EY711199

Overview
NameEY711199
Unique NameEY711199
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length875
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY711199 vs. ExPASy Swiss-Prot
Match: PROF_CHEAL (Profilin OS=Chenopodium album PE=1 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.256e-15
Identity = 35/44 (79.55%), Postives = 42/44 (95.45%), Query Frame = 1
Query:   82 MSWQTYVDDHLMCDIDGHHLTSAAIVGHDGSVWAQSSNFPQVIP 213
            MSWQTYVDDHLMCDI+G+HL+SAAI+GHDG+VWAQS +FPQ+ P
Sbjct:    1 MSWQTYVDDHLMCDIEGNHLSSAAILGHDGTVWAQSPSFPQLKP 44          
BLAST of EY711199 vs. ExPASy Swiss-Prot
Match: PROF2_LILLO (Profilin-2 OS=Lilium longiflorum PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.256e-15
Identity = 34/42 (80.95%), Postives = 40/42 (95.24%), Query Frame = 1
Query:   82 MSWQTYVDDHLMCDIDGHHLTSAAIVGHDGSVWAQSSNFPQV 207
            MSWQTYVD+HLMC+IDG HLT+AAI+GHDGS+WAQS +FPQV
Sbjct:    1 MSWQTYVDEHLMCEIDGQHLTAAAIIGHDGSIWAQSESFPQV 42          
BLAST of EY711199 vs. ExPASy Swiss-Prot
Match: PROF3_MAIZE (Profilin-3 OS=Zea mays GN=PRO3 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.640e-15
Identity = 35/44 (79.55%), Postives = 41/44 (93.18%), Query Frame = 1
Query:   82 MSWQTYVDDHLMCDIDGHHLTSAAIVGHDGSVWAQSSNFPQVIP 213
            MSWQTYVD+HLMC+I+GHHL+SAAIVGHDG+VWAQS+ FPQ  P
Sbjct:    1 MSWQTYVDEHLMCEIEGHHLSSAAIVGHDGAVWAQSTAFPQFKP 44          
BLAST of EY711199 vs. ExPASy Swiss-Prot
Match: PROF3_LILLO (Profilin-3 OS=Lilium longiflorum PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.640e-15
Identity = 34/52 (65.38%), Postives = 43/52 (82.69%), Query Frame = 1
Query:   82 MSWQTYVDDHLMCDIDGHHLTSAAIVGHDGSVWAQSSNFPQVIPNLSCLSLR 237
            MSWQTYVD+HLMC+IDG HLT+AAI+GH+G +WAQS +FPQV P  +   +R
Sbjct:    1 MSWQTYVDEHLMCEIDGQHLTAAAIIGHEGGIWAQSDSFPQVKPEQTAAIMR 52          
BLAST of EY711199 vs. ExPASy Swiss-Prot
Match: PROF1_RICCO (Profilin-1 OS=Ricinus communis GN=PRO1 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.640e-15
Identity = 36/44 (81.82%), Postives = 40/44 (90.91%), Query Frame = 1
Query:   82 MSWQTYVDDHLMCDIDGHHLTSAAIVGHDGSVWAQSSNFPQVIP 213
            MSWQTYVDDHLMC+I+G+HLTSAAI+G DGSVWAQSS FPQ  P
Sbjct:    1 MSWQTYVDDHLMCEIEGNHLTSAAIIGQDGSVWAQSSTFPQFKP 44          
BLAST of EY711199 vs. ExPASy Swiss-Prot
Match: PROF_CROSA (Profilin OS=Crocus sativus PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.142e-15
Identity = 35/44 (79.55%), Postives = 41/44 (93.18%), Query Frame = 1
Query:   82 MSWQTYVDDHLMCDIDGHHLTSAAIVGHDGSVWAQSSNFPQVIP 213
            MSWQTYVD+HLMCD+DGH LTSAAI+GHDGSVWAQS+ FP++ P
Sbjct:    1 MSWQTYVDEHLMCDMDGHVLTSAAILGHDGSVWAQSAGFPELKP 44          
BLAST of EY711199 vs. ExPASy Swiss-Prot
Match: PROF2_PHLPR (Profilin-2/4 OS=Phleum pratense GN=PRO2 PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.142e-15
Identity = 34/44 (77.27%), Postives = 41/44 (93.18%), Query Frame = 1
Query:   82 MSWQTYVDDHLMCDIDGHHLTSAAIVGHDGSVWAQSSNFPQVIP 213
            MSWQTYVD+HLMC+I+GHHL SAAI+GHDG+VWAQS++FPQ  P
Sbjct:    1 MSWQTYVDEHLMCEIEGHHLASAAILGHDGTVWAQSADFPQFKP 44          
BLAST of EY711199 vs. ExPASy Swiss-Prot
Match: PROF1_PHLPR (Profilin-1 OS=Phleum pratense GN=PRO1 PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.142e-15
Identity = 34/44 (77.27%), Postives = 41/44 (93.18%), Query Frame = 1
Query:   82 MSWQTYVDDHLMCDIDGHHLTSAAIVGHDGSVWAQSSNFPQVIP 213
            MSWQTYVD+HLMC+I+GHHL SAAI+GHDG+VWAQS++FPQ  P
Sbjct:    1 MSWQTYVDEHLMCEIEGHHLASAAILGHDGTVWAQSADFPQFKP 44          
BLAST of EY711199 vs. ExPASy Swiss-Prot
Match: PROF5_MAIZE (Profilin-5 OS=Zea mays GN=PRO5 PE=1 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.798e-15
Identity = 34/44 (77.27%), Postives = 40/44 (90.91%), Query Frame = 1
Query:   82 MSWQTYVDDHLMCDIDGHHLTSAAIVGHDGSVWAQSSNFPQVIP 213
            MSWQ YVDDHL+CDI+G HL++AAIVGHDGSVWAQS NFP++ P
Sbjct:    1 MSWQAYVDDHLLCDIEGQHLSAAAIVGHDGSVWAQSENFPELKP 44          
BLAST of EY711199 vs. ExPASy Swiss-Prot
Match: PROF3_AMBAR (Profilin-3 OS=Ambrosia artemisiifolia GN=D03 PE=1 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.798e-15
Identity = 37/46 (80.43%), Postives = 41/46 (89.13%), Query Frame = 1
Query:   82 MSWQTYVDDHLMCDIDG--HHLTSAAIVGHDGSVWAQSSNFPQVIP 213
            MSWQ YVD+HLMCDI+G  HHLTSAAI+GHDG+VWAQSSNFPQ  P
Sbjct:    1 MSWQAYVDEHLMCDIEGTGHHLTSAAILGHDGTVWAQSSNFPQFKP 46          
The following BLAST results are available for this feature:
BLAST of EY711199 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 72
Match NameE-valueIdentityDescription
PROF_CHEAL1.256e-1579.55Profilin OS=Chenopodium album PE=1 SV=1[more]
PROF2_LILLO1.256e-1580.95Profilin-2 OS=Lilium longiflorum PE=2 SV=1[more]
PROF3_MAIZE1.640e-1579.55Profilin-3 OS=Zea mays GN=PRO3 PE=2 SV=1[more]
PROF3_LILLO1.640e-1565.38Profilin-3 OS=Lilium longiflorum PE=2 SV=1[more]
PROF1_RICCO1.640e-1581.82Profilin-1 OS=Ricinus communis GN=PRO1 PE=2 SV=1[more]
PROF_CROSA2.142e-1579.55Profilin OS=Crocus sativus PE=1 SV=1[more]
PROF2_PHLPR2.142e-1577.27Profilin-2/4 OS=Phleum pratense GN=PRO2 PE=1 SV=1[more]
PROF1_PHLPR2.142e-1577.27Profilin-1 OS=Phleum pratense GN=PRO1 PE=1 SV=1[more]
PROF5_MAIZE2.798e-1577.27Profilin-5 OS=Zea mays GN=PRO5 PE=1 SV=1[more]
PROF3_AMBAR2.798e-1580.43Profilin-3 OS=Ambrosia artemisiifolia GN=D03 PE=1 ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-005-A04-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY711199 ID=EY711199; Name=EY711199; organism=Citrus sinensis; type=EST; length=875bp
CCACGCGTCCGCGAGGGGAAGGAATTAACATAGGAATTAAACAAACAATT
GAATTTGCCGTGAGAATTTAGATTGTTGAAAATGTCGTGGCAAACATACG
TTGATGATCATCTGATGTGCGATATCGACGGCCATCATCTCACCTCAGCT
GCGATCGTCGGTCACGACGGCAGCGTTTGGGCCCAGAGCTCCAATTTCCC
TCAGGTTATACCAAATCTCTCTTGTTTATCTCTTCGATTTTATTTACCGA
TCTGTTATTAATTTATTGTTACGTTCCATTTTCTAATTGCACGGATCTGA
TTGTTCCAATTTTTATTTTTTTTGGCTTAATTGATAATTATTAGCATTCA
GATTAGTTTGTTGCCATGATTTGAATCAAAAGTAAAAATGAAAATGTTAG
ATTTACGTTTTTAGATTGTAAAAATTAAGAATTTTACTGAAAACCAGAAT
AAATTATGAAACTGTAAGTATAAAAATCAAAACTTGTATATGATGATATA
GGTTGTATTTGCTTGTGGCTTTACAATGACCATTTCGTAATTCACTATTA
ATCTTGAGAAAATTATAGAATTTTCAAATAAAAAATAGATAAAAAAAAAT
GTGTTGCTAATGTTAAGACTGTCAAGGGCATGTTTGTTAATGTTGAGTTT
CTGATAATTTTGCAAACACACAGCTAAGTGNTTATGAGCACTCAGTCTCT
AATGATTCCATTCCACACAGCTGTGGCTTAAAAGCATATCTCCTCATTCC
AAGATAATTAAATGATTTGGAGATTTTTATTTTTGGGTTTCATATGCAAT
TTATTGGTTTGTTCCAGAATTTTTGTTGNAAATGCTATCAGGAACTTTCT
CAATCTCAAATACAAATTTATTTNC
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