EY711199

Overview
NameEY711199
Unique NameEY711199
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length875
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY711199 vs. ExPASy Swiss-Prot
Match: PROF_BRANA (Profilin OS=Brassica napus PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 6.891e-14
Identity = 34/44 (77.27%), Postives = 38/44 (86.36%), Query Frame = 1
Query:   82 MSWQTYVDDHLMCDI---DGHHLTSAAIVGHDGSVWAQSSNFPQ 204
            MSWQTYVD+HLMCD+    GHHL +AAI GHDGSVWAQS+NFPQ
Sbjct:    1 MSWQTYVDEHLMCDVGDGQGHHLAAAAIFGHDGSVWAQSANFPQ 44          
BLAST of EY711199 vs. ExPASy Swiss-Prot
Match: PROF2_SOLLC (Profilin-2 OS=Solanum lycopersicum PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 6.891e-14
Identity = 32/44 (72.73%), Postives = 40/44 (90.91%), Query Frame = 1
Query:   82 MSWQTYVDDHLMCDIDGHHLTSAAIVGHDGSVWAQSSNFPQVIP 213
            MSWQTYVD+HL+C+ +G+HLTSAAI+G DG+VWAQS+NFPQ  P
Sbjct:    1 MSWQTYVDEHLLCENEGNHLTSAAIIGQDGTVWAQSANFPQFKP 44          
BLAST of EY711199 vs. ExPASy Swiss-Prot
Match: PROF2_ARATH (Profilin-2 OS=Arabidopsis thaliana GN=PRO2 PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 6.891e-14
Identity = 33/44 (75.00%), Postives = 39/44 (88.64%), Query Frame = 1
Query:   82 MSWQTYVDDHLMCDIDGHHLTSAAIVGHDGSVWAQSSNFPQVIP 213
            MSWQ+YVDDHLMC+++G+HLT AAI G DGSVWAQSS FPQ+ P
Sbjct:    1 MSWQSYVDDHLMCEVEGNHLTHAAIFGQDGSVWAQSSAFPQLKP 44          
BLAST of EY711199 vs. ExPASy Swiss-Prot
Match: PROF1_SOLLC (Profilin-1 OS=Solanum lycopersicum GN=PRO1 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 8.999e-14
Identity = 35/43 (81.40%), Postives = 39/43 (90.70%), Query Frame = 1
Query:   82 MSWQTYVDDHLMCDIDG--HHLTSAAIVGHDGSVWAQSSNFPQ 204
            MSWQTYVDDHLMCDI+G  HHL+SAAI+G DGSVWAQS NFP+
Sbjct:    1 MSWQTYVDDHLMCDIEGTGHHLSSAAILGFDGSVWAQSPNFPK 43          
BLAST of EY711199 vs. ExPASy Swiss-Prot
Match: PROF1_PHAVU (Profilin-1 OS=Phaseolus vulgaris PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.175e-13
Identity = 32/44 (72.73%), Postives = 40/44 (90.91%), Query Frame = 1
Query:   82 MSWQTYVDDHLMCDIDGHHLTSAAIVGHDGSVWAQSSNFPQVIP 213
            MSWQTYVDDHL+C+I+G+HLT AAI+G DGSVWA+S++FPQ  P
Sbjct:    1 MSWQTYVDDHLLCEIEGNHLTHAAILGQDGSVWAKSASFPQFKP 44          
BLAST of EY711199 vs. ExPASy Swiss-Prot
Match: PROF1_TOBAC (Profilin-1 OS=Nicotiana tabacum GN=PRO1 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.005e-13
Identity = 35/47 (74.47%), Postives = 39/47 (82.98%), Query Frame = 1
Query:   82 MSWQTYVDDHLMCDIDG---HHLTSAAIVGHDGSVWAQSSNFPQVIP 213
            MSWQTYVDDHLM DI+G   HHL +AAI+GHDGSVWAQSS FP+  P
Sbjct:    1 MSWQTYVDDHLMADIEGQQGHHLAAAAILGHDGSVWAQSSTFPKFKP 47          
BLAST of EY711199 vs. ExPASy Swiss-Prot
Match: PROF_ARAHY (Profilin OS=Arachis hypogaea PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.618e-13
Identity = 32/44 (72.73%), Postives = 39/44 (88.64%), Query Frame = 1
Query:   82 MSWQTYVDDHLMCDIDGHHLTSAAIVGHDGSVWAQSSNFPQVIP 213
            MSWQTYVD+HL+C+I+G HL+SAAI+G DG VWAQSS+FPQ  P
Sbjct:    1 MSWQTYVDNHLLCEIEGDHLSSAAILGQDGGVWAQSSHFPQFKP 44          
BLAST of EY711199 vs. ExPASy Swiss-Prot
Match: PROF2_MAIZE (Profilin-2 OS=Zea mays GN=PRO2 PE=2 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 2.618e-13
Identity = 30/41 (73.17%), Postives = 37/41 (90.24%), Query Frame = 1
Query:   82 MSWQTYVDDHLMCDIDGHHLTSAAIVGHDGSVWAQSSNFPQ 204
            MSWQ YVD+HLMC+I+GHHL +AAIVGHDG+ WAQS+ FP+
Sbjct:    1 MSWQAYVDEHLMCEIEGHHLAAAAIVGHDGAAWAQSTAFPE 41          
BLAST of EY711199 vs. ExPASy Swiss-Prot
Match: PROF1_PARJU (Profilin-1 OS=Parietaria judaica GN=PRO1 PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.618e-13
Identity = 34/45 (75.56%), Postives = 39/45 (86.67%), Query Frame = 1
Query:   82 MSWQTYVDDHLMCDI-DGHHLTSAAIVGHDGSVWAQSSNFPQVIP 213
            MSWQ YVDDHLMCD+ DG+   SAAI+GHDGSVWAQS+NFPQ+ P
Sbjct:    1 MSWQAYVDDHLMCDVGDGNTPASAAIIGHDGSVWAQSANFPQLKP 45          
BLAST of EY711199 vs. ExPASy Swiss-Prot
Match: PROF_APIGR (Profilin OS=Apium graveolens PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.466e-13
Identity = 33/47 (70.21%), Postives = 40/47 (85.11%), Query Frame = 1
Query:   82 MSWQTYVDDHLMCDIDGHH---LTSAAIVGHDGSVWAQSSNFPQVIP 213
            MSWQ YVDDHLMC+++G+    LT+AAI+GHDGSVWAQSS FPQ+ P
Sbjct:    1 MSWQAYVDDHLMCEVEGNPGQTLTAAAIIGHDGSVWAQSSTFPQIKP 47          
The following BLAST results are available for this feature:
BLAST of EY711199 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 72
Match NameE-valueIdentityDescription
PROF_BRANA6.891e-1477.27Profilin OS=Brassica napus PE=2 SV=1[more]
PROF2_SOLLC6.891e-1472.73Profilin-2 OS=Solanum lycopersicum PE=1 SV=1[more]
PROF2_ARATH6.891e-1475.00Profilin-2 OS=Arabidopsis thaliana GN=PRO2 PE=1 SV... [more]
PROF1_SOLLC8.999e-1481.40Profilin-1 OS=Solanum lycopersicum GN=PRO1 PE=2 SV... [more]
PROF1_PHAVU1.175e-1372.73Profilin-1 OS=Phaseolus vulgaris PE=1 SV=1[more]
PROF1_TOBAC2.005e-1374.47Profilin-1 OS=Nicotiana tabacum GN=PRO1 PE=2 SV=1[more]
PROF_ARAHY2.618e-1372.73Profilin OS=Arachis hypogaea PE=1 SV=1[more]
PROF2_MAIZE2.618e-1373.17Profilin-2 OS=Zea mays GN=PRO2 PE=2 SV=2[more]
PROF1_PARJU2.618e-1375.56Profilin-1 OS=Parietaria judaica GN=PRO1 PE=1 SV=1[more]
PROF_APIGR4.466e-1370.21Profilin OS=Apium graveolens PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-005-A04-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY711199 ID=EY711199; Name=EY711199; organism=Citrus sinensis; type=EST; length=875bp
CCACGCGTCCGCGAGGGGAAGGAATTAACATAGGAATTAAACAAACAATT
GAATTTGCCGTGAGAATTTAGATTGTTGAAAATGTCGTGGCAAACATACG
TTGATGATCATCTGATGTGCGATATCGACGGCCATCATCTCACCTCAGCT
GCGATCGTCGGTCACGACGGCAGCGTTTGGGCCCAGAGCTCCAATTTCCC
TCAGGTTATACCAAATCTCTCTTGTTTATCTCTTCGATTTTATTTACCGA
TCTGTTATTAATTTATTGTTACGTTCCATTTTCTAATTGCACGGATCTGA
TTGTTCCAATTTTTATTTTTTTTGGCTTAATTGATAATTATTAGCATTCA
GATTAGTTTGTTGCCATGATTTGAATCAAAAGTAAAAATGAAAATGTTAG
ATTTACGTTTTTAGATTGTAAAAATTAAGAATTTTACTGAAAACCAGAAT
AAATTATGAAACTGTAAGTATAAAAATCAAAACTTGTATATGATGATATA
GGTTGTATTTGCTTGTGGCTTTACAATGACCATTTCGTAATTCACTATTA
ATCTTGAGAAAATTATAGAATTTTCAAATAAAAAATAGATAAAAAAAAAT
GTGTTGCTAATGTTAAGACTGTCAAGGGCATGTTTGTTAATGTTGAGTTT
CTGATAATTTTGCAAACACACAGCTAAGTGNTTATGAGCACTCAGTCTCT
AATGATTCCATTCCACACAGCTGTGGCTTAAAAGCATATCTCCTCATTCC
AAGATAATTAAATGATTTGGAGATTTTTATTTTTGGGTTTCATATGCAAT
TTATTGGTTTGTTCCAGAATTTTTGTTGNAAATGCTATCAGGAACTTTCT
CAATCTCAAATACAAATTTATTTNC
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