EY711247

Overview
NameEY711247
Unique NameEY711247
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length894
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY711247 vs. ExPASy Swiss-Prot
Match: KLC4_RAT (Kinesin light chain 4 OS=Rattus norvegicus GN=Klc4 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.537e-13
Identity = 60/227 (26.43%), Postives = 93/227 (40.97%), Query Frame = 2
Query:   41 AEGLLSEAYTLFSEAFSILQQVTGPMHREVANCCRYLAMVLYHAGDMAGAIMQQHKELIINERCLGLDHPDTAHSYGNMALFYHGLNQTEXXXXXXXXXXXXXXXXXGPDHPDVAATFINVAMMYQDIGKMDTALRYLQEALKKNERLLGEEHIQTAVCYHALAIAFNCMGAFKLSHQHEKKTYDILVKQLGEEDSRTKDSQN--WMKTFKMRELQMNVQKQKGQAF 715
            A+G    A  L  +A   L++ +G  H +VA     LA+V         A    +  L I E  LG DHP  A +  N+A+ Y    + +                 G DHPDVA    N+A++ Q+ GK +   RY Q AL   ER LG ++   A   + LA  +   G +    + E    +IL +   +E     D     WM   +  E+  +  ++ G  +
Sbjct:  223 AQGRYEVAVPLCKQALEDLERTSGRGHPDVATMLNILALVYRDQNKYKEAAHLLNDALSIRESTLGRDHPAVAATLNNLAVLYGKRGKYKEAEPLCQRALEIREKVLGTDHPDVAKQLNNLALLCQNQGKYEAVERYYQRALAIYERQLGPDNPNVARTKNNLASCYLKQGKYS---EAETLYKEILTRAHVQEFGSVDDDHKPIWMHAEEREEMSRSRSRESGTPY 446          
BLAST of EY711247 vs. ExPASy Swiss-Prot
Match: KLC_STRPU (Kinesin light chain OS=Strongylocentrotus purpuratus PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.670e-12
Identity = 57/209 (27.27%), Postives = 89/209 (42.58%), Query Frame = 2
Query:   62 AYTLFSEAFSILQQVTGPMHREVANCCRYLAMVLYHAGDMAGAIMQQHKELIINERCLGLDHPDTAHSYGNMALFYHGLNQTEXXXXXXXXXXXXXXXXXGPDHPDVAATFINVAMMYQDIGKMDTALRYLQEALKKNERLLGEEHIQTAVCYHALAIAFNCMGAFKLSHQHEKKTYDILVKQLGEEDSRTKDSQN----WMKTFKMRE 676
            A  L  +A   L++ +G  H +VA     LA+V         A    H  L I E+ LG DHP  A +  N+A+ Y    + +                 G DHPDVA    N+A++ Q+ GK +    Y Q AL+  E+ LG +    A   + LA A+   G +K +    K+   +L +    E   + D ++    WM+  +  E
Sbjct:  234 AVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQNKYKEAGNLLHDALAIREKTLGPDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKDHPDVAKQLNNLALLCQNQGKYEEVEWYYQRALEIYEKKLGPDDPNVAKTKNNLAAAYLKQGKYKAAETLYKQ---VLTRAHEREFGLSADDKDNKPIWMQAEEREE 439          
BLAST of EY711247 vs. ExPASy Swiss-Prot
Match: KLC1_RAT (Kinesin light chain 1 OS=Rattus norvegicus GN=Klc1 PE=2 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 8.712e-12
Identity = 56/215 (26.05%), Postives = 89/215 (41.40%), Query Frame = 2
Query:   41 AEGLLSEAYTLFSEAFSILQQVTGPMHREVANCCRYLAMVLYHAGDMAGAIMQQHKELIINERCLGLDHPDTAHSYGNMALFYHGLNQTEXXXXXXXXXXXXXXXXXGPDHPDVAATFINVAMMYQDIGKMDTALRYLQEALKKNERLLGEEHIQTAVCYHALAIAFNCMGAFKLSHQHEKKTYDILVKQLGEEDSRTKDSQN---WMKTFKMRE 676
            ++G    A  L  +A   L++ +G  H +VA     LA+V         A    +  L I E+ LG DHP  A +  N+A+ Y    + +                 G DHPDVA    N+A++ Q+ GK +    Y Q AL+  +  LG +    A   + LA  +   G FK      +  Y  ++ +  E +  + D +N   WM   +  E
Sbjct:  225 SQGRYEVAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQNKYKDAANLLNDALAIREKTLGRDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKDHPDVAKQLNNLALLCQNQGKYEEVEYYYQRALEIYQTKLGPDDPNVAKTKNNLASCYLKQGKFK----QAETLYKEILTRAHEREFGSVDDENKPIWMHAEEREE 435          
BLAST of EY711247 vs. ExPASy Swiss-Prot
Match: KLC1_PONAB (Kinesin light chain 1 OS=Pongo abelii GN=KLC1 PE=2 SV=3)

HSP 1 Score: 71.2478 bits (173), Expect = 8.712e-12
Identity = 56/215 (26.05%), Postives = 89/215 (41.40%), Query Frame = 2
Query:   41 AEGLLSEAYTLFSEAFSILQQVTGPMHREVANCCRYLAMVLYHAGDMAGAIMQQHKELIINERCLGLDHPDTAHSYGNMALFYHGLNQTEXXXXXXXXXXXXXXXXXGPDHPDVAATFINVAMMYQDIGKMDTALRYLQEALKKNERLLGEEHIQTAVCYHALAIAFNCMGAFKLSHQHEKKTYDILVKQLGEEDSRTKDSQN---WMKTFKMRE 676
            ++G    A  L  +A   L++ +G  H +VA     LA+V         A    +  L I E+ LG DHP  A +  N+A+ Y    + +                 G DHPDVA    N+A++ Q+ GK +    Y Q AL+  +  LG +    A   + LA  +   G FK      +  Y  ++ +  E +  + D +N   WM   +  E
Sbjct:  225 SQGRYEVAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQNKYKDAANLLNDALAIREKTLGKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKDHPDVAKQLNNLALLCQNQGKYEEVEYYYQRALEIYQTKLGPDDPNVAKTKNNLASCYLKQGKFK----QAETLYKEILTRAHEREFGSVDDENKPIWMHAEEREE 435          
BLAST of EY711247 vs. ExPASy Swiss-Prot
Match: KLC1_HUMAN (Kinesin light chain 1 OS=Homo sapiens GN=KLC1 PE=1 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 8.712e-12
Identity = 56/215 (26.05%), Postives = 89/215 (41.40%), Query Frame = 2
Query:   41 AEGLLSEAYTLFSEAFSILQQVTGPMHREVANCCRYLAMVLYHAGDMAGAIMQQHKELIINERCLGLDHPDTAHSYGNMALFYHGLNQTEXXXXXXXXXXXXXXXXXGPDHPDVAATFINVAMMYQDIGKMDTALRYLQEALKKNERLLGEEHIQTAVCYHALAIAFNCMGAFKLSHQHEKKTYDILVKQLGEEDSRTKDSQN---WMKTFKMRE 676
            ++G    A  L  +A   L++ +G  H +VA     LA+V         A    +  L I E+ LG DHP  A +  N+A+ Y    + +                 G DHPDVA    N+A++ Q+ GK +    Y Q AL+  +  LG +    A   + LA  +   G FK      +  Y  ++ +  E +  + D +N   WM   +  E
Sbjct:  225 SQGRYEVAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQNKYKDAANLLNDALAIREKTLGKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKDHPDVAKQLNNLALLCQNQGKYEEVEYYYQRALEIYQTKLGPDDPNVAKTKNNLASCYLKQGKFK----QAETLYKEILTRAHEREFGSVDDENKPIWMHAEEREE 435          
BLAST of EY711247 vs. ExPASy Swiss-Prot
Match: TIF31_CRYNE (Protein TIF31 homolog OS=Cryptococcus neoformans GN=TIF31 PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.941e-11
Identity = 52/265 (19.62%), Postives = 103/265 (38.87%), Query Frame = 2
Query:    5 ASDLVVMGKVQLAEGLLSEAYTLFSEAFSILQQVTGPMHREVANCCRYLAMVLYHAG---------------------DMAGAIMQQHKELIINERCLGLDHPDTAHSYGNMALFYHGLNQTEXXXXXXXXXXXXXXXXXGPDHPDVAATFINVAMMYQDIGKMDTALRYLQEALKKNERLLGEEHIQTAVCYHALAIAFNCMGAFKLSHQHEKKTYDILVKQLGEEDSRTKDSQNWMKTFKMRELQMNVQKQKGQAFNAASTQK 736
            A +++  G+  +  G +        EA  + + +   +H EVA+     A  ++                        D++GA+  Q + + I ER LG+ H +TA  Y  +A+  +     +                 GP HP+++    N  ++ Q +  +  +L   ++A +      G  HIQT    H L       G    + +  K+  +I   +LGEE ++TK+    ++           QK++ +A    +T++
Sbjct: 1113 AEEILEAGRNTINRGKIEFGLDFMLEAIQLYESIHSVIHPEVASVYNSYAQAIHQIARLKIQQIAAQENPDPEQPLGVDISGALRFQRQAVAIAERTLGVYHHETAGYYFQLAMLENLEGNAQQSLRYFRHLLTLWDVIYGPGHPEISTILSNAGIVLQSMNDLSLSLSLQKQAYESTLACFGPNHIQTGQSLHQLVQGHFLAGDMASALETAKQALEIFKARLGEEHNQTKEEAKNVELLTAVIENQERQKEREEAVKKEATER 1377          
BLAST of EY711247 vs. ExPASy Swiss-Prot
Match: KLC4_MOUSE (Kinesin light chain 4 OS=Mus musculus GN=Klc4 PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.941e-11
Identity = 58/214 (27.10%), Postives = 87/214 (40.65%), Query Frame = 2
Query:   41 AEGLLSEAYTLFSEAFSILQQVTGPMHREVANCCRYLAMVLYHAGDMAGAIMQQHKELIINERCLGLDHPDTAHSYGNMALFYHGLNQTEXXXXXXXXXXXXXXXXXGPDHPDVAATFINVAMMYQDIGKMDTALRYLQEALKKNERLLGEEHIQTAVCYHALAIAFNCMGAFKLSHQHEKKTYDIL-VKQLGEEDSRTKDSQNWMKTFKMREL 679
            A+G    A  L  +A   L++ +G  H +VA     LA+V         A    +  L I E  LG DHP  A +  N+A+ Y    + +                 G DHPDVA    N+A++ Q+ GK +   RY Q AL   E  LG ++   A   + LA  +   G +  +    K+      V++ G  D   K    WM   +  E+
Sbjct:  223 AQGRYEVAVPLCKQALEDLERTSGRGHPDVATMLNILALVYRDQNKYKEAAHLLNDALSIRESTLGRDHPAVAATLNNLAVLYGKRGKYKEAEPLCQRALEIREKVLGTDHPDVAKQLNNLALLCQNQGKYEAVERYYQRALAIYESQLGPDNPNVARTKNNLASCYLKQGKYSEAEALYKEILTCAHVQEFGSVDDDHKPI--WMHAEEREEM 434          
BLAST of EY711247 vs. ExPASy Swiss-Prot
Match: KLC_CAEEL (Kinesin light chain OS=Caenorhabditis elegans GN=klc-2 PE=1 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 2.535e-11
Identity = 48/182 (26.37%), Postives = 81/182 (44.51%), Query Frame = 2
Query:   41 AEGLLSEAYTLFSEAFSILQQVTGPMHREVANCCRYLAMVLYHAGDMAGAIMQQHKELIINERCLGLDHPDTAHSYGNMALFYHGLNQTEXXXXXXXXXXXXXXXXXGPDHPDVAATFINVAMMYQDIGKMDTALRYLQEALKKNERLLGEEHIQTAVCYHALAIAFNCMGAFKLSHQHEKK 586
            ++G    A  L  +A   L++ +G  H +VA     LA+V         A    ++ L I E+CLG  HP  A +  N+A+ +    + +                 G DHPDVA    N+A++ Q+ GK +   +Y + AL+  E  LG +    A   + L+ A+   G +K + +  K+
Sbjct:  218 SQGRYEVAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQNKYKEAANLLNEALSIREKCLGESHPAVAATLNNLAVLFGKRGKFKDAEPLCKRALEIREKVLGDDHPDVAKQLNNLALLCQNQGKYEEVEKYYKRALEIYESKLGPDDPNVAKTKNNLSSAYLKQGKYKEAEELYKQ 399          
BLAST of EY711247 vs. ExPASy Swiss-Prot
Match: KLC4_HUMAN (Kinesin light chain 4 OS=Homo sapiens GN=KLC4 PE=1 SV=3)

HSP 1 Score: 68.5514 bits (166), Expect = 5.647e-11
Identity = 58/227 (25.55%), Postives = 91/227 (40.09%), Query Frame = 2
Query:   41 AEGLLSEAYTLFSEAFSILQQVTGPMHREVANCCRYLAMVLYHAGDMAGAIMQQHKELIINERCLGLDHPDTAHSYGNMALFYHGLNQTEXXXXXXXXXXXXXXXXXGPDHPDVAATFINVAMMYQDIGKMDTALRYLQEALKKNERLLGEEHIQTAVCYHALAIAFNCMGAFKLSHQHEKKTYDILVKQLGEEDSRTKDSQN--WMKTFKMRELQMNVQKQKGQAF 715
            A+G    A  L  +A   L++ +G  H +VA     LA+V         A    +  L I E  LG DHP  A +  N+A+ Y    + +                 G +HPDVA    N+A++ Q+ GK +   RY Q AL   E  LG ++   A   + LA  +   G +    + E    +IL +   +E     D     WM   +  E+  +   + G  +
Sbjct:  223 AQGRYEVAVPLCKQALEDLERTSGRGHPDVATMLNILALVYRDQNKYKEAAHLLNDALSIRESTLGPDHPAVAATLNNLAVLYGKRGKYKEAEPLCQRALEIREKVLGTNHPDVAKQLNNLALLCQNQGKYEAVERYYQRALAIYEGQLGPDNPNVARTKNNLASCYLKQGKYA---EAETLYKEILTRAHVQEFGSVDDDHKPIWMHAEEREEMSKSRHHEGGTPY 446          
The following BLAST results are available for this feature:
BLAST of EY711247 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 49
Match NameE-valueIdentityDescription
KLC4_RAT3.537e-1326.43Kinesin light chain 4 OS=Rattus norvegicus GN=Klc4... [more]
KLC_STRPU6.670e-1227.27Kinesin light chain OS=Strongylocentrotus purpurat... [more]
KLC1_RAT8.712e-1226.05Kinesin light chain 1 OS=Rattus norvegicus GN=Klc1... [more]
KLC1_PONAB8.712e-1226.05Kinesin light chain 1 OS=Pongo abelii GN=KLC1 PE=2... [more]
KLC1_HUMAN8.712e-1226.05Kinesin light chain 1 OS=Homo sapiens GN=KLC1 PE=1... [more]
TIF31_CRYNE1.941e-1119.62Protein TIF31 homolog OS=Cryptococcus neoformans G... [more]
KLC4_MOUSE1.941e-1127.10Kinesin light chain 4 OS=Mus musculus GN=Klc4 PE=1... [more]
KLC_CAEEL2.535e-1126.37Kinesin light chain OS=Caenorhabditis elegans GN=k... [more]
KLC4_HUMAN5.647e-1125.55Kinesin light chain 4 OS=Homo sapiens GN=KLC4 PE=1... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-702-005-E09-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY711247 ID=EY711247; Name=EY711247; organism=Citrus sinensis; type=EST; length=894bp
CCACGCGTCCGACCTCGTTGTAATGGGAAAGGTTCAATTAGCTGAGGGTC
TGCTTAGTGAAGCCTACACATTATTTTCTGAGGCATTTTCTATACTTCAA
CAGGTGACCGGTCCTATGCATCGCGAGGTTGCTAACTGCTGTAGGTACCT
TGCCATGGTTTTATACCACGCAGGAGACATGGCTGGAGCTATAATGCAAC
AGCACAAGGAATTAATCATTAATGAGCGTTGCTTGGGTTTGGATCACCCT
GATACTGCTCACAGCTACGGCAATATGGCTCTTTTCTATCATGGCCTTAA
CCAAACAGAACTTGCGTTACGACACATGTCACGGGCATTGCTCTTACTGA
GTCTTTCATCTGGACCCGACCACCCTGATGTGGCTGCAACTTTCATAAAT
GTTGCAATGATGTACCAGGACATTGGAAAGATGGACACAGCTCTCCGCTA
TTTGCAAGAGGCATTGAAAAAGAATGAGAGGCTCCTAGGCGAGGAGCATA
TACAGACCGCTGTTTGCTACCATGCTCTTGCAATTGCCTTCAACTGCATG
GGTGCCTTCAAGCTTTCTCACCAGCATGAGAAGAAAACCTATGATATACT
TGTCAAACAACTTGGCGAGGAGGACTCGAGGACAAAAGATTCTCAAAACT
GGATGAAGACATTTAAAATGCGTGAACTTCAGATGAATGTACAAAAGCAG
AAAGGACAAGCTTTTAATGCTGCTTCTACACAAAAGGCTATTGATATTTT
AAGGCCCATCCTGATTTATACATGCATTCCANGCTGTGGCCGCAGCCGGA
AGATCTGGTATTCTNGAGCGTCAGCCAACATTCACTTATGCAGCGCTACT
GGTGAGACCCTTCCGCCGGGGAAGGGATTGATGAGAGACAACTC
back to top