ E A + E+ +H+ ++++I+GC+VNGPGE D G GG G+ +Y GKT IA + D ++ L+++ Sbjct: 254 WEILKGLGLRHRGVKIISCPSCARQGFNVIETVAALEERLAHIQTPLTLSIIGCVVNGPGEALMTDIGLTGGGGGRHMIYNAGKT--DHTIAADGMVDHIVTLVEE 357
BLAST of EY711287 vs. ExPASy Swiss-Prot
Match: ISPG_SALAI (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Salinispora arenicola (strain CNS-205) GN=ispG PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.185e-11 Identity = 42/116 (36.21%), Postives = 63/116 (54.31%), Query Frame = 2 Query: 20 LLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLP-GVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVK---RGIAMEQATDALIQLIKDHGRWAEPPAE 355 +L+ +R E VSCPSCGR D+ +++ E+ LP + +A+MGC+VNGPGE +AD G G GK ++V V+K G +E + ++L + G AE P E Sbjct: 265 ILESLGLRERGLEIVSCPSCGRAQVDVYKLAEEVTAGLEGLPVPLRVAVMGCVVNGPGEAREADLGVASG-NGKGQIFVKGKVIKTVPEGQIVETLIEEALRLADEMG--AELPDE 377
BLAST of EY711287 vs. ExPASy Swiss-Prot
Match: ISPG_RHOOB (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Rhodococcus opacus (strain B4) GN=ispG PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.185e-11 Identity = 41/102 (40.20%), Postives = 58/102 (56.86%), Query Frame = 2 Query: 20 LLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSI----AIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQ 313 +LQ +R K E VSCPSCGR D+ ++ E+ T+ L G+ I A+MGC+VNGPGE +AD G G GK ++V V+K + Q + LI+ Sbjct: 266 ILQSLNLRPRKLEIVSCPSCGRAQVDVYTLADEV---TAGLEGMEIPLRVAVMGCVVNGPGEAREADLGVASG-NGKGQIFVKGKVIKT-VPEAQIVETLIE 362
BLAST of EY711287 vs. ExPASy Swiss-Prot
Match: ISPG_NOCFA (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Nocardia farcinica GN=ispG PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.185e-11 Identity = 40/102 (39.22%), Postives = 58/102 (56.86%), Query Frame = 2 Query: 20 LLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSI----AIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQ 313 +LQ +R K E VSCPSCGR D+ ++ E+ T+ L G+ + A+MGC+VNGPGE +AD G G GK ++V V+K + Q + LI+ Sbjct: 266 ILQSLNLRPRKLEIVSCPSCGRAQVDVYTLANEV---TAGLEGMEVPLRVAVMGCVVNGPGEAREADLGVASG-NGKGQIFVKGQVIKT-VPEHQIVETLIE 362
BLAST of EY711287 vs. ExPASy Swiss-Prot
Match: ISPG_MARMS (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Marinomonas sp. (strain MWYL1) GN=ispG PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.185e-11 Identity = 29/83 (34.94%), Postives = 51/83 (61.45%), Query Frame = 2 Query: 14 FNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLP-GVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGK 259 +++L+ ++RN +++CPSC R FD+ + E+ E+ + + +A++GC+VNGPGE +AD G GG+P + GK Sbjct: 252 WDMLRSLKLRNRGINFIACPSCSRQNFDVIKTMNELEERLDDITIPMDVAVIGCVVNGPGEAKEADIGLAGGSPNNLIYQDGK 334
BLAST of EY711287 vs. ExPASy Swiss-Prot
Match: ISPG_CLAMS (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Clavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / JCM 9667) GN=ispG PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.185e-11 Identity = 33/85 (38.82%), Postives = 51/85 (60.00%), Query Frame = 2 Query: 20 LLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHL-PGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVK 271 +LQ +R K E VSCPSCGR D+ ++ ++ E H+ + +A+MGC+VNGPGE +A+ G G G+ ++V V+K Sbjct: 264 ILQSLNLRERKLEIVSCPSCGRAQVDVYSLAEQVTEGLKHVNVPLRVAVMGCVVNGPGEAREAELGVASG-NGRGQIFVKGEVIK 347
BLAST of EY711287 vs. ExPASy Swiss-Prot
Match: ISPG_CLAM3 (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382) GN=ispG PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.185e-11 Identity = 33/85 (38.82%), Postives = 51/85 (60.00%), Query Frame = 2 Query: 20 LLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHL-PGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVK 271 +LQ +R K E VSCPSCGR D+ ++ ++ E H+ + +A+MGC+VNGPGE +A+ G G G+ ++V V+K Sbjct: 264 ILQSLNLRERKLEIVSCPSCGRAQVDVYSLAEQVTEGLKHVNVPLRVAVMGCVVNGPGEAREAELGVASG-NGRGQIFVKGEVIK 347 The following BLAST results are available for this feature:
BLAST of EY711287 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 74
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Sequences
The
following sequences are available for this feature:
EST sequence >EY711287 ID=EY711287; Name=EY711287; organism=Citrus sinensis; type=EST; length=743bpback to top |