EY711285

Overview
NameEY711285
Unique NameEY711285
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length862
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY711285 vs. ExPASy Swiss-Prot
Match: PSBK_DRIGR (Photosystem II reaction center protein K OS=Drimys granadensis GN=psbK PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 3.541e-23
Identity = 54/61 (88.52%), Postives = 56/61 (91.80%), Query Frame = 3 
Query:  168 MLNIFSLMYICLNSALYSSSFLFAKLPEAYAFLNPIVDVMPVIPVLFFLLAFVWQAAVSFR 350
            MLNIFSL+ ICLNSAL+SSSF FAKLPEAYAF NPIVD MPVIPVLFFLLA VWQAAVSFR
Sbjct:    1 MLNIFSLICICLNSALHSSSFFFAKLPEAYAFFNPIVDFMPVIPVLFFLLALVWQAAVSFR 61
[Close]
BLAST of EY711285 vs. ExPASy Swiss-Prot
Match: PSBK_DAUCA (Photosystem II reaction center protein K OS=Daucus carota GN=psbK PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 3.541e-23
Identity = 53/61 (86.89%), Postives = 56/61 (91.80%), Query Frame = 3 
Query:  168 MLNIFSLMYICLNSALYSSSFLFAKLPEAYAFLNPIVDVMPVIPVLFFLLAFVWQAAVSFR 350
            MLNIFSL+ ICLNSA YSSS  FAKLPEAYAFLNPIVD+MPVIP+ FFLLAFVWQAAVSFR
Sbjct:    1 MLNIFSLICICLNSAFYSSSLFFAKLPEAYAFLNPIVDLMPVIPLFFFLLAFVWQAAVSFR 61
[Close]
BLAST of EY711285 vs. ExPASy Swiss-Prot
Match: PSBK_SOLTU (Photosystem II reaction center protein K OS=Solanum tuberosum GN=psbK PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 6.040e-23
Identity = 52/61 (85.25%), Postives = 55/61 (90.16%), Query Frame = 3 
Query:  168 MLNIFSLMYICLNSALYSSSFLFAKLPEAYAFLNPIVDVMPVIPVLFFLLAFVWQAAVSFR 350
            MLN FSL+ ICLNS LYSSSF F KLPEAYAFLNPIVD+MPVIP+ FFLLAFVWQAAVSFR
Sbjct:    1 MLNTFSLIGICLNSTLYSSSFFFGKLPEAYAFLNPIVDIMPVIPLFFFLLAFVWQAAVSFR 61
[Close]
BLAST of EY711285 vs. ExPASy Swiss-Prot
Match: PSBK_SOLLC (Photosystem II reaction center protein K OS=Solanum lycopersicum GN=psbK PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 6.040e-23
Identity = 52/61 (85.25%), Postives = 55/61 (90.16%), Query Frame = 3 
Query:  168 MLNIFSLMYICLNSALYSSSFLFAKLPEAYAFLNPIVDVMPVIPVLFFLLAFVWQAAVSFR 350
            MLN FSL+ ICLNS LYSSSF F KLPEAYAFLNPIVD+MPVIP+ FFLLAFVWQAAVSFR
Sbjct:    1 MLNTFSLIGICLNSTLYSSSFFFGKLPEAYAFLNPIVDIMPVIPLFFFLLAFVWQAAVSFR 61
[Close]
BLAST of EY711285 vs. ExPASy Swiss-Prot
Match: PSBK_SOLBU (Photosystem II reaction center protein K OS=Solanum bulbocastanum GN=psbK PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 6.040e-23
Identity = 52/61 (85.25%), Postives = 55/61 (90.16%), Query Frame = 3 
Query:  168 MLNIFSLMYICLNSALYSSSFLFAKLPEAYAFLNPIVDVMPVIPVLFFLLAFVWQAAVSFR 350
            MLN FSL+ ICLNS LYSSSF F KLPEAYAFLNPIVD+MPVIP+ FFLLAFVWQAAVSFR
Sbjct:    1 MLNTFSLIGICLNSTLYSSSFFFGKLPEAYAFLNPIVDIMPVIPLFFFLLAFVWQAAVSFR 61
[Close]
BLAST of EY711285 vs. ExPASy Swiss-Prot
Match: PSBK_ATRBE (Photosystem II reaction center protein K OS=Atropa belladonna GN=psbK PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 6.040e-23
Identity = 52/61 (85.25%), Postives = 55/61 (90.16%), Query Frame = 3 
Query:  168 MLNIFSLMYICLNSALYSSSFLFAKLPEAYAFLNPIVDVMPVIPVLFFLLAFVWQAAVSFR 350
            MLN FSL+ ICLNS LYSSSF F KLPEAYAFLNPIVD+MPVIP+ FFLLAFVWQAAVSFR
Sbjct:    1 MLNTFSLIGICLNSTLYSSSFFFGKLPEAYAFLNPIVDIMPVIPLFFFLLAFVWQAAVSFR 61
[Close]
BLAST of EY711285 vs. ExPASy Swiss-Prot
Match: PSBK_EUCGG (Photosystem II reaction center protein K OS=Eucalyptus globulus subsp. globulus GN=psbK PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 7.889e-23
Identity = 53/61 (86.89%), Postives = 56/61 (91.80%), Query Frame = 3 
Query:  168 MLNIFSLMYICLNSALYSSSFLFAKLPEAYAFLNPIVDVMPVIPVLFFLLAFVWQAAVSFR 350
            MLNIFSL+ ICL+S LYSSSF  AKLPEAYAFLNPIVD MPVIP+LFFLLAFVWQAAVSFR
Sbjct:    1 MLNIFSLICICLHSTLYSSSFFLAKLPEAYAFLNPIVDFMPVIPLLFFLLAFVWQAAVSFR 61
[Close]
BLAST of EY711285 vs. ExPASy Swiss-Prot
Match: PSBK_TOBAC (Photosystem II reaction center protein K OS=Nicotiana tabacum GN=psbK PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.757e-22
Identity = 51/61 (83.61%), Postives = 55/61 (90.16%), Query Frame = 3 
Query:  168 MLNIFSLMYICLNSALYSSSFLFAKLPEAYAFLNPIVDVMPVIPVLFFLLAFVWQAAVSFR 350
            MLN FSL+ ICLNS L+SSSF F KLPEAYAFLNPIVD+MPVIP+ FFLLAFVWQAAVSFR
Sbjct:    1 MLNTFSLIGICLNSTLFSSSFFFGKLPEAYAFLNPIVDIMPVIPLFFFLLAFVWQAAVSFR 61
[Close]
BLAST of EY711285 vs. ExPASy Swiss-Prot
Match: PSBK_SOYBN (Photosystem II reaction center protein K OS=Glycine max GN=psbK PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.757e-22
Identity = 51/61 (83.61%), Postives = 57/61 (93.44%), Query Frame = 3 
Query:  168 MLNIFSLMYICLNSALYSSSFLFAKLPEAYAFLNPIVDVMPVIPVLFFLLAFVWQAAVSFR 350
            MLNIF+L+ IC++S LYSSSF  AKLPEAYAFLNPIVD+MPVIP+LFFLLAFVWQAAVSFR
Sbjct:    1 MLNIFNLVCICIHSVLYSSSFFSAKLPEAYAFLNPIVDIMPVIPLLFFLLAFVWQAAVSFR 61
[Close]
BLAST of EY711285 vs. ExPASy Swiss-Prot
Match: PSBK_POPAL (Photosystem II reaction center protein K OS=Populus alba GN=psbK PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.757e-22
Identity = 52/61 (85.25%), Postives = 55/61 (90.16%), Query Frame = 3 
Query:  168 MLNIFSLMYICLNSALYSSSFLFAKLPEAYAFLNPIVDVMPVIPVLFFLLAFVWQAAVSFR 350
            MLNI +L+ ICLN ALYSSSF F KLPEAYAFLNPIVDVMPVIP+ FFLLAFVWQAAVSFR
Sbjct:    1 MLNILNLICICLNFALYSSSFFFTKLPEAYAFLNPIVDVMPVIPLFFFLLAFVWQAAVSFR 61
The following BLAST results are available for this feature:
BLAST of EY711285 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 69
Match NameE-valueIdentityDescription
PSBK_DRIGR3.541e-2388.52Photosystem II reaction center protein K OS=Drimys... [more]
PSBK_DAUCA3.541e-2386.89Photosystem II reaction center protein K OS=Daucus... [more]
PSBK_SOLTU6.040e-2385.25Photosystem II reaction center protein K OS=Solanu... [more]
PSBK_SOLLC6.040e-2385.25Photosystem II reaction center protein K OS=Solanu... [more]
PSBK_SOLBU6.040e-2385.25Photosystem II reaction center protein K OS=Solanu... [more]
PSBK_ATRBE6.040e-2385.25Photosystem II reaction center protein K OS=Atropa... [more]
PSBK_EUCGG7.889e-2386.89Photosystem II reaction center protein K OS=Eucaly... [more]
PSBK_TOBAC1.757e-2283.61Photosystem II reaction center protein K OS=Nicoti... [more]
PSBK_SOYBN1.757e-2283.61Photosystem II reaction center protein K OS=Glycin... [more]
PSBK_POPAL1.757e-2285.25Photosystem II reaction center protein K OS=Populu... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-006-A01-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY711285 ID=EY711285; Name=EY711285; organism=Citrus sinensis; type=EST; length=862bp
GTTTCTTCATTCTCACACGAGAATAGAAGGATTTTTGTTTTGATTGGGTC
GGTTCCAAGAAGTTTTTTTTGTCTACCTTACTTTCTTTTCTTCATTTTTA
TCTTATATCAATAAGATATTAATAACTCAATCAAAATAAAATTATCTCCA
AGAACAAAATGTTTGTTATGCTTAATATCTTTAGTTTAATGTATATCTGT
CTTAATTCTGCCCTTTATTCGAGTAGTTTTTTATTCGCTAAATTACCCGA
GGCCTACGCTTTTTTGAATCCAATTGTAGATGTTATGCCAGTAATACCTG
TTCTATTTTTTCTCTTAGCCTTTGTTTGGCAAGCTGCTGTAAGTTTTCGA
TAAGATCTTTAATATTGTGCTAAAAAAATTCATGATTTATTCTAGTTCGA
AAAAAAAAAAATTCTAACAATTAATAAATAAGAGCAGATGAGNTTTACAT
TATGAACGAACCCCGGCTCAATTCAAACANTCAAACAATGAAATCCTTGG
GGAACCCCGATCCTTTTTGATCCCCCATTTTGCTATTTGCAATTTTTGAC
CCTTTTCACTGAAACCACTTTATTTAAAGCCAACCAAAAGTAAAATTCCA
ATTGTGTGAACTTAATTTATTGAAACGATTTCTTATTTATAAATAAAAAT
TTAAACAAAACTTCTTTGTTTTGTTGTCACATTGGAATGGAATCATAAAA
AAAAGAACTTTTTTCCTTTTTCCCTTTCCCCAAAAACCTATTTGAAAATA
TGTAATGGTTAATCCCAAACTCTTTGTTAACCCCAGTGAATTTCCTTTGT
TCCATCTTCTCCTCGGAATCCCGGCAAAGACAAAGGGCGAACCCCGACGC
CAAAAAANCAAG
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