EY711199

Overview
NameEY711199
Unique NameEY711199
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length875
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY711199 vs. ExPASy Swiss-Prot
Match: PROF1_WHEAT (Profilin-1 (Fragment) OS=Triticum aestivum GN=PRO1 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.063e-14
Identity = 34/44 (77.27%), Postives = 38/44 (86.36%), Query Frame = 1
Query:   82 MSWQTYVDDHLMCDIDGHHLTSAAIVGHDGSVWAQSSNFPQVIP 213
            MSWQTYVDDHL C+IDG HLTSAAI+GHDGSVW +S NFP+  P
Sbjct:    1 MSWQTYVDDHLCCEIDGQHLTSAAILGHDGSVWTESPNFPKFKP 44          
BLAST of EY711199 vs. ExPASy Swiss-Prot
Match: PROF1_ARATH (Profilin-1 OS=Arabidopsis thaliana GN=PRO1 PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.063e-14
Identity = 33/44 (75.00%), Postives = 41/44 (93.18%), Query Frame = 1
Query:   82 MSWQTYVDDHLMCDIDGHHLTSAAIVGHDGSVWAQSSNFPQVIP 213
            MSWQ+YVDDHLMCD++G+HLT+AAI+G DGSVWAQS+ FPQ+ P
Sbjct:    1 MSWQSYVDDHLMCDVEGNHLTAAAILGQDGSVWAQSAKFPQLKP 44          
BLAST of EY711199 vs. ExPASy Swiss-Prot
Match: PROF_FRAAN (Profilin OS=Fragaria ananassa PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.388e-14
Identity = 33/44 (75.00%), Postives = 41/44 (93.18%), Query Frame = 1
Query:   82 MSWQTYVDDHLMCDIDGHHLTSAAIVGHDGSVWAQSSNFPQVIP 213
            MSWQTYVDDHLMC+I+G+HL++AAI+G DGSVWAQS+ FPQ+ P
Sbjct:    1 MSWQTYVDDHLMCEIEGNHLSAAAIIGQDGSVWAQSATFPQLKP 44          
BLAST of EY711199 vs. ExPASy Swiss-Prot
Match: PROF_ANACO (Profilin OS=Ananas comosus PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.388e-14
Identity = 34/44 (77.27%), Postives = 38/44 (86.36%), Query Frame = 1
Query:   82 MSWQTYVDDHLMCDIDGHHLTSAAIVGHDGSVWAQSSNFPQVIP 213
            MSWQ YVDDHLMC+IDG HL+SAAI+GHD +VWAQS NFPQ  P
Sbjct:    1 MSWQAYVDDHLMCEIDGQHLSSAAILGHDSTVWAQSPNFPQFKP 44          
BLAST of EY711199 vs. ExPASy Swiss-Prot
Match: PROF2_WHEAT (Profilin-2 OS=Triticum aestivum GN=PRO2 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.388e-14
Identity = 34/44 (77.27%), Postives = 38/44 (86.36%), Query Frame = 1
Query:   82 MSWQTYVDDHLMCDIDGHHLTSAAIVGHDGSVWAQSSNFPQVIP 213
            MSWQ YVDDHL C+IDG HLTSAAI+GHDGSVWA+S NFP+  P
Sbjct:    1 MSWQAYVDDHLCCEIDGQHLTSAAILGHDGSVWAESPNFPKFKP 44          
BLAST of EY711199 vs. ExPASy Swiss-Prot
Match: PROF2_AMBAR (Profilin-2 OS=Ambrosia artemisiifolia GN=A0418 PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.388e-14
Identity = 33/44 (75.00%), Postives = 40/44 (90.91%), Query Frame = 1
Query:   82 MSWQTYVDDHLMCDIDGHHLTSAAIVGHDGSVWAQSSNFPQVIP 213
            MSWQ YVDDHLMC+I+G+HL++AAI+GHDG VWAQS+ FPQV P
Sbjct:    1 MSWQAYVDDHLMCEIEGNHLSAAAIIGHDGVVWAQSATFPQVKP 44          
BLAST of EY711199 vs. ExPASy Swiss-Prot
Match: PROF1_AMBAR (Profilin-1 OS=Ambrosia artemisiifolia GN=D106 PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.388e-14
Identity = 33/44 (75.00%), Postives = 40/44 (90.91%), Query Frame = 1
Query:   82 MSWQTYVDDHLMCDIDGHHLTSAAIVGHDGSVWAQSSNFPQVIP 213
            MSWQ YVDDHLMC+I+G+HL++AAI+GHDG VWAQS+ FPQV P
Sbjct:    1 MSWQAYVDDHLMCEIEGNHLSAAAIIGHDGVVWAQSATFPQVKP 44          
BLAST of EY711199 vs. ExPASy Swiss-Prot
Match: PROF_MERAN (Profilin OS=Mercurialis annua PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.813e-14
Identity = 35/46 (76.09%), Postives = 41/46 (89.13%), Query Frame = 1
Query:   82 MSWQTYVDDHLMCDIDGH--HLTSAAIVGHDGSVWAQSSNFPQVIP 213
            MSWQTYVDDHLMCDIDG   HL +A+IVGHDGS+WAQS++FPQ+ P
Sbjct:    1 MSWQTYVDDHLMCDIDGQGQHLAAASIVGHDGSIWAQSASFPQLKP 46          
BLAST of EY711199 vs. ExPASy Swiss-Prot
Match: PROF2_MALDO (Profilin-2 OS=Malus domestica PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.368e-14
Identity = 32/44 (72.73%), Postives = 41/44 (93.18%), Query Frame = 1
Query:   82 MSWQTYVDDHLMCDIDGHHLTSAAIVGHDGSVWAQSSNFPQVIP 213
            MSWQ YVDDHLMC+I+G+HL++AAI+GH+GSVWAQS+ FPQ+ P
Sbjct:    1 MSWQAYVDDHLMCEIEGNHLSAAAIIGHNGSVWAQSATFPQLKP 44          
BLAST of EY711199 vs. ExPASy Swiss-Prot
Match: PROF_CAPAN (Profilin OS=Capsicum annuum PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.093e-14
Identity = 34/44 (77.27%), Postives = 39/44 (88.64%), Query Frame = 1
Query:   82 MSWQTYVDDHLMCDIDGHHLTSAAIVGHDGSVWAQSSNFPQVIP 213
            MSWQTYVDDHLMC+I+G+ LTSAAI+G DGSVWAQS+ FPQ  P
Sbjct:    1 MSWQTYVDDHLMCEIEGNRLTSAAIIGQDGSVWAQSATFPQFKP 44          
The following BLAST results are available for this feature:
BLAST of EY711199 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 72
Match NameE-valueIdentityDescription
PROF1_WHEAT1.063e-1477.27Profilin-1 (Fragment) OS=Triticum aestivum GN=PRO1... [more]
PROF1_ARATH1.063e-1475.00Profilin-1 OS=Arabidopsis thaliana GN=PRO1 PE=1 SV... [more]
PROF_FRAAN1.388e-1475.00Profilin OS=Fragaria ananassa PE=1 SV=1[more]
PROF_ANACO1.388e-1477.27Profilin OS=Ananas comosus PE=1 SV=1[more]
PROF2_WHEAT1.388e-1477.27Profilin-2 OS=Triticum aestivum GN=PRO2 PE=2 SV=1[more]
PROF2_AMBAR1.388e-1475.00Profilin-2 OS=Ambrosia artemisiifolia GN=A0418 PE=... [more]
PROF1_AMBAR1.388e-1475.00Profilin-1 OS=Ambrosia artemisiifolia GN=D106 PE=1... [more]
PROF_MERAN1.813e-1476.09Profilin OS=Mercurialis annua PE=1 SV=1[more]
PROF2_MALDO2.368e-1472.73Profilin-2 OS=Malus domestica PE=1 SV=1[more]
PROF_CAPAN3.093e-1477.27Profilin OS=Capsicum annuum PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-005-A04-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY711199 ID=EY711199; Name=EY711199; organism=Citrus sinensis; type=EST; length=875bp
CCACGCGTCCGCGAGGGGAAGGAATTAACATAGGAATTAAACAAACAATT
GAATTTGCCGTGAGAATTTAGATTGTTGAAAATGTCGTGGCAAACATACG
TTGATGATCATCTGATGTGCGATATCGACGGCCATCATCTCACCTCAGCT
GCGATCGTCGGTCACGACGGCAGCGTTTGGGCCCAGAGCTCCAATTTCCC
TCAGGTTATACCAAATCTCTCTTGTTTATCTCTTCGATTTTATTTACCGA
TCTGTTATTAATTTATTGTTACGTTCCATTTTCTAATTGCACGGATCTGA
TTGTTCCAATTTTTATTTTTTTTGGCTTAATTGATAATTATTAGCATTCA
GATTAGTTTGTTGCCATGATTTGAATCAAAAGTAAAAATGAAAATGTTAG
ATTTACGTTTTTAGATTGTAAAAATTAAGAATTTTACTGAAAACCAGAAT
AAATTATGAAACTGTAAGTATAAAAATCAAAACTTGTATATGATGATATA
GGTTGTATTTGCTTGTGGCTTTACAATGACCATTTCGTAATTCACTATTA
ATCTTGAGAAAATTATAGAATTTTCAAATAAAAAATAGATAAAAAAAAAT
GTGTTGCTAATGTTAAGACTGTCAAGGGCATGTTTGTTAATGTTGAGTTT
CTGATAATTTTGCAAACACACAGCTAAGTGNTTATGAGCACTCAGTCTCT
AATGATTCCATTCCACACAGCTGTGGCTTAAAAGCATATCTCCTCATTCC
AAGATAATTAAATGATTTGGAGATTTTTATTTTTGGGTTTCATATGCAAT
TTATTGGTTTGTTCCAGAATTTTTGTTGNAAATGCTATCAGGAACTTTCT
CAATCTCAAATACAAATTTATTTNC
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