EY711199

Overview
NameEY711199
Unique NameEY711199
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length875
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY711199 vs. ExPASy Swiss-Prot
Match: PROF3_PHLPR (Profilin-3 OS=Phleum pratense GN=PRO3 PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.654e-15
Identity = 34/44 (77.27%), Postives = 40/44 (90.91%), Query Frame = 1
Query:   82 MSWQTYVDDHLMCDIDGHHLTSAAIVGHDGSVWAQSSNFPQVIP 213
            MSWQTYVD+HLMC+I+GHHL SAAI GHDG+VWAQS++FPQ  P
Sbjct:    1 MSWQTYVDEHLMCEIEGHHLASAAIFGHDGTVWAQSADFPQFKP 44          
BLAST of EY711199 vs. ExPASy Swiss-Prot
Match: PROF1_MAIZE (Profilin-1 OS=Zea mays GN=PRO1 PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.654e-15
Identity = 34/44 (77.27%), Postives = 40/44 (90.91%), Query Frame = 1
Query:   82 MSWQTYVDDHLMCDIDGHHLTSAAIVGHDGSVWAQSSNFPQVIP 213
            MSWQTYVD+HLMC+I+GHHLTSAAIVGHDG+ WAQS+ FP+  P
Sbjct:    1 MSWQTYVDEHLMCEIEGHHLTSAAIVGHDGATWAQSTAFPEFKP 44          
BLAST of EY711199 vs. ExPASy Swiss-Prot
Match: PROF_CYNDA (Profilin OS=Cynodon dactylon GN=PRO1 PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.772e-15
Identity = 34/44 (77.27%), Postives = 39/44 (88.64%), Query Frame = 1
Query:   82 MSWQTYVDDHLMCDIDGHHLTSAAIVGHDGSVWAQSSNFPQVIP 213
            MSWQ YVDDHLMC+I+GHHLTSAAI+GHDG+VWAQS+ FP   P
Sbjct:    1 MSWQAYVDDHLMCEIEGHHLTSAAIIGHDGTVWAQSAAFPAFKP 44          
BLAST of EY711199 vs. ExPASy Swiss-Prot
Match: PROF3_ARATH (Profilin-3 OS=Arabidopsis thaliana GN=PRO3 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.772e-15
Identity = 36/44 (81.82%), Postives = 40/44 (90.91%), Query Frame = 1
Query:   82 MSWQTYVDDHLMCDI---DGHHLTSAAIVGHDGSVWAQSSNFPQ 204
            MSWQTYVD+HLMCD+    GHHLT+AAIVGHDGSVWAQS+NFPQ
Sbjct:    1 MSWQTYVDEHLMCDVGDGQGHHLTAAAIVGHDGSVWAQSANFPQ 44          
BLAST of EY711199 vs. ExPASy Swiss-Prot
Match: PROF1_MALDO (Profilin-1 OS=Malus domestica PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.772e-15
Identity = 35/44 (79.55%), Postives = 38/44 (86.36%), Query Frame = 1
Query:   82 MSWQTYVDDHLMCDIDGHHLTSAAIVGHDGSVWAQSSNFPQVIP 213
            MSWQ YVDD LMCDIDGHHLT+AAI+GHDGSVWA SS FP+  P
Sbjct:    1 MSWQAYVDDRLMCDIDGHHLTAAAILGHDGSVWAHSSTFPKFKP 44          
BLAST of EY711199 vs. ExPASy Swiss-Prot
Match: PROF_PRUPE (Profilin OS=Prunus persica PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 6.232e-15
Identity = 33/44 (75.00%), Postives = 41/44 (93.18%), Query Frame = 1
Query:   82 MSWQTYVDDHLMCDIDGHHLTSAAIVGHDGSVWAQSSNFPQVIP 213
            MSWQ YVDDHLMC+I+G+HL++AAI+GHDGSVWAQS+ FPQ+ P
Sbjct:    1 MSWQAYVDDHLMCEIEGNHLSAAAIIGHDGSVWAQSATFPQLKP 44          
BLAST of EY711199 vs. ExPASy Swiss-Prot
Match: PROF_CUCME (Profilin OS=Cucumis melo PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 6.232e-15
Identity = 34/44 (77.27%), Postives = 40/44 (90.91%), Query Frame = 1
Query:   82 MSWQTYVDDHLMCDIDGHHLTSAAIVGHDGSVWAQSSNFPQVIP 213
            MSWQ YVD+HLMC+I+G+HLTSAAI+G DGSVWAQS NFPQ+ P
Sbjct:    1 MSWQVYVDEHLMCEIEGNHLTSAAIIGQDGSVWAQSQNFPQLKP 44          
BLAST of EY711199 vs. ExPASy Swiss-Prot
Match: PROF1_HORVU (Profilin-1 OS=Hordeum vulgare GN=PRO1 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 6.232e-15
Identity = 35/44 (79.55%), Postives = 37/44 (84.09%), Query Frame = 1
Query:   82 MSWQTYVDDHLMCDIDGHHLTSAAIVGHDGSVWAQSSNFPQVIP 213
            MSWQTYVDDHL C+IDG HLTSAAI+GHDG VW QS NFPQ  P
Sbjct:    1 MSWQTYVDDHLCCEIDGQHLTSAAILGHDGRVWVQSPNFPQFKP 44          
BLAST of EY711199 vs. ExPASy Swiss-Prot
Match: PROF5_ARATH (Profilin-5 OS=Arabidopsis thaliana GN=PRO5 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 8.140e-15
Identity = 35/44 (79.55%), Postives = 40/44 (90.91%), Query Frame = 1
Query:   82 MSWQTYVDDHLMCDIDGHHLTSAAIVGHDGSVWAQSSNFPQVIP 213
            MSWQTYVDDHLMCD+ G+ LT+AAI+G DGSVWAQS+NFPQV P
Sbjct:    1 MSWQTYVDDHLMCDVAGNRLTAAAILGQDGSVWAQSNNFPQVKP 44          
BLAST of EY711199 vs. ExPASy Swiss-Prot
Match: PROF4_ARATH (Profilin-4 OS=Arabidopsis thaliana GN=PRO4 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.063e-14
Identity = 35/47 (74.47%), Postives = 40/47 (85.11%), Query Frame = 1
Query:   82 MSWQTYVDDHLMCDI---DGHHLTSAAIVGHDGSVWAQSSNFPQVIP 213
            MSWQ YVD+HLMCD+    GHHLT+AAI+GHDGSVWAQS+NFPQ  P
Sbjct:    1 MSWQAYVDEHLMCDVGDGQGHHLTAAAIIGHDGSVWAQSANFPQFKP 47          
The following BLAST results are available for this feature:
BLAST of EY711199 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 72
Match NameE-valueIdentityDescription
PROF3_PHLPR3.654e-1577.27Profilin-3 OS=Phleum pratense GN=PRO3 PE=1 SV=1[more]
PROF1_MAIZE3.654e-1577.27Profilin-1 OS=Zea mays GN=PRO1 PE=1 SV=1[more]
PROF_CYNDA4.772e-1577.27Profilin OS=Cynodon dactylon GN=PRO1 PE=1 SV=1[more]
PROF3_ARATH4.772e-1581.82Profilin-3 OS=Arabidopsis thaliana GN=PRO3 PE=2 SV... [more]
PROF1_MALDO4.772e-1579.55Profilin-1 OS=Malus domestica PE=1 SV=1[more]
PROF_PRUPE6.232e-1575.00Profilin OS=Prunus persica PE=1 SV=1[more]
PROF_CUCME6.232e-1577.27Profilin OS=Cucumis melo PE=1 SV=1[more]
PROF1_HORVU6.232e-1579.55Profilin-1 OS=Hordeum vulgare GN=PRO1 PE=2 SV=1[more]
PROF5_ARATH8.140e-1579.55Profilin-5 OS=Arabidopsis thaliana GN=PRO5 PE=2 SV... [more]
PROF4_ARATH1.063e-1474.47Profilin-4 OS=Arabidopsis thaliana GN=PRO4 PE=2 SV... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-005-A04-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY711199 ID=EY711199; Name=EY711199; organism=Citrus sinensis; type=EST; length=875bp
CCACGCGTCCGCGAGGGGAAGGAATTAACATAGGAATTAAACAAACAATT
GAATTTGCCGTGAGAATTTAGATTGTTGAAAATGTCGTGGCAAACATACG
TTGATGATCATCTGATGTGCGATATCGACGGCCATCATCTCACCTCAGCT
GCGATCGTCGGTCACGACGGCAGCGTTTGGGCCCAGAGCTCCAATTTCCC
TCAGGTTATACCAAATCTCTCTTGTTTATCTCTTCGATTTTATTTACCGA
TCTGTTATTAATTTATTGTTACGTTCCATTTTCTAATTGCACGGATCTGA
TTGTTCCAATTTTTATTTTTTTTGGCTTAATTGATAATTATTAGCATTCA
GATTAGTTTGTTGCCATGATTTGAATCAAAAGTAAAAATGAAAATGTTAG
ATTTACGTTTTTAGATTGTAAAAATTAAGAATTTTACTGAAAACCAGAAT
AAATTATGAAACTGTAAGTATAAAAATCAAAACTTGTATATGATGATATA
GGTTGTATTTGCTTGTGGCTTTACAATGACCATTTCGTAATTCACTATTA
ATCTTGAGAAAATTATAGAATTTTCAAATAAAAAATAGATAAAAAAAAAT
GTGTTGCTAATGTTAAGACTGTCAAGGGCATGTTTGTTAATGTTGAGTTT
CTGATAATTTTGCAAACACACAGCTAAGTGNTTATGAGCACTCAGTCTCT
AATGATTCCATTCCACACAGCTGTGGCTTAAAAGCATATCTCCTCATTCC
AAGATAATTAAATGATTTGGAGATTTTTATTTTTGGGTTTCATATGCAAT
TTATTGGTTTGTTCCAGAATTTTTGTTGNAAATGCTATCAGGAACTTTCT
CAATCTCAAATACAAATTTATTTNC
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