EY711287
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY711287 vs. ExPASy Swiss-Prot
Match: ISPG_BIFLO (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Bifidobacterium longum GN=ispG PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.185e-11 Identity = 36/103 (34.95%), Postives = 59/103 (57.28%), Query Frame = 2 Query: 20 LLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKD 325 LL+ +R K + +SCPSCGR D+ ++++ + E + + +A+MGCIVNGPGE +AD G G GK +++ V+K + +Q D L+ + D Sbjct: 275 LLEYMGLRPRKFDIISCPSCGRAQVDVIQLASAVTEGLKDVTAPIRVAVMGCIVNGPGEAREADLGVASG-NGKGQIFIKGKVIKT-VPEDQIVDTLLTIAND 375
BLAST of EY711287 vs. ExPASy Swiss-Prot
Match: ISPG_ARTCA (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Arthrobacter chlorophenolicus (strain A6 / ATCC 700700 / DSM 12829 / JCM 12360) GN=ispG PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.465e-11 Identity = 40/102 (39.22%), Postives = 58/102 (56.86%), Query Frame = 2 Query: 20 LLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSI----AIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQ 313 +LQ +R K E VSCPSCGR D+ ++ ++ T+ L G+ I A+MGC+VNGPGE +AD G G GK ++V V+K + Q + LI+ Sbjct: 265 ILQSLNLRPRKLEIVSCPSCGRAQVDVYTLAEQV---TAGLEGMEIPLRVAVMGCVVNGPGEAREADLGVASG-NGKGQIFVKGEVIKT-VPESQIVETLIE 361
BLAST of EY711287 vs. ExPASy Swiss-Prot
Match: ISPG_MYCGA (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Mycoplasma gallisepticum GN=ispG PE=3 SV=2) HSP 1 Score: 67.3958 bits (163), Expect = 9.322e-11 Identity = 39/105 (37.14%), Postives = 57/105 (54.29%), Query Frame = 2 Query: 11 AFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIRE--KTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLI 319 A +L + + V+CP+CGR FDL +++ EI E K H P + ++I+GC VNGPGE +AD G GG + + K VV + + E D L Q+I Sbjct: 245 AKKMLNSLGLYENLVDVVACPTCGRLNFDLFKVTKEIEEFVKDLHFP-LKVSILGCSVNGPGEAKEADIGIAGGK--QEGIIFKKGVVVKSVKQEYLVDELKQMI 346
BLAST of EY711287 vs. ExPASy Swiss-Prot
Match: ISPG_AZOVD (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Azotobacter vinelandii (strain DJ / ATCC BAA-1303) GN=ispG PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 9.322e-11 Identity = 35/104 (33.65%), Postives = 56/104 (53.85%), Query Frame = 2 Query: 14 FNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHL-PGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIK 322 F++L+ +R+ +++CPSC R FD+ + E+ + L + +A++GC+VNGPGE +A G GG P + GK K G E D L +LI+ Sbjct: 252 FDILKSLHLRSRGINFIACPSCSRQNFDVVKTMNELETRLEDLLVPLDVAVIGCVVNGPGEAKEAHVGLTGGTPNNLVYIDGKPAQKLG--NENLVDELERLIR 353 The following BLAST results are available for this feature:
BLAST of EY711287 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 74
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Sequences
The
following sequences are available for this feature:
EST sequence >EY711287 ID=EY711287; Name=EY711287; organism=Citrus sinensis; type=EST; length=743bpback to top |